RNA–Protein interactions for RNA: ENST00000529469.1

SOX6-212, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-212ENST00000529469 GPCPD1Q9NPB8 672 aa9.85□□□□□ -0.83
SOX6-212ENST00000529469 PCDH10Q9P2E7 1040 aa9.85□□□□□ -0.83
SOX6-212ENST00000529469 SAMD7Q7Z3H4 446 aa9.84□□□□□ -0.83
SOX6-212ENST00000529469 KDM4CQ9H3R0 1056 aa9.82□□□□□ -0.84
SOX6-212ENST00000529469 DAXXQ9UER7 740 aaPredicted RBP9.82□□□□□ -0.84
SOX6-212ENST00000529469 GOLGA8CPA6NN73 597 aa9.81□□□□□ -0.84
SOX6-212ENST00000529469 FAM217BQ9NTX9 383 aaPredicted RBP9.81□□□□□ -0.84
SOX6-212ENST00000529469 MS4A1P11836 297 aa9.8□□□□□ -0.84
SOX6-212ENST00000529469 ANKK1Q8NFD2 765 aa9.8□□□□□ -0.84
SOX6-212ENST00000529469 WNT2BQ93097 391 aa9.8□□□□□ -0.84
SOX6-212ENST00000529469 RNF40O75150 1001 aa9.79□□□□□ -0.84
SOX6-212ENST00000529469 BCAMP50895 628 aa9.79□□□□□ -0.84
SOX6-212ENST00000529469 LRCH3Q96II8 777 aa9.79□□□□□ -0.84
SOX6-212ENST00000529469 DDX11L8A8MPP1 907 aa9.78□□□□□ -0.84
SOX6-212ENST00000529469 SPNS2Q8IVW8 549 aa9.78□□□□□ -0.84
SOX6-212ENST00000529469 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.78□□□□□ -0.84
SOX6-212ENST00000529469 SSTR3P32745 418 aaPredicted RBP9.77□□□□□ -0.85
SOX6-212ENST00000529469 HDGFP51858 240 aaKnown RBP9.77□□□□□ -0.85
SOX6-212ENST00000529469 KCTD12Q96CX2 325 aaKnown RBP9.77□□□□□ -0.85
SOX6-212ENST00000529469 MYT1LQ9UL68 1186 aa9.77□□□□□ -0.85
SOX6-212ENST00000529469 SOWAHBA6NEL2 793 aa9.76□□□□□ -0.85
SOX6-212ENST00000529469 SULF1Q8IWU6 871 aa9.76□□□□□ -0.85
SOX6-212ENST00000529469 SLF2Q8IX21 1173 aa9.76□□□□□ -0.85
SOX6-212ENST00000529469 SLC10A3P09131 477 aa9.75□□□□□ -0.85
SOX6-212ENST00000529469 CD46P15529 392 aa9.75□□□□□ -0.85
SOX6-212ENST00000529469 THSD4Q6ZMP0 1018 aa9.74□□□□□ -0.85
SOX6-212ENST00000529469 RDH13Q8NBN7 331 aa9.74□□□□□ -0.85
SOX6-212ENST00000529469 FAM117AQ9C073 453 aa9.74□□□□□ -0.85
SOX6-212ENST00000529469 HPS5Q9UPZ3 1129 aa9.73□□□□□ -0.85
SOX6-212ENST00000529469 SLC4A3P48751 1232 aa9.72□□□□□ -0.85
SOX6-212ENST00000529469 BEGAINQ9BUH8 593 aa9.71□□□□□ -0.86
SOX6-212ENST00000529469 PLEKHG3A1L390 1219 aa9.7□□□□□ -0.86
SOX6-212ENST00000529469 CFHP08603 1231 aa9.7□□□□□ -0.86
SOX6-212ENST00000529469 TSR3Q9UJK0 312 aaKnown RBP9.7□□□□□ -0.86
SOX6-212ENST00000529469 IL27Q8NEV9 243 aa9.69□□□□□ -0.86
SOX6-212ENST00000529469 RNF166Q96A37 237 aaPredicted RBP9.69□□□□□ -0.86
SOX6-212ENST00000529469 WBP1LQ9NX94 342 aa9.69□□□□□ -0.86
SOX6-212ENST00000529469 GCGRP47871 477 aa9.68□□□□□ -0.86
SOX6-212ENST00000529469 PPP4CP60510 307 aa9.68□□□□□ -0.86
SOX6-212ENST00000529469 DDRGK1Q96HY6 314 aa9.68□□□□□ -0.86
SOX6-212ENST00000529469 PTPN5P54829 565 aa9.67□□□□□ -0.86
SOX6-212ENST00000529469 RSPH4AQ5TD94 716 aa9.67□□□□□ -0.86
SOX6-212ENST00000529469 APLP1P51693 650 aa9.66□□□□□ -0.86
SOX6-212ENST00000529469 MMRN1Q13201 1228 aa9.66□□□□□ -0.86
SOX6-212ENST00000529469 NECTIN2Q92692 538 aa9.66□□□□□ -0.86
SOX6-212ENST00000529469 SPIRE2Q8WWL2 714 aa9.64□□□□□ -0.87
SOX6-212ENST00000529469 KDM4AO75164 1064 aa9.63□□□□□ -0.87
SOX6-212ENST00000529469 FUT2Q10981 343 aa9.63□□□□□ -0.87
SOX6-212ENST00000529469 KMT5BQ4FZB7 885 aa9.63□□□□□ -0.87
SOX6-212ENST00000529469 TBC1D2Q9BYX2 928 aa9.63□□□□□ -0.87
SOX6-212ENST00000529469 NUTM1Q86Y26 1132 aa9.62□□□□□ -0.87
SOX6-212ENST00000529469 ACTN4O43707 911 aaKnown RBP9.61□□□□□ -0.87
SOX6-212ENST00000529469 MYSM1Q5VVJ2 828 aa9.61□□□□□ -0.87
SOX6-212ENST00000529469 HLA-CQ95604 372 aa9.61□□□□□ -0.87
SOX6-212ENST00000529469 HOXA2O43364 376 aa9.6□□□□□ -0.87
SOX6-212ENST00000529469 PRR14Q9BWN1 585 aa9.6□□□□□ -0.87
SOX6-212ENST00000529469 MOXD2PA6NHM9 499 aa9.59□□□□□ -0.87
SOX6-212ENST00000529469 USP46P62068 366 aa9.59□□□□□ -0.87
SOX6-212ENST00000529469 TMEM132AQ24JP5 1023 aa9.58□□□□□ -0.88
SOX6-212ENST00000529469 PUS10Q3MIT2 529 aaKnown RBP9.58□□□□□ -0.88
SOX6-212ENST00000529469 SH3D19Q5HYK7 790 aa9.58□□□□□ -0.88
SOX6-212ENST00000529469 NYAP1Q6ZVC0 841 aa9.58□□□□□ -0.88
SOX6-212ENST00000529469 HCSTQ9UBK5 93 aa9.58□□□□□ -0.88
SOX6-212ENST00000529469 NDUFV2P19404 249 aa9.57□□□□□ -0.88
SOX6-212ENST00000529469 GUCA2AQ02747 115 aa9.57□□□□□ -0.88
SOX6-212ENST00000529469 DIXDC1Q155Q3 683 aa9.57□□□□□ -0.88
SOX6-212ENST00000529469 RSPH6AQ9H0K4 717 aa9.57□□□□□ -0.88
SOX6-212ENST00000529469 PCDHB3Q9Y5E6 796 aa9.57□□□□□ -0.88
SOX6-212ENST00000529469 ATP6V1AP38606 617 aa9.56□□□□□ -0.88
SOX6-212ENST00000529469 BLOC1S3Q6QNY0 202 aa9.56□□□□□ -0.88
SOX6-212ENST00000529469 POLR3EQ9NVU0 708 aa9.56□□□□□ -0.88
SOX6-212ENST00000529469 LIMD1Q9UGP4 676 aa9.56□□□□□ -0.88
SOX6-212ENST00000529469 CLK2P49760 499 aaKnown RBP9.55□□□□□ -0.88
SOX6-212ENST00000529469 MORN1Q5T089 497 aa9.55□□□□□ -0.88
SOX6-212ENST00000529469 RSBN1LQ6PCB5 846 aaPredicted RBP9.55□□□□□ -0.88
SOX6-212ENST00000529469 COPS2P61201 443 aa9.54□□□□□ -0.88
SOX6-212ENST00000529469 SKIV2LQ15477 1246 aaKnown RBP9.54□□□□□ -0.88
SOX6-212ENST00000529469 RIC3Q7Z5B4 369 aa9.54□□□□□ -0.88
SOX6-212ENST00000529469 SPTLC1O15269 473 aa9.53□□□□□ -0.88
SOX6-212ENST00000529469 FDX1P10109 184 aa9.53□□□□□ -0.88
SOX6-212ENST00000529469 GRIPAP1Q4V328 841 aa9.53□□□□□ -0.88
SOX6-212ENST00000529469 GOPCQ9HD26 462 aa9.53□□□□□ -0.88
SOX6-212ENST00000529469 PCDHGC3Q9UN70 934 aa9.53□□□□□ -0.88
SOX6-212ENST00000529469 SLC27A5Q9Y2P5 690 aa9.53□□□□□ -0.88
SOX6-212ENST00000529469 PROCA1Q8NCQ7 364 aaPredicted RBP9.52□□□□□ -0.89
SOX6-212ENST00000529469 MTRQ99707 1265 aa9.52□□□□□ -0.89
SOX6-212ENST00000529469 GJA5P36382 358 aa9.51□□□□□ -0.89
SOX6-212ENST00000529469 CSPP1Q1MSJ5 1256 aa9.51□□□□□ -0.89
SOX6-212ENST00000529469 PCDHB15Q9Y5E8 787 aa9.51□□□□□ -0.89
SOX6-212ENST00000529469 TJAP1Q5JTD0 557 aa9.5□□□□□ -0.89
SOX6-212ENST00000529469 PCMTD1Q96MG8 357 aaPredicted RBP9.5□□□□□ -0.89
SOX6-212ENST00000529469 NR1I2O75469 434 aa9.49□□□□□ -0.89
SOX6-212ENST00000529469 RNF19BQ6ZMZ0 732 aa9.49□□□□□ -0.89
SOX6-212ENST00000529469 SCUBE3Q8IX30 993 aa9.49□□□□□ -0.89
SOX6-212ENST00000529469 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.49□□□□□ -0.89
SOX6-212ENST00000529469 TLL1O43897 1013 aa9.48□□□□□ -0.89
SOX6-212ENST00000529469 QPCTQ16769 361 aa9.48□□□□□ -0.89
SOX6-212ENST00000529469 FBXO31Q5XUX0 539 aaPredicted RBP9.48□□□□□ -0.89
SOX6-212ENST00000529469 ZNF516Q92618 1163 aa9.48□□□□□ -0.89
SOX6-212ENST00000529469 TUSC1Q2TAM9 212 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms