RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 STRCP1A6NGW2 1772 aa23.35■■□□□ 1.33
CCDC90B-215ENST00000529745 TXNDC2Q86VQ3 553 aa23.33■■□□□ 1.33
CCDC90B-215ENST00000529745 STAG3Q9UJ98 1225 aa23.33■■□□□ 1.33
CCDC90B-215ENST00000529745 EID1Q9Y6B2 187 aa23.33■■□□□ 1.33
CCDC90B-215ENST00000529745 ZFYVE9O95405 1425 aa23.33■■□□□ 1.32
CCDC90B-215ENST00000529745 ALKQ9UM73 1620 aa23.3■■□□□ 1.32
CCDC90B-215ENST00000529745 TRPM2O94759 1503 aa23.29■■□□□ 1.32
CCDC90B-215ENST00000529745 CLTCL1P53675 1640 aa23.25■■□□□ 1.31
CCDC90B-215ENST00000529745 RIMS2Q9UQ26 1411 aa23.25■■□□□ 1.31
CCDC90B-215ENST00000529745 KIF1BO60333 1816 aa23.24■■□□□ 1.31
CCDC90B-215ENST00000529745 RGS17Q9UGC6 210 aaPredicted RBP23.23■■□□□ 1.31
CCDC90B-215ENST00000529745 ACIN1Q9UKV3 1341 aaKnown RBP23.22■■□□□ 1.31
CCDC90B-215ENST00000529745 PLEKHG1Q9ULL1 1385 aa23.22■■□□□ 1.31
CCDC90B-215ENST00000529745 HDGFP51858 240 aaKnown RBP23.21■■□□□ 1.31
CCDC90B-215ENST00000529745 LRRC7Q96NW7 1537 aa23.21■■□□□ 1.31
CCDC90B-215ENST00000529745 NWD1Q149M9 1564 aa23.21■■□□□ 1.31
CCDC90B-215ENST00000529745 XIRP1Q702N8 1843 aaKnown RBP23.21■■□□□ 1.31
CCDC90B-215ENST00000529745 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.19■■□□□ 1.3
CCDC90B-215ENST00000529745 CHD2O14647 1828 aaKnown RBP23.19■■□□□ 1.3
CCDC90B-215ENST00000529745 DIP2AQ14689 1571 aa23.18■■□□□ 1.3
CCDC90B-215ENST00000529745 TRIM52Q96A61 297 aa23.17■■□□□ 1.3
CCDC90B-215ENST00000529745 SETD5Q9C0A6 1442 aa23.16■■□□□ 1.3
CCDC90B-215ENST00000529745 SLC4A1APQ9BWU0 796 aaKnown RBP23.15■■□□□ 1.3
CCDC90B-215ENST00000529745 NKTRP30414 1462 aaKnown RBP23.13■■□□□ 1.29
CCDC90B-215ENST00000529745 CHGAP10645 457 aaKnown RBP23.13■■□□□ 1.29
CCDC90B-215ENST00000529745 NEXMIFQ5QGS0 1516 aa23.13■■□□□ 1.29
CCDC90B-215ENST00000529745 NRXN3Q9Y4C0 1643 aa23.11■■□□□ 1.29
CCDC90B-215ENST00000529745 SETBP1Q9Y6X0 1596 aa23.11■■□□□ 1.29
CCDC90B-215ENST00000529745 ADAMTS13Q76LX8 1427 aa23.11■■□□□ 1.29
CCDC90B-215ENST00000529745 KCNA6P17658 529 aa23.11■■□□□ 1.29
CCDC90B-215ENST00000529745 SLC26A8Q96RN1 970 aa23.1■■□□□ 1.29
CCDC90B-215ENST00000529745 TBX22Q9Y458 520 aa23.1■■□□□ 1.29
CCDC90B-215ENST00000529745 PPP1R15AO75807 674 aaPredicted RBP23.09■■□□□ 1.29
CCDC90B-215ENST00000529745 PIK3R4Q99570 1358 aa23.09■■□□□ 1.29
CCDC90B-215ENST00000529745 PPLO60437 1756 aa23.06■■□□□ 1.28
CCDC90B-215ENST00000529745 FOXD1Q16676 465 aa23.06■■□□□ 1.28
CCDC90B-215ENST00000529745 MPHOSPH9Q99550 1183 aa23.06■■□□□ 1.28
CCDC90B-215ENST00000529745 RAB3GAP2Q9H2M9 1393 aa23.05■■□□□ 1.28
CCDC90B-215ENST00000529745 POTEAQ6S8J7 498 aa23.04■■□□□ 1.28
CCDC90B-215ENST00000529745 IFT172Q9UG01 1749 aa23.02■■□□□ 1.28
CCDC90B-215ENST00000529745 HRCP23327 699 aa23.02■■□□□ 1.28
CCDC90B-215ENST00000529745 BCANQ96GW7 911 aa23.01■■□□□ 1.27
CCDC90B-215ENST00000529745 SETD1AO15047 1707 aaKnown RBP23.01■■□□□ 1.27
CCDC90B-215ENST00000529745 XRN1Q8IZH2 1706 aaKnown RBP23.01■■□□□ 1.27
CCDC90B-215ENST00000529745 ZNF326Q5BKZ1 582 aaKnown RBP23■■□□□ 1.27
CCDC90B-215ENST00000529745 RPGRIP1LQ68CZ1 1315 aa23■■□□□ 1.27
CCDC90B-215ENST00000529745 TMEM94Q12767 1356 aa23■■□□□ 1.27
CCDC90B-215ENST00000529745 CCDC144AA2RUR9 1427 aa22.99■■□□□ 1.27
CCDC90B-215ENST00000529745 NCOA3Q9Y6Q9 1424 aa22.99■■□□□ 1.27
CCDC90B-215ENST00000529745 NUTM2DQ5VT03 806 aaPredicted RBP22.99■■□□□ 1.27
CCDC90B-215ENST00000529745 SPATA31E1Q6ZUB1 1445 aa22.97■■□□□ 1.27
CCDC90B-215ENST00000529745 PROSER2Q86WR7 435 aaPredicted RBP22.95■■□□□ 1.26
CCDC90B-215ENST00000529745 PTPRUQ92729 1446 aa22.95■■□□□ 1.26
CCDC90B-215ENST00000529745 VGFO15240 615 aaPredicted RBP22.93■■□□□ 1.26
CCDC90B-215ENST00000529745 PRAG1Q86YV5 1406 aa22.9■■□□□ 1.26
CCDC90B-215ENST00000529745 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.89■■□□□ 1.26
CCDC90B-215ENST00000529745 METP08581 1390 aa22.89■■□□□ 1.25
CCDC90B-215ENST00000529745 MSH6P52701 1360 aa22.89■■□□□ 1.25
CCDC90B-215ENST00000529745 FAM135BQ49AJ0 1406 aa22.88■■□□□ 1.25
CCDC90B-215ENST00000529745 ANKRD30BQ9BXX2 1392 aa22.88■■□□□ 1.25
CCDC90B-215ENST00000529745 AMOTL2Q9Y2J4 779 aa22.87■■□□□ 1.25
CCDC90B-215ENST00000529745 ROBO1Q9Y6N7 1651 aa22.85■■□□□ 1.25
CCDC90B-215ENST00000529745 DCCP43146 1447 aa22.82■■□□□ 1.24
CCDC90B-215ENST00000529745 RBM33Q96EV2 1170 aaKnown RBP22.82■■□□□ 1.24
CCDC90B-215ENST00000529745 PTCH1Q13635 1447 aa22.82■■□□□ 1.24
CCDC90B-215ENST00000529745 MYOM2P54296 1465 aa22.81■■□□□ 1.24
CCDC90B-215ENST00000529745 NRXN1Q9ULB1 1477 aa22.8■■□□□ 1.24
CCDC90B-215ENST00000529745 NALCNQ8IZF0 1738 aa22.8■■□□□ 1.24
CCDC90B-215ENST00000529745 LAMC1P11047 1609 aa22.8■■□□□ 1.24
CCDC90B-215ENST00000529745 SRCAPQ6ZRS2 3230 aa22.8■■□□□ 1.24
CCDC90B-215ENST00000529745 PIK3C2GO75747 1445 aa22.8■■□□□ 1.24
CCDC90B-215ENST00000529745 C19orf44Q9H6X5 657 aa22.79■■□□□ 1.24
CCDC90B-215ENST00000529745 KNDC1Q76NI1 1749 aa22.79■■□□□ 1.24
CCDC90B-215ENST00000529745 ADGRF5Q8IZF2 1346 aa22.78■■□□□ 1.24
CCDC90B-215ENST00000529745 RGL3Q3MIN7 710 aa22.77■■□□□ 1.24
CCDC90B-215ENST00000529745 UPF1Q92900 1129 aaKnown RBP eCLIP22.77■■□□□ 1.24
CCDC90B-215ENST00000529745 ASXL1Q8IXJ9 1541 aa22.76■■□□□ 1.23
CCDC90B-215ENST00000529745 ADGRL3Q9HAR2 1447 aa22.75■■□□□ 1.23
CCDC90B-215ENST00000529745 CADPS2Q86UW7 1296 aa22.75■■□□□ 1.23
CCDC90B-215ENST00000529745 SLAIN2Q9P270 581 aa22.75■■□□□ 1.23
CCDC90B-215ENST00000529745 TECPR2O15040 1411 aa22.74■■□□□ 1.23
CCDC90B-215ENST00000529745 PHLPP1O60346 1717 aa22.71■■□□□ 1.23
CCDC90B-215ENST00000529745 C14orf37Q86TY3 774 aa22.7■■□□□ 1.22
CCDC90B-215ENST00000529745 ROBO2Q9HCK4 1378 aa22.7■■□□□ 1.22
CCDC90B-215ENST00000529745 AHDC1Q5TGY3 1603 aaPredicted RBP22.7■■□□□ 1.22
CCDC90B-215ENST00000529745 ATF3P18847 181 aa22.69■■□□□ 1.22
CCDC90B-215ENST00000529745 MST1RQ04912 1400 aa22.68■■□□□ 1.22
CCDC90B-215ENST00000529745 LRPPRCP42704 1394 aaKnown RBP22.68■■□□□ 1.22
CCDC90B-215ENST00000529745 STAC3Q96MF2 364 aa22.68■■□□□ 1.22
CCDC90B-215ENST00000529745 COL16A1Q07092 1604 aaPredicted RBP22.68■■□□□ 1.22
CCDC90B-215ENST00000529745 ABCC11Q96J66 1382 aa22.67■■□□□ 1.22
CCDC90B-215ENST00000529745 C14orf93Q9H972 538 aaKnown RBP22.66■■□□□ 1.22
CCDC90B-215ENST00000529745 NHSL1Q5SYE7 1610 aa22.66■■□□□ 1.22
CCDC90B-215ENST00000529745 CDC42BPGQ6DT37 1551 aa22.65■■□□□ 1.22
CCDC90B-215ENST00000529745 YTHDC2Q9H6S0 1430 aaKnown RBP22.64■■□□□ 1.21
CCDC90B-215ENST00000529745 DHX57Q6P158 1386 aaKnown RBP22.62■■□□□ 1.21
CCDC90B-215ENST00000529745 ADGRB1O14514 1584 aa22.61■■□□□ 1.21
CCDC90B-215ENST00000529745 SIRT1Q96EB6 747 aa22.61■■□□□ 1.21
CCDC90B-215ENST00000529745 JCADQ9P266 1359 aa22.61■■□□□ 1.21
CCDC90B-215ENST00000529745 DLC1Q96QB1 1528 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms