RNA–Protein interactions for RNA: ENST00000529216.1

PABPC4-223, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 317 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-223ENST00000529216 TMEM2Q9UHN6 1383 aa11.78□□□□□ -0.52
PABPC4-223ENST00000529216 ARHGAP23Q9P227 1491 aa11.77□□□□□ -0.52
PABPC4-223ENST00000529216 NRXN1Q9ULB1 1477 aa11.77□□□□□ -0.52
PABPC4-223ENST00000529216 PPP1R15AO75807 674 aaPredicted RBP11.77□□□□□ -0.53
PABPC4-223ENST00000529216 DCAF11Q8TEB1 546 aa11.77□□□□□ -0.53
PABPC4-223ENST00000529216 PRAG1Q86YV5 1406 aa11.77□□□□□ -0.53
PABPC4-223ENST00000529216 RIMS2Q9UQ26 1411 aa11.77□□□□□ -0.53
PABPC4-223ENST00000529216 THEMISQ8N1K5 641 aaPredicted RBP11.76□□□□□ -0.53
PABPC4-223ENST00000529216 IFT172Q9UG01 1749 aa11.76□□□□□ -0.53
PABPC4-223ENST00000529216 VGFO15240 615 aaPredicted RBP11.75□□□□□ -0.53
PABPC4-223ENST00000529216 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.75□□□□□ -0.53
PABPC4-223ENST00000529216 PPLO60437 1756 aa11.74□□□□□ -0.53
PABPC4-223ENST00000529216 CFAP65Q6ZU64 1925 aaKnown RBP11.74□□□□□ -0.53
PABPC4-223ENST00000529216 HDGFP51858 240 aaKnown RBP11.74□□□□□ -0.53
PABPC4-223ENST00000529216 PIK3C2GO75747 1445 aa11.74□□□□□ -0.53
PABPC4-223ENST00000529216 LMTK3Q96Q04 1460 aa11.73□□□□□ -0.53
PABPC4-223ENST00000529216 KDM2AQ9Y2K7 1162 aa11.73□□□□□ -0.53
PABPC4-223ENST00000529216 RALGAPBQ86X10 1494 aa11.72□□□□□ -0.53
PABPC4-223ENST00000529216 SCAF11Q99590 1463 aaKnown RBP11.72□□□□□ -0.53
PABPC4-223ENST00000529216 ADGRF5Q8IZF2 1346 aa11.72□□□□□ -0.53
PABPC4-223ENST00000529216 PLEKHG1Q9ULL1 1385 aa11.71□□□□□ -0.53
PABPC4-223ENST00000529216 NBPF8Q3BBV2 869 aa11.71□□□□□ -0.53
PABPC4-223ENST00000529216 EID1Q9Y6B2 187 aa11.71□□□□□ -0.53
PABPC4-223ENST00000529216 SETBP1Q9Y6X0 1596 aa11.71□□□□□ -0.54
PABPC4-223ENST00000529216 MYO5BQ9ULV0 1848 aa11.7□□□□□ -0.54
PABPC4-223ENST00000529216 SETD1BQ9UPS6 1966 aaKnown RBP11.7□□□□□ -0.54
PABPC4-223ENST00000529216 LAMC1P11047 1609 aa11.69□□□□□ -0.54
PABPC4-223ENST00000529216 LTKP29376 864 aa11.69□□□□□ -0.54
PABPC4-223ENST00000529216 TXNDC2Q86VQ3 553 aa11.69□□□□□ -0.54
PABPC4-223ENST00000529216 GPRASP1Q5JY77 1395 aa11.68□□□□□ -0.54
PABPC4-223ENST00000529216 TRPM1Q7Z4N2 1603 aa11.68□□□□□ -0.54
PABPC4-223ENST00000529216 NUTM2DQ5VT03 806 aaPredicted RBP11.68□□□□□ -0.54
PABPC4-223ENST00000529216 ANKLE2Q86XL3 938 aa11.68□□□□□ -0.54
PABPC4-223ENST00000529216 KIAA1210Q9ULL0 1709 aa11.67□□□□□ -0.54
PABPC4-223ENST00000529216 C14orf93Q9H972 538 aaKnown RBP11.67□□□□□ -0.54
PABPC4-223ENST00000529216 MED14O60244 1454 aa11.67□□□□□ -0.54
PABPC4-223ENST00000529216 DIP2AQ14689 1571 aa11.67□□□□□ -0.54
PABPC4-223ENST00000529216 ROCK2O75116 1388 aaKnown RBP11.67□□□□□ -0.54
PABPC4-223ENST00000529216 NRXN3Q9Y4C0 1643 aa11.66□□□□□ -0.54
PABPC4-223ENST00000529216 ADGRB1O14514 1584 aa11.66□□□□□ -0.54
PABPC4-223ENST00000529216 ALKQ9UM73 1620 aa11.65□□□□□ -0.54
PABPC4-223ENST00000529216 CFAP70Q5T0N1 1121 aa11.65□□□□□ -0.54
PABPC4-223ENST00000529216 ADAMTS13Q76LX8 1427 aa11.65□□□□□ -0.54
PABPC4-223ENST00000529216 NPHP4O75161 1426 aaPredicted RBP11.64□□□□□ -0.55
PABPC4-223ENST00000529216 ASXL1Q8IXJ9 1541 aa11.64□□□□□ -0.55
PABPC4-223ENST00000529216 POLR1AO95602 1720 aaPredicted RBP11.63□□□□□ -0.55
PABPC4-223ENST00000529216 IQGAP1P46940 1657 aa11.63□□□□□ -0.55
PABPC4-223ENST00000529216 HSPA2P54652 639 aa11.63□□□□□ -0.55
PABPC4-223ENST00000529216 NBPF1Q3BBV0 1214 aa11.62□□□□□ -0.55
PABPC4-223ENST00000529216 CARD11Q9BXL7 1154 aa11.62□□□□□ -0.55
PABPC4-223ENST00000529216 SETD1AO15047 1707 aaKnown RBP11.62□□□□□ -0.55
PABPC4-223ENST00000529216 NCKAP5LQ9HCH0 1330 aa11.61□□□□□ -0.55
PABPC4-223ENST00000529216 BCANQ96GW7 911 aa11.61□□□□□ -0.55
PABPC4-223ENST00000529216 TBX22Q9Y458 520 aa11.61□□□□□ -0.55
PABPC4-223ENST00000529216 PIK3R4Q99570 1358 aa11.61□□□□□ -0.55
PABPC4-223ENST00000529216 METP08581 1390 aa11.6□□□□□ -0.55
PABPC4-223ENST00000529216 USP47Q96K76 1375 aa11.6□□□□□ -0.55
PABPC4-223ENST00000529216 YTHDC2Q9H6S0 1430 aaKnown RBP11.6□□□□□ -0.55
PABPC4-223ENST00000529216 LRPPRCP42704 1394 aaKnown RBP11.59□□□□□ -0.55
PABPC4-223ENST00000529216 EIF3AQ14152 1382 aaKnown RBP11.59□□□□□ -0.55
PABPC4-223ENST00000529216 TECPR2O15040 1411 aa11.59□□□□□ -0.55
PABPC4-223ENST00000529216 ABCC11Q96J66 1382 aa11.58□□□□□ -0.56
PABPC4-223ENST00000529216 EIF4G2P78344 907 aaKnown RBP eCLIP11.58□□□□□ -0.56
PABPC4-223ENST00000529216 TMEM132EQ6IEE7 984 aa11.58□□□□□ -0.56
PABPC4-223ENST00000529216 SLC26A8Q96RN1 970 aa11.58□□□□□ -0.56
PABPC4-223ENST00000529216 DLC1Q96QB1 1528 aa11.58□□□□□ -0.56
PABPC4-223ENST00000529216 CPS1P31327 1500 aa11.57□□□□□ -0.56
PABPC4-223ENST00000529216 ADRA2BP18089 450 aa11.57□□□□□ -0.56
PABPC4-223ENST00000529216 PTCH1Q13635 1447 aa11.56□□□□□ -0.56
PABPC4-223ENST00000529216 PTPRUQ92729 1446 aa11.56□□□□□ -0.56
PABPC4-223ENST00000529216 STRCQ7RTU9 1775 aa11.56□□□□□ -0.56
PABPC4-223ENST00000529216 KNDC1Q76NI1 1749 aa11.55□□□□□ -0.56
PABPC4-223ENST00000529216 NWD1Q149M9 1564 aa11.55□□□□□ -0.56
PABPC4-223ENST00000529216 FAM135BQ49AJ0 1406 aa11.55□□□□□ -0.56
PABPC4-223ENST00000529216 HSPA5P11021 654 aaKnown RBP11.55□□□□□ -0.56
PABPC4-223ENST00000529216 XRN1Q8IZH2 1706 aaKnown RBP11.55□□□□□ -0.56
PABPC4-223ENST00000529216 SIRT1Q96EB6 747 aa11.54□□□□□ -0.56
PABPC4-223ENST00000529216 TRAK1Q9UPV9 953 aa11.54□□□□□ -0.56
PABPC4-223ENST00000529216 DMRT2Q9Y5R5 561 aa11.54□□□□□ -0.56
PABPC4-223ENST00000529216 SBNO2Q9Y2G9 1366 aa11.54□□□□□ -0.56
PABPC4-223ENST00000529216 PIAS4Q8N2W9 510 aaPredicted RBP11.53□□□□□ -0.56
PABPC4-223ENST00000529216 CENPJQ9HC77 1338 aaPredicted RBP11.53□□□□□ -0.56
PABPC4-223ENST00000529216 ARHGEF28Q8N1W1 1705 aaKnown RBP11.52□□□□□ -0.56
PABPC4-223ENST00000529216 NKTRP30414 1462 aaKnown RBP11.52□□□□□ -0.56
PABPC4-223ENST00000529216 ST20-MTHFSA0A0A6YYL1 179 aa11.52□□□□□ -0.57
PABPC4-223ENST00000529216 STK26Q9P289 416 aa11.52□□□□□ -0.57
PABPC4-223ENST00000529216 AMOTL2Q9Y2J4 779 aa11.52□□□□□ -0.57
PABPC4-223ENST00000529216 ROBO2Q9HCK4 1378 aa11.52□□□□□ -0.57
PABPC4-223ENST00000529216 KCNA6P17658 529 aa11.51□□□□□ -0.57
PABPC4-223ENST00000529216 SLC24A1O60721 1099 aa11.5□□□□□ -0.57
PABPC4-223ENST00000529216 PRAM1Q96QH2 718 aa11.5□□□□□ -0.57
PABPC4-223ENST00000529216 TESK2Q96S53 571 aa11.5□□□□□ -0.57
PABPC4-223ENST00000529216 ZNF316A6NFI3 1004 aaPredicted RBP11.48□□□□□ -0.57
PABPC4-223ENST00000529216 POGKQ9P215 609 aa11.48□□□□□ -0.57
PABPC4-223ENST00000529216 PLEKHH1Q9ULM0 1364 aa11.48□□□□□ -0.57
PABPC4-223ENST00000529216 CHD2O14647 1828 aaKnown RBP11.48□□□□□ -0.57
PABPC4-223ENST00000529216 QRICH2Q9H0J4 1663 aa11.47□□□□□ -0.57
PABPC4-223ENST00000529216 ADGRB2O60241 1585 aa11.47□□□□□ -0.57
PABPC4-223ENST00000529216 HIRIP3Q9BW71 556 aaPredicted RBP11.47□□□□□ -0.57
PABPC4-223ENST00000529216 NCOA3Q9Y6Q9 1424 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms