RNA–Protein interactions for RNA: ENST00000529224.1

SSH3-206, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-206ENST00000529224 XIRP1Q702N8 1843 aaKnown RBP19.77■□□□□ 0.76
SSH3-206ENST00000529224 TMEM131LA2VDJ0 1609 aa19.76■□□□□ 0.75
SSH3-206ENST00000529224 SPHKAPQ2M3C7 1700 aa19.76■□□□□ 0.75
SSH3-206ENST00000529224 SENP3Q9H4L4 574 aaPredicted RBP19.75■□□□□ 0.75
SSH3-206ENST00000529224 HFM1A2PYH4 1435 aa19.75■□□□□ 0.75
SSH3-206ENST00000529224 SLC26A8Q96RN1 970 aa19.73■□□□□ 0.75
SSH3-206ENST00000529224 ZFYVE9O95405 1425 aa19.72■□□□□ 0.75
SSH3-206ENST00000529224 MED1Q15648 1581 aaPredicted RBP19.71■□□□□ 0.75
SSH3-206ENST00000529224 HDGFP51858 240 aaKnown RBP19.69■□□□□ 0.74
SSH3-206ENST00000529224 CHGAP10645 457 aaKnown RBP19.68■□□□□ 0.74
SSH3-206ENST00000529224 NWD1Q149M9 1564 aa19.68■□□□□ 0.74
SSH3-206ENST00000529224 TMEM94Q12767 1356 aa19.68■□□□□ 0.74
SSH3-206ENST00000529224 RIMS2Q9UQ26 1411 aa19.68■□□□□ 0.74
SSH3-206ENST00000529224 KCNA6P17658 529 aa19.67■□□□□ 0.74
SSH3-206ENST00000529224 TRIM52Q96A61 297 aa19.66■□□□□ 0.74
SSH3-206ENST00000529224 KIF1BO60333 1816 aa19.66■□□□□ 0.74
SSH3-206ENST00000529224 RBM33Q96EV2 1170 aaKnown RBP19.65■□□□□ 0.74
SSH3-206ENST00000529224 PLEKHG1Q9ULL1 1385 aa19.65■□□□□ 0.74
SSH3-206ENST00000529224 PPP1R15AO75807 674 aaPredicted RBP19.64■□□□□ 0.73
SSH3-206ENST00000529224 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.64■□□□□ 0.73
SSH3-206ENST00000529224 NKTRP30414 1462 aaKnown RBP19.64■□□□□ 0.73
SSH3-206ENST00000529224 BCANQ96GW7 911 aa19.63■□□□□ 0.73
SSH3-206ENST00000529224 PHF23Q9BUL5 403 aaPredicted RBP19.63■□□□□ 0.73
SSH3-206ENST00000529224 TRPM2O94759 1503 aa19.62■□□□□ 0.73
SSH3-206ENST00000529224 PROSER2Q86WR7 435 aaPredicted RBP19.62■□□□□ 0.73
SSH3-206ENST00000529224 CHD2O14647 1828 aaKnown RBP19.62■□□□□ 0.73
SSH3-206ENST00000529224 CLTCL1P53675 1640 aa19.62■□□□□ 0.73
SSH3-206ENST00000529224 NUTM2DQ5VT03 806 aaPredicted RBP19.59■□□□□ 0.73
SSH3-206ENST00000529224 SLC4A1APQ9BWU0 796 aaKnown RBP19.59■□□□□ 0.73
SSH3-206ENST00000529224 ADAMTS13Q76LX8 1427 aa19.59■□□□□ 0.73
SSH3-206ENST00000529224 FAM135BQ49AJ0 1406 aa19.58■□□□□ 0.72
SSH3-206ENST00000529224 DIP2AQ14689 1571 aa19.57■□□□□ 0.72
SSH3-206ENST00000529224 ROBO1Q9Y6N7 1651 aa19.56■□□□□ 0.72
SSH3-206ENST00000529224 TBX22Q9Y458 520 aa19.55■□□□□ 0.72
SSH3-206ENST00000529224 ACIN1Q9UKV3 1341 aaKnown RBP19.54■□□□□ 0.72
SSH3-206ENST00000529224 ZNF326Q5BKZ1 582 aaKnown RBP19.54■□□□□ 0.72
SSH3-206ENST00000529224 MSH6P52701 1360 aa19.53■□□□□ 0.72
SSH3-206ENST00000529224 SETD5Q9C0A6 1442 aa19.51■□□□□ 0.71
SSH3-206ENST00000529224 NRXN3Q9Y4C0 1643 aa19.51■□□□□ 0.71
SSH3-206ENST00000529224 NEXMIFQ5QGS0 1516 aa19.51■□□□□ 0.71
SSH3-206ENST00000529224 SETBP1Q9Y6X0 1596 aa19.5■□□□□ 0.71
SSH3-206ENST00000529224 PIK3R4Q99570 1358 aa19.5■□□□□ 0.71
SSH3-206ENST00000529224 PTPRUQ92729 1446 aa19.48■□□□□ 0.71
SSH3-206ENST00000529224 MPHOSPH9Q99550 1183 aa19.47■□□□□ 0.71
SSH3-206ENST00000529224 SLAIN2Q9P270 581 aa19.47■□□□□ 0.71
SSH3-206ENST00000529224 PPLO60437 1756 aa19.47■□□□□ 0.71
SSH3-206ENST00000529224 NCOA3Q9Y6Q9 1424 aa19.46■□□□□ 0.71
SSH3-206ENST00000529224 FOXD1Q16676 465 aa19.45■□□□□ 0.7
SSH3-206ENST00000529224 XRN1Q8IZH2 1706 aaKnown RBP19.44■□□□□ 0.7
SSH3-206ENST00000529224 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.44■□□□□ 0.7
SSH3-206ENST00000529224 CCDC144AA2RUR9 1427 aa19.43■□□□□ 0.7
SSH3-206ENST00000529224 RGS17Q9UGC6 210 aaPredicted RBP19.43■□□□□ 0.7
SSH3-206ENST00000529224 AMOTL2Q9Y2J4 779 aa19.43■□□□□ 0.7
SSH3-206ENST00000529224 RPGRIP1LQ68CZ1 1315 aa19.43■□□□□ 0.7
SSH3-206ENST00000529224 RAB3GAP2Q9H2M9 1393 aa19.43■□□□□ 0.7
SSH3-206ENST00000529224 PHLPP1O60346 1717 aa19.42■□□□□ 0.7
SSH3-206ENST00000529224 VGFO15240 615 aaPredicted RBP19.41■□□□□ 0.7
SSH3-206ENST00000529224 C14orf37Q86TY3 774 aa19.41■□□□□ 0.7
SSH3-206ENST00000529224 METP08581 1390 aa19.41■□□□□ 0.7
SSH3-206ENST00000529224 COL16A1Q07092 1604 aaPredicted RBP19.4■□□□□ 0.7
SSH3-206ENST00000529224 C19orf44Q9H6X5 657 aa19.39■□□□□ 0.69
SSH3-206ENST00000529224 SETD1AO15047 1707 aaKnown RBP19.39■□□□□ 0.69
SSH3-206ENST00000529224 IFT172Q9UG01 1749 aa19.38■□□□□ 0.69
SSH3-206ENST00000529224 CADPS2Q86UW7 1296 aa19.37■□□□□ 0.69
SSH3-206ENST00000529224 ATF3P18847 181 aa19.35■□□□□ 0.69
SSH3-206ENST00000529224 AHDC1Q5TGY3 1603 aaPredicted RBP19.35■□□□□ 0.69
SSH3-206ENST00000529224 SPATA31E1Q6ZUB1 1445 aa19.34■□□□□ 0.69
SSH3-206ENST00000529224 JCADQ9P266 1359 aa19.34■□□□□ 0.69
SSH3-206ENST00000529224 DCCP43146 1447 aa19.34■□□□□ 0.69
SSH3-206ENST00000529224 HRCP23327 699 aa19.33■□□□□ 0.68
SSH3-206ENST00000529224 RGL3Q3MIN7 710 aa19.32■□□□□ 0.68
SSH3-206ENST00000529224 ANKRD30BQ9BXX2 1392 aa19.32■□□□□ 0.68
SSH3-206ENST00000529224 POTEAQ6S8J7 498 aa19.31■□□□□ 0.68
SSH3-206ENST00000529224 BRINP3Q76B58 766 aa19.31■□□□□ 0.68
SSH3-206ENST00000529224 NALCNQ8IZF0 1738 aa19.31■□□□□ 0.68
SSH3-206ENST00000529224 MST1RQ04912 1400 aa19.3■□□□□ 0.68
SSH3-206ENST00000529224 LRP6O75581 1613 aa19.29■□□□□ 0.68
SSH3-206ENST00000529224 ADGRL3Q9HAR2 1447 aa19.29■□□□□ 0.68
SSH3-206ENST00000529224 ASXL1Q8IXJ9 1541 aa19.29■□□□□ 0.68
SSH3-206ENST00000529224 SHPRHQ149N8 1683 aa19.27■□□□□ 0.68
SSH3-206ENST00000529224 ADGRF5Q8IZF2 1346 aa19.26■□□□□ 0.67
SSH3-206ENST00000529224 PTCH1Q13635 1447 aa19.26■□□□□ 0.67
SSH3-206ENST00000529224 PRAG1Q86YV5 1406 aa19.25■□□□□ 0.67
SSH3-206ENST00000529224 ROBO2Q9HCK4 1378 aa19.25■□□□□ 0.67
SSH3-206ENST00000529224 NHSL1Q5SYE7 1610 aa19.25■□□□□ 0.67
SSH3-206ENST00000529224 SPATA31A6Q5VVP1 1343 aa19.24■□□□□ 0.67
SSH3-206ENST00000529224 PIK3C2GO75747 1445 aa19.22■□□□□ 0.67
SSH3-206ENST00000529224 KNDC1Q76NI1 1749 aa19.21■□□□□ 0.67
SSH3-206ENST00000529224 LAMC1P11047 1609 aa19.21■□□□□ 0.67
SSH3-206ENST00000529224 MYOM2P54296 1465 aa19.21■□□□□ 0.67
SSH3-206ENST00000529224 DDX17Q92841 729 aaKnown RBP19.19■□□□□ 0.66
SSH3-206ENST00000529224 C1orf167Q5SNV9 1468 aa19.18■□□□□ 0.66
SSH3-206ENST00000529224 NRXN1Q9ULB1 1477 aa19.18■□□□□ 0.66
SSH3-206ENST00000529224 MEX3CQ5U5Q3 659 aaKnown RBP19.18■□□□□ 0.66
SSH3-206ENST00000529224 LRPPRCP42704 1394 aaKnown RBP19.17■□□□□ 0.66
SSH3-206ENST00000529224 TECPR2O15040 1411 aa19.16■□□□□ 0.66
SSH3-206ENST00000529224 NUTM2BA6NNL0 878 aaPredicted RBP19.14■□□□□ 0.65
SSH3-206ENST00000529224 NUTM2EB1AL46 878 aaPredicted RBP19.14■□□□□ 0.65
SSH3-206ENST00000529224 NUTM2AQ8IVF1 878 aaPredicted RBP19.14■□□□□ 0.65
SSH3-206ENST00000529224 C14orf93Q9H972 538 aaKnown RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms