RNA–Protein interactions for RNA: ENST00000529520.5

GPATCH4-214, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-214ENST00000529520 CHD2O14647 1828 aaKnown RBP12.62□□□□□ -0.39
GPATCH4-214ENST00000529520 RPRD2Q5VT52 1461 aaKnown RBP12.62□□□□□ -0.39
GPATCH4-214ENST00000529520 KCNA6P17658 529 aa12.61□□□□□ -0.39
GPATCH4-214ENST00000529520 IQGAP3Q86VI3 1631 aa12.61□□□□□ -0.39
GPATCH4-214ENST00000529520 ZFYVE9O95405 1425 aa12.61□□□□□ -0.39
GPATCH4-214ENST00000529520 TMEM94Q12767 1356 aa12.6□□□□□ -0.39
GPATCH4-214ENST00000529520 ROCK1Q13464 1354 aa12.6□□□□□ -0.39
GPATCH4-214ENST00000529520 NUTM2DQ5VT03 806 aaPredicted RBP12.6□□□□□ -0.39
GPATCH4-214ENST00000529520 PROSER2Q86WR7 435 aaPredicted RBP12.59□□□□□ -0.39
GPATCH4-214ENST00000529520 BCANQ96GW7 911 aa12.59□□□□□ -0.39
GPATCH4-214ENST00000529520 RIMS2Q9UQ26 1411 aa12.59□□□□□ -0.39
GPATCH4-214ENST00000529520 CHGAP10645 457 aaKnown RBP12.58□□□□□ -0.4
GPATCH4-214ENST00000529520 NWD1Q149M9 1564 aa12.58□□□□□ -0.4
GPATCH4-214ENST00000529520 NUP155O75694 1391 aa12.57□□□□□ -0.4
GPATCH4-214ENST00000529520 ROBO1Q9Y6N7 1651 aa12.56□□□□□ -0.4
GPATCH4-214ENST00000529520 PLEKHG1Q9ULL1 1385 aa12.56□□□□□ -0.4
GPATCH4-214ENST00000529520 FAM135BQ49AJ0 1406 aa12.54□□□□□ -0.4
GPATCH4-214ENST00000529520 PPP1R15AO75807 674 aaPredicted RBP12.54□□□□□ -0.4
GPATCH4-214ENST00000529520 SPHKAPQ2M3C7 1700 aa12.54□□□□□ -0.4
GPATCH4-214ENST00000529520 ADAMTS13Q76LX8 1427 aa12.54□□□□□ -0.4
GPATCH4-214ENST00000529520 RGS17Q9UGC6 210 aaPredicted RBP12.53□□□□□ -0.4
GPATCH4-214ENST00000529520 TBX22Q9Y458 520 aa12.53□□□□□ -0.4
GPATCH4-214ENST00000529520 NKTRP30414 1462 aaKnown RBP12.53□□□□□ -0.4
GPATCH4-214ENST00000529520 HDGFP51858 240 aaKnown RBP12.51□□□□□ -0.41
GPATCH4-214ENST00000529520 PHF23Q9BUL5 403 aaPredicted RBP12.51□□□□□ -0.41
GPATCH4-214ENST00000529520 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.5□□□□□ -0.41
GPATCH4-214ENST00000529520 PTPRUQ92729 1446 aa12.5□□□□□ -0.41
GPATCH4-214ENST00000529520 RRBP1Q9P2E9 1410 aaKnown RBP12.5□□□□□ -0.41
GPATCH4-214ENST00000529520 NRXN3Q9Y4C0 1643 aa12.5□□□□□ -0.41
GPATCH4-214ENST00000529520 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.5□□□□□ -0.41
GPATCH4-214ENST00000529520 PHLPP1O60346 1717 aa12.49□□□□□ -0.41
GPATCH4-214ENST00000529520 MSH6P52701 1360 aa12.49□□□□□ -0.41
GPATCH4-214ENST00000529520 SLAIN2Q9P270 581 aa12.49□□□□□ -0.41
GPATCH4-214ENST00000529520 CLTCL1P53675 1640 aa12.48□□□□□ -0.41
GPATCH4-214ENST00000529520 NAIPQ13075 1403 aa12.48□□□□□ -0.41
GPATCH4-214ENST00000529520 KIF1BO60333 1816 aa12.47□□□□□ -0.41
GPATCH4-214ENST00000529520 AMOTL2Q9Y2J4 779 aa12.47□□□□□ -0.41
GPATCH4-214ENST00000529520 DIP2AQ14689 1571 aa12.47□□□□□ -0.41
GPATCH4-214ENST00000529520 ZNF326Q5BKZ1 582 aaKnown RBP12.45□□□□□ -0.42
GPATCH4-214ENST00000529520 TRPM2O94759 1503 aa12.44□□□□□ -0.42
GPATCH4-214ENST00000529520 NEXMIFQ5QGS0 1516 aa12.44□□□□□ -0.42
GPATCH4-214ENST00000529520 POTEAQ6S8J7 498 aa12.44□□□□□ -0.42
GPATCH4-214ENST00000529520 COL16A1Q07092 1604 aaPredicted RBP12.44□□□□□ -0.42
GPATCH4-214ENST00000529520 METP08581 1390 aa12.43□□□□□ -0.42
GPATCH4-214ENST00000529520 PIK3R4Q99570 1358 aa12.43□□□□□ -0.42
GPATCH4-214ENST00000529520 SETBP1Q9Y6X0 1596 aa12.43□□□□□ -0.42
GPATCH4-214ENST00000529520 XRN1Q8IZH2 1706 aaKnown RBP12.43□□□□□ -0.42
GPATCH4-214ENST00000529520 C14orf37Q86TY3 774 aa12.43□□□□□ -0.42
GPATCH4-214ENST00000529520 NCOA3Q9Y6Q9 1424 aa12.43□□□□□ -0.42
GPATCH4-214ENST00000529520 TRIM52Q96A61 297 aa12.42□□□□□ -0.42
GPATCH4-214ENST00000529520 C19orf44Q9H6X5 657 aa12.42□□□□□ -0.42
GPATCH4-214ENST00000529520 SETD1AO15047 1707 aaKnown RBP12.4□□□□□ -0.42
GPATCH4-214ENST00000529520 ATF3P18847 181 aa12.4□□□□□ -0.42
GPATCH4-214ENST00000529520 FOXD1Q16676 465 aa12.4□□□□□ -0.42
GPATCH4-214ENST00000529520 CADPS2Q86UW7 1296 aa12.4□□□□□ -0.42
GPATCH4-214ENST00000529520 HFM1A2PYH4 1435 aa12.39□□□□□ -0.43
GPATCH4-214ENST00000529520 NALCNQ8IZF0 1738 aa12.38□□□□□ -0.43
GPATCH4-214ENST00000529520 BRINP3Q76B58 766 aa12.38□□□□□ -0.43
GPATCH4-214ENST00000529520 JCADQ9P266 1359 aa12.38□□□□□ -0.43
GPATCH4-214ENST00000529520 PPLO60437 1756 aa12.38□□□□□ -0.43
GPATCH4-214ENST00000529520 LRP6O75581 1613 aa12.37□□□□□ -0.43
GPATCH4-214ENST00000529520 AHDC1Q5TGY3 1603 aaPredicted RBP12.37□□□□□ -0.43
GPATCH4-214ENST00000529520 SLC4A1APQ9BWU0 796 aaKnown RBP12.37□□□□□ -0.43
GPATCH4-214ENST00000529520 DDX17Q92841 729 aaKnown RBP12.36□□□□□ -0.43
GPATCH4-214ENST00000529520 MST1RQ04912 1400 aa12.36□□□□□ -0.43
GPATCH4-214ENST00000529520 SHPRHQ149N8 1683 aa12.35□□□□□ -0.43
GPATCH4-214ENST00000529520 NHSL1Q5SYE7 1610 aa12.35□□□□□ -0.43
GPATCH4-214ENST00000529520 ASXL1Q8IXJ9 1541 aa12.33□□□□□ -0.44
GPATCH4-214ENST00000529520 ROBO2Q9HCK4 1378 aa12.32□□□□□ -0.44
GPATCH4-214ENST00000529520 DCCP43146 1447 aa12.32□□□□□ -0.44
GPATCH4-214ENST00000529520 ADGRL3Q9HAR2 1447 aa12.32□□□□□ -0.44
GPATCH4-214ENST00000529520 VGFO15240 615 aaPredicted RBP12.32□□□□□ -0.44
GPATCH4-214ENST00000529520 NUTM2BA6NNL0 878 aaPredicted RBP12.31□□□□□ -0.44
GPATCH4-214ENST00000529520 NUTM2EB1AL46 878 aaPredicted RBP12.31□□□□□ -0.44
GPATCH4-214ENST00000529520 NUTM2AQ8IVF1 878 aaPredicted RBP12.31□□□□□ -0.44
GPATCH4-214ENST00000529520 MPHOSPH9Q99550 1183 aa12.31□□□□□ -0.44
GPATCH4-214ENST00000529520 SPATA31A6Q5VVP1 1343 aa12.31□□□□□ -0.44
GPATCH4-214ENST00000529520 IFT172Q9UG01 1749 aa12.31□□□□□ -0.44
GPATCH4-214ENST00000529520 RGL3Q3MIN7 710 aa12.3□□□□□ -0.44
GPATCH4-214ENST00000529520 RPGRIP1LQ68CZ1 1315 aa12.3□□□□□ -0.44
GPATCH4-214ENST00000529520 ADGRF5Q8IZF2 1346 aa12.3□□□□□ -0.44
GPATCH4-214ENST00000529520 MEX3CQ5U5Q3 659 aaKnown RBP12.29□□□□□ -0.44
GPATCH4-214ENST00000529520 ORAI2Q96SN7 254 aa12.29□□□□□ -0.44
GPATCH4-214ENST00000529520 SETD5Q9C0A6 1442 aa12.28□□□□□ -0.44
GPATCH4-214ENST00000529520 C1orf167Q5SNV9 1468 aa12.28□□□□□ -0.44
GPATCH4-214ENST00000529520 PTCH1Q13635 1447 aa12.27□□□□□ -0.45
GPATCH4-214ENST00000529520 SPATA31E1Q6ZUB1 1445 aa12.27□□□□□ -0.45
GPATCH4-214ENST00000529520 LRRC59Q96AG4 307 aaKnown RBP12.26□□□□□ -0.45
GPATCH4-214ENST00000529520 LAMC1P11047 1609 aa12.26□□□□□ -0.45
GPATCH4-214ENST00000529520 TMEM132EQ6IEE7 984 aa12.25□□□□□ -0.45
GPATCH4-214ENST00000529520 WAPLQ7Z5K2 1190 aa12.25□□□□□ -0.45
GPATCH4-214ENST00000529520 PNPLA6Q8IY17 1366 aa12.25□□□□□ -0.45
GPATCH4-214ENST00000529520 CCDC144AA2RUR9 1427 aa12.25□□□□□ -0.45
GPATCH4-214ENST00000529520 RGPD8O14715 1765 aaPredicted RBP12.24□□□□□ -0.45
GPATCH4-214ENST00000529520 ZNF772Q68DY9 489 aaPredicted RBP12.24□□□□□ -0.45
GPATCH4-214ENST00000529520 PRAG1Q86YV5 1406 aa12.24□□□□□ -0.45
GPATCH4-214ENST00000529520 STK26Q9P289 416 aa12.24□□□□□ -0.45
GPATCH4-214ENST00000529520 PLEKHH1Q9ULM0 1364 aa12.23□□□□□ -0.45
GPATCH4-214ENST00000529520 AFF2P51816 1311 aa12.23□□□□□ -0.45
GPATCH4-214ENST00000529520 SOS2Q07890 1332 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms