RNA–Protein interactions for RNA: ENST00000529505.1

SMIM19-208, Transcript of small integral membrane protein 19, humanhuman

TSL 3

Gene SMIM19, Length 920 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM19-208ENST00000529505 MYO5BQ9ULV0 1848 aa31.47■■■□□ 2.63
SMIM19-208ENST00000529505 ZFYVE9O95405 1425 aa31.46■■■□□ 2.63
SMIM19-208ENST00000529505 TMEM131LA2VDJ0 1609 aa31.45■■■□□ 2.62
SMIM19-208ENST00000529505 ACIN1Q9UKV3 1341 aaKnown RBP31.45■■■□□ 2.62
SMIM19-208ENST00000529505 NWD1Q149M9 1564 aa31.41■■■□□ 2.62
SMIM19-208ENST00000529505 MED1Q15648 1581 aaPredicted RBP31.4■■■□□ 2.62
SMIM19-208ENST00000529505 SLC26A8Q96RN1 970 aa31.4■■■□□ 2.62
SMIM19-208ENST00000529505 KCNA6P17658 529 aa31.39■■■□□ 2.62
SMIM19-208ENST00000529505 SOCS7O14512 581 aa31.38■■■□□ 2.61
SMIM19-208ENST00000529505 TRIM52Q96A61 297 aa31.38■■■□□ 2.61
SMIM19-208ENST00000529505 RIMS2Q9UQ26 1411 aa31.38■■■□□ 2.61
SMIM19-208ENST00000529505 PLEKHG1Q9ULL1 1385 aa31.37■■■□□ 2.61
SMIM19-208ENST00000529505 NKTRP30414 1462 aaKnown RBP31.36■■■□□ 2.61
SMIM19-208ENST00000529505 TMEM94Q12767 1356 aa31.36■■■□□ 2.61
SMIM19-208ENST00000529505 SETD5Q9C0A6 1442 aa31.34■■■□□ 2.61
SMIM19-208ENST00000529505 HDGFP51858 240 aaKnown RBP31.29■■■□□ 2.6
SMIM19-208ENST00000529505 CHD2O14647 1828 aaKnown RBP31.28■■■□□ 2.6
SMIM19-208ENST00000529505 SLC4A1APQ9BWU0 796 aaKnown RBP31.28■■■□□ 2.6
SMIM19-208ENST00000529505 PPP1R15AO75807 674 aaPredicted RBP31.26■■■□□ 2.59
SMIM19-208ENST00000529505 HRCP23327 699 aa31.26■■■□□ 2.59
SMIM19-208ENST00000529505 PROSER2Q86WR7 435 aaPredicted RBP31.26■■■□□ 2.59
SMIM19-208ENST00000529505 BCANQ96GW7 911 aa31.26■■■□□ 2.59
SMIM19-208ENST00000529505 FAM135BQ49AJ0 1406 aa31.25■■■□□ 2.59
SMIM19-208ENST00000529505 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.25■■■□□ 2.59
SMIM19-208ENST00000529505 CHGAP10645 457 aaKnown RBP31.24■■■□□ 2.59
SMIM19-208ENST00000529505 ADAMTS13Q76LX8 1427 aa31.23■■■□□ 2.59
SMIM19-208ENST00000529505 SPHKAPQ2M3C7 1700 aa31.22■■■□□ 2.59
SMIM19-208ENST00000529505 TBX22Q9Y458 520 aa31.22■■■□□ 2.59
SMIM19-208ENST00000529505 DIP2AQ14689 1571 aa31.22■■■□□ 2.59
SMIM19-208ENST00000529505 RBM33Q96EV2 1170 aaKnown RBP31.21■■■□□ 2.59
SMIM19-208ENST00000529505 MPHOSPH9Q99550 1183 aa31.2■■■□□ 2.59
SMIM19-208ENST00000529505 SENP3Q9H4L4 574 aaPredicted RBP31.2■■■□□ 2.59
SMIM19-208ENST00000529505 RAB3GAP2Q9H2M9 1393 aa31.19■■■□□ 2.58
SMIM19-208ENST00000529505 ROBO1Q9Y6N7 1651 aa31.17■■■□□ 2.58
SMIM19-208ENST00000529505 MSH6P52701 1360 aa31.16■■■□□ 2.58
SMIM19-208ENST00000529505 NUTM2DQ5VT03 806 aaPredicted RBP31.15■■■□□ 2.58
SMIM19-208ENST00000529505 PIK3R4Q99570 1358 aa31.15■■■□□ 2.58
SMIM19-208ENST00000529505 NCOA3Q9Y6Q9 1424 aa31.12■■■□□ 2.57
SMIM19-208ENST00000529505 TRPM2O94759 1503 aa31.09■■■□□ 2.57
SMIM19-208ENST00000529505 NRXN3Q9Y4C0 1643 aa31.09■■■□□ 2.57
SMIM19-208ENST00000529505 CLTCL1P53675 1640 aa31.07■■■□□ 2.56
SMIM19-208ENST00000529505 SETBP1Q9Y6X0 1596 aa31.07■■■□□ 2.56
SMIM19-208ENST00000529505 PHF23Q9BUL5 403 aaPredicted RBP31.06■■■□□ 2.56
SMIM19-208ENST00000529505 SLAIN2Q9P270 581 aa31.04■■■□□ 2.56
SMIM19-208ENST00000529505 PTPRUQ92729 1446 aa31.04■■■□□ 2.56
SMIM19-208ENST00000529505 FOXD1Q16676 465 aa31.03■■■□□ 2.56
SMIM19-208ENST00000529505 NEXMIFQ5QGS0 1516 aa31■■■□□ 2.55
SMIM19-208ENST00000529505 XRN1Q8IZH2 1706 aaKnown RBP31■■■□□ 2.55
SMIM19-208ENST00000529505 SIPA1L2Q9P2F8 1722 aaPredicted RBP31■■■□□ 2.55
SMIM19-208ENST00000529505 KIF1BO60333 1816 aa30.97■■■□□ 2.55
SMIM19-208ENST00000529505 TRIM26Q12899 539 aaPredicted RBP30.97■■■□□ 2.55
SMIM19-208ENST00000529505 AMOTL2Q9Y2J4 779 aa30.97■■■□□ 2.55
SMIM19-208ENST00000529505 PHLPP1O60346 1717 aa30.96■■■□□ 2.55
SMIM19-208ENST00000529505 ZNF326Q5BKZ1 582 aaKnown RBP30.96■■■□□ 2.55
SMIM19-208ENST00000529505 C19orf44Q9H6X5 657 aa30.95■■■□□ 2.55
SMIM19-208ENST00000529505 RGS17Q9UGC6 210 aaPredicted RBP30.94■■■□□ 2.54
SMIM19-208ENST00000529505 C14orf37Q86TY3 774 aa30.93■■■□□ 2.54
SMIM19-208ENST00000529505 CCDC144AA2RUR9 1427 aa30.92■■■□□ 2.54
SMIM19-208ENST00000529505 COL16A1Q07092 1604 aaPredicted RBP30.92■■■□□ 2.54
SMIM19-208ENST00000529505 CADPS2Q86UW7 1296 aa30.92■■■□□ 2.54
SMIM19-208ENST00000529505 RPGRIP1LQ68CZ1 1315 aa30.91■■■□□ 2.54
SMIM19-208ENST00000529505 METP08581 1390 aa30.91■■■□□ 2.54
SMIM19-208ENST00000529505 DCCP43146 1447 aa30.9■■■□□ 2.54
SMIM19-208ENST00000529505 AHDC1Q5TGY3 1603 aaPredicted RBP30.87■■■□□ 2.53
SMIM19-208ENST00000529505 ATF3P18847 181 aa30.87■■■□□ 2.53
SMIM19-208ENST00000529505 JCADQ9P266 1359 aa30.86■■■□□ 2.53
SMIM19-208ENST00000529505 ANKRD30BQ9BXX2 1392 aa30.84■■■□□ 2.53
SMIM19-208ENST00000529505 VGFO15240 615 aaPredicted RBP30.84■■■□□ 2.53
SMIM19-208ENST00000529505 SETD1AO15047 1707 aaKnown RBP30.83■■■□□ 2.53
SMIM19-208ENST00000529505 SPATA31E1Q6ZUB1 1445 aa30.8■■■□□ 2.52
SMIM19-208ENST00000529505 PPLO60437 1756 aa30.78■■■□□ 2.52
SMIM19-208ENST00000529505 ADGRL3Q9HAR2 1447 aa30.78■■■□□ 2.52
SMIM19-208ENST00000529505 MST1RQ04912 1400 aa30.77■■■□□ 2.52
SMIM19-208ENST00000529505 BRINP3Q76B58 766 aa30.77■■■□□ 2.52
SMIM19-208ENST00000529505 NALCNQ8IZF0 1738 aa30.76■■■□□ 2.52
SMIM19-208ENST00000529505 SHPRHQ149N8 1683 aa30.75■■■□□ 2.51
SMIM19-208ENST00000529505 RGL3Q3MIN7 710 aa30.75■■■□□ 2.51
SMIM19-208ENST00000529505 PTCH1Q13635 1447 aa30.74■■■□□ 2.51
SMIM19-208ENST00000529505 PRAG1Q86YV5 1406 aa30.74■■■□□ 2.51
SMIM19-208ENST00000529505 ASXL1Q8IXJ9 1541 aa30.74■■■□□ 2.51
SMIM19-208ENST00000529505 POTEAQ6S8J7 498 aa30.73■■■□□ 2.51
SMIM19-208ENST00000529505 SPATA31A6Q5VVP1 1343 aa30.72■■■□□ 2.51
SMIM19-208ENST00000529505 LRP6O75581 1613 aa30.71■■■□□ 2.51
SMIM19-208ENST00000529505 NHSL1Q5SYE7 1610 aa30.7■■■□□ 2.51
SMIM19-208ENST00000529505 ROBO2Q9HCK4 1378 aa30.66■■■□□ 2.5
SMIM19-208ENST00000529505 IFT172Q9UG01 1749 aa30.62■■■□□ 2.49
SMIM19-208ENST00000529505 STAC3Q96MF2 364 aa30.62■■■□□ 2.49
SMIM19-208ENST00000529505 ADGRF5Q8IZF2 1346 aa30.61■■■□□ 2.49
SMIM19-208ENST00000529505 C1orf167Q5SNV9 1468 aa30.59■■■□□ 2.49
SMIM19-208ENST00000529505 LAMC1P11047 1609 aa30.58■■■□□ 2.49
SMIM19-208ENST00000529505 MEX3CQ5U5Q3 659 aaKnown RBP30.53■■■□□ 2.48
SMIM19-208ENST00000529505 DDX17Q92841 729 aaKnown RBP30.52■■■□□ 2.48
SMIM19-208ENST00000529505 LRRC59Q96AG4 307 aaKnown RBP30.52■■■□□ 2.48
SMIM19-208ENST00000529505 DHX57Q6P158 1386 aaKnown RBP30.52■■■□□ 2.48
SMIM19-208ENST00000529505 TECPR2O15040 1411 aa30.51■■■□□ 2.47
SMIM19-208ENST00000529505 MYOM2P54296 1465 aa30.5■■■□□ 2.47
SMIM19-208ENST00000529505 PIK3C2GO75747 1445 aa30.5■■■□□ 2.47
SMIM19-208ENST00000529505 C14orf93Q9H972 538 aaKnown RBP30.5■■■□□ 2.47
SMIM19-208ENST00000529505 CDC42BPGQ6DT37 1551 aa30.49■■■□□ 2.47
SMIM19-208ENST00000529505 ZNF772Q68DY9 489 aaPredicted RBP30.49■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms