RNA–Protein interactions for RNA: ENST00000529714.5

SMCO4-205, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 3

Gene SMCO4, Length 355 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-205ENST00000529714 STAC3Q96MF2 364 aa19.72■□□□□ 0.75
SMCO4-205ENST00000529714 RGL3Q3MIN7 710 aa19.71■□□□□ 0.75
SMCO4-205ENST00000529714 ZNF326Q5BKZ1 582 aaKnown RBP19.71■□□□□ 0.75
SMCO4-205ENST00000529714 RIMS2Q9UQ26 1411 aa19.7■□□□□ 0.74
SMCO4-205ENST00000529714 MYOM2P54296 1465 aa19.69■□□□□ 0.74
SMCO4-205ENST00000529714 HDGFP51858 240 aaKnown RBP19.69■□□□□ 0.74
SMCO4-205ENST00000529714 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.68■□□□□ 0.74
SMCO4-205ENST00000529714 L3MBTL2Q969R5 705 aa19.68■□□□□ 0.74
SMCO4-205ENST00000529714 SCAF11Q99590 1463 aaKnown RBP19.66■□□□□ 0.74
SMCO4-205ENST00000529714 VGFO15240 615 aaPredicted RBP19.65■□□□□ 0.74
SMCO4-205ENST00000529714 EID1Q9Y6B2 187 aa19.65■□□□□ 0.74
SMCO4-205ENST00000529714 NRXN1Q9ULB1 1477 aa19.65■□□□□ 0.74
SMCO4-205ENST00000529714 POLR1AO95602 1720 aaPredicted RBP19.65■□□□□ 0.74
SMCO4-205ENST00000529714 DCAF11Q8TEB1 546 aa19.64■□□□□ 0.73
SMCO4-205ENST00000529714 AEBP2Q6ZN18 517 aaPredicted RBP19.62■□□□□ 0.73
SMCO4-205ENST00000529714 TXNDC2Q86VQ3 553 aa19.62■□□□□ 0.73
SMCO4-205ENST00000529714 ANKLE2Q86XL3 938 aa19.62■□□□□ 0.73
SMCO4-205ENST00000529714 MED14O60244 1454 aa19.6■□□□□ 0.73
SMCO4-205ENST00000529714 PLEKHG1Q9ULL1 1385 aa19.6■□□□□ 0.73
SMCO4-205ENST00000529714 PPP1R15AO75807 674 aaPredicted RBP19.6■□□□□ 0.73
SMCO4-205ENST00000529714 LTKP29376 864 aa19.6■□□□□ 0.73
SMCO4-205ENST00000529714 ZEB1P37275 1124 aaPredicted RBP19.6■□□□□ 0.73
SMCO4-205ENST00000529714 SETBP1Q9Y6X0 1596 aa19.6■□□□□ 0.73
SMCO4-205ENST00000529714 PIK3C2GO75747 1445 aa19.59■□□□□ 0.73
SMCO4-205ENST00000529714 PRAG1Q86YV5 1406 aa19.59■□□□□ 0.73
SMCO4-205ENST00000529714 HSPA2P54652 639 aa19.59■□□□□ 0.73
SMCO4-205ENST00000529714 ADGRF5Q8IZF2 1346 aa19.58■□□□□ 0.73
SMCO4-205ENST00000529714 KDM2AQ9Y2K7 1162 aa19.58■□□□□ 0.72
SMCO4-205ENST00000529714 LAMC1P11047 1609 aa19.58■□□□□ 0.72
SMCO4-205ENST00000529714 KIAA1210Q9ULL0 1709 aa19.57■□□□□ 0.72
SMCO4-205ENST00000529714 NRXN3Q9Y4C0 1643 aa19.56■□□□□ 0.72
SMCO4-205ENST00000529714 NUTM2DQ5VT03 806 aaPredicted RBP19.56■□□□□ 0.72
SMCO4-205ENST00000529714 STRCQ7RTU9 1775 aa19.56■□□□□ 0.72
SMCO4-205ENST00000529714 IQGAP1P46940 1657 aa19.56■□□□□ 0.72
SMCO4-205ENST00000529714 NPHP4O75161 1426 aaPredicted RBP19.55■□□□□ 0.72
SMCO4-205ENST00000529714 DIP2AQ14689 1571 aa19.55■□□□□ 0.72
SMCO4-205ENST00000529714 TRPM1Q7Z4N2 1603 aa19.53■□□□□ 0.72
SMCO4-205ENST00000529714 NCKAP5LQ9HCH0 1330 aa19.52■□□□□ 0.72
SMCO4-205ENST00000529714 ALKQ9UM73 1620 aa19.52■□□□□ 0.72
SMCO4-205ENST00000529714 SETD1AO15047 1707 aaKnown RBP19.52■□□□□ 0.72
SMCO4-205ENST00000529714 ADAMTS13Q76LX8 1427 aa19.51■□□□□ 0.71
SMCO4-205ENST00000529714 C14orf93Q9H972 538 aaKnown RBP19.51■□□□□ 0.71
SMCO4-205ENST00000529714 RALGAPBQ86X10 1494 aa19.5■□□□□ 0.71
SMCO4-205ENST00000529714 NBPF8Q3BBV2 869 aa19.5■□□□□ 0.71
SMCO4-205ENST00000529714 TBX22Q9Y458 520 aa19.48■□□□□ 0.71
SMCO4-205ENST00000529714 BCANQ96GW7 911 aa19.47■□□□□ 0.71
SMCO4-205ENST00000529714 DMRT2Q9Y5R5 561 aa19.47■□□□□ 0.71
SMCO4-205ENST00000529714 PIK3R4Q99570 1358 aa19.46■□□□□ 0.71
SMCO4-205ENST00000529714 ADGRB1O14514 1584 aa19.46■□□□□ 0.71
SMCO4-205ENST00000529714 CFAP70Q5T0N1 1121 aa19.46■□□□□ 0.71
SMCO4-205ENST00000529714 GPRASP1Q5JY77 1395 aa19.45■□□□□ 0.7
SMCO4-205ENST00000529714 ASXL1Q8IXJ9 1541 aa19.45■□□□□ 0.7
SMCO4-205ENST00000529714 SLC26A8Q96RN1 970 aa19.43■□□□□ 0.7
SMCO4-205ENST00000529714 ROCK2O75116 1388 aaKnown RBP19.43■□□□□ 0.7
SMCO4-205ENST00000529714 SENP3Q9H4L4 574 aaPredicted RBP19.41■□□□□ 0.7
SMCO4-205ENST00000529714 METP08581 1390 aa19.41■□□□□ 0.7
SMCO4-205ENST00000529714 CHD2O14647 1828 aaKnown RBP19.4■□□□□ 0.7
SMCO4-205ENST00000529714 NBPF1Q3BBV0 1214 aa19.4■□□□□ 0.7
SMCO4-205ENST00000529714 LRPPRCP42704 1394 aaKnown RBP19.39■□□□□ 0.69
SMCO4-205ENST00000529714 YTHDC2Q9H6S0 1430 aaKnown RBP19.39■□□□□ 0.69
SMCO4-205ENST00000529714 NWD1Q149M9 1564 aa19.39■□□□□ 0.69
SMCO4-205ENST00000529714 KNDC1Q76NI1 1749 aa19.39■□□□□ 0.69
SMCO4-205ENST00000529714 XRN1Q8IZH2 1706 aaKnown RBP19.39■□□□□ 0.69
SMCO4-205ENST00000529714 TECPR2O15040 1411 aa19.37■□□□□ 0.69
SMCO4-205ENST00000529714 TMEM132EQ6IEE7 984 aa19.37■□□□□ 0.69
SMCO4-205ENST00000529714 ABCC11Q96J66 1382 aa19.36■□□□□ 0.69
SMCO4-205ENST00000529714 CARD11Q9BXL7 1154 aa19.36■□□□□ 0.69
SMCO4-205ENST00000529714 DLC1Q96QB1 1528 aa19.35■□□□□ 0.69
SMCO4-205ENST00000529714 PTPRUQ92729 1446 aa19.35■□□□□ 0.69
SMCO4-205ENST00000529714 CPS1P31327 1500 aa19.35■□□□□ 0.69
SMCO4-205ENST00000529714 PTCH1Q13635 1447 aa19.34■□□□□ 0.69
SMCO4-205ENST00000529714 KCNA6P17658 529 aa19.33■□□□□ 0.68
SMCO4-205ENST00000529714 ARHGEF28Q8N1W1 1705 aaKnown RBP19.33■□□□□ 0.68
SMCO4-205ENST00000529714 NKTRP30414 1462 aaKnown RBP19.33■□□□□ 0.68
SMCO4-205ENST00000529714 SIRT1Q96EB6 747 aa19.32■□□□□ 0.68
SMCO4-205ENST00000529714 AMOTL2Q9Y2J4 779 aa19.32■□□□□ 0.68
SMCO4-205ENST00000529714 FAM135BQ49AJ0 1406 aa19.32■□□□□ 0.68
SMCO4-205ENST00000529714 EIF3AQ14152 1382 aaKnown RBP19.32■□□□□ 0.68
SMCO4-205ENST00000529714 STRCP1A6NGW2 1772 aa19.3■□□□□ 0.68
SMCO4-205ENST00000529714 USP47Q96K76 1375 aa19.3■□□□□ 0.68
SMCO4-205ENST00000529714 STK26Q9P289 416 aa19.29■□□□□ 0.68
SMCO4-205ENST00000529714 TRAK1Q9UPV9 953 aa19.28■□□□□ 0.68
SMCO4-205ENST00000529714 ROBO2Q9HCK4 1378 aa19.27■□□□□ 0.68
SMCO4-205ENST00000529714 EIF4G2P78344 907 aaKnown RBP eCLIP19.26■□□□□ 0.67
SMCO4-205ENST00000529714 ZNF335Q9H4Z2 1342 aaPredicted RBP19.25■□□□□ 0.67
SMCO4-205ENST00000529714 SBNO2Q9Y2G9 1366 aa19.24■□□□□ 0.67
SMCO4-205ENST00000529714 CENPJQ9HC77 1338 aaPredicted RBP19.24■□□□□ 0.67
SMCO4-205ENST00000529714 PRAM1Q96QH2 718 aa19.23■□□□□ 0.67
SMCO4-205ENST00000529714 NCOA3Q9Y6Q9 1424 aa19.23■□□□□ 0.67
SMCO4-205ENST00000529714 QRICH2Q9H0J4 1663 aa19.23■□□□□ 0.67
SMCO4-205ENST00000529714 LTBP4Q8N2S1 1624 aa19.22■□□□□ 0.67
SMCO4-205ENST00000529714 POGKQ9P215 609 aa19.22■□□□□ 0.67
SMCO4-205ENST00000529714 LRRC7Q96NW7 1537 aa19.2■□□□□ 0.66
SMCO4-205ENST00000529714 ST20-MTHFSA0A0A6YYL1 179 aa19.2■□□□□ 0.66
SMCO4-205ENST00000529714 SLC24A1O60721 1099 aa19.2■□□□□ 0.66
SMCO4-205ENST00000529714 PLEKHH1Q9ULM0 1364 aa19.19■□□□□ 0.66
SMCO4-205ENST00000529714 ADGRB2O60241 1585 aa19.19■□□□□ 0.66
SMCO4-205ENST00000529714 HSPA5P11021 654 aaKnown RBP19.19■□□□□ 0.66
SMCO4-205ENST00000529714 WAPLQ7Z5K2 1190 aa19.19■□□□□ 0.66
SMCO4-205ENST00000529714 PROSER2Q86WR7 435 aaPredicted RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms