RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 LMTK2Q8IWU2 1503 aa29.97■■■□□ 2.39
SSRP1-204ENST00000529002 CHD2O14647 1828 aaKnown RBP29.97■■■□□ 2.39
SSRP1-204ENST00000529002 NOS1P29475 1434 aa29.96■■■□□ 2.39
SSRP1-204ENST00000529002 JCADQ9P266 1359 aa29.95■■■□□ 2.39
SSRP1-204ENST00000529002 COL16A1Q07092 1604 aaPredicted RBP29.94■■■□□ 2.38
SSRP1-204ENST00000529002 LRP6O75581 1613 aa29.92■■■□□ 2.38
SSRP1-204ENST00000529002 GCC2Q8IWJ2 1684 aa29.88■■■□□ 2.37
SSRP1-204ENST00000529002 ANKRD30AQ9BXX3 1397 aa29.87■■■□□ 2.37
SSRP1-204ENST00000529002 ZFYVE9O95405 1425 aa29.86■■■□□ 2.37
SSRP1-204ENST00000529002 TRIM52Q96A61 297 aa29.85■■■□□ 2.37
SSRP1-204ENST00000529002 SLC52A1Q9NWF4 448 aa29.84■■■□□ 2.37
SSRP1-204ENST00000529002 FGD6Q6ZV73 1430 aa29.84■■■□□ 2.37
SSRP1-204ENST00000529002 PLEKHG1Q9ULL1 1385 aa29.83■■■□□ 2.37
SSRP1-204ENST00000529002 UPF1Q92900 1129 aaKnown RBP eCLIP29.83■■■□□ 2.37
SSRP1-204ENST00000529002 RIMS2Q9UQ26 1411 aa29.82■■■□□ 2.36
SSRP1-204ENST00000529002 MEX3CQ5U5Q3 659 aaKnown RBP29.81■■■□□ 2.36
SSRP1-204ENST00000529002 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.8■■■□□ 2.36
SSRP1-204ENST00000529002 PPP1R15AO75807 674 aaPredicted RBP29.8■■■□□ 2.36
SSRP1-204ENST00000529002 TMEM131LA2VDJ0 1609 aa29.79■■■□□ 2.36
SSRP1-204ENST00000529002 NUTM2DQ5VT03 806 aaPredicted RBP29.79■■■□□ 2.36
SSRP1-204ENST00000529002 C14orf37Q86TY3 774 aa29.79■■■□□ 2.36
SSRP1-204ENST00000529002 SHPRHQ149N8 1683 aa29.76■■■□□ 2.35
SSRP1-204ENST00000529002 SPATA31A6Q5VVP1 1343 aa29.75■■■□□ 2.35
SSRP1-204ENST00000529002 ZNF772Q68DY9 489 aaPredicted RBP29.74■■■□□ 2.35
SSRP1-204ENST00000529002 AHDC1Q5TGY3 1603 aaPredicted RBP29.74■■■□□ 2.35
SSRP1-204ENST00000529002 CHGAP10645 457 aaKnown RBP29.73■■■□□ 2.35
SSRP1-204ENST00000529002 TBX22Q9Y458 520 aa29.73■■■□□ 2.35
SSRP1-204ENST00000529002 ADAMTS13Q76LX8 1427 aa29.72■■■□□ 2.35
SSRP1-204ENST00000529002 RPRD2Q5VT52 1461 aaKnown RBP29.72■■■□□ 2.35
SSRP1-204ENST00000529002 ADGRL2O95490 1459 aa29.7■■■□□ 2.35
SSRP1-204ENST00000529002 NUTM2BA6NNL0 878 aaPredicted RBP29.7■■■□□ 2.35
SSRP1-204ENST00000529002 NUTM2EB1AL46 878 aaPredicted RBP29.7■■■□□ 2.35
SSRP1-204ENST00000529002 NUTM2AQ8IVF1 878 aaPredicted RBP29.7■■■□□ 2.35
SSRP1-204ENST00000529002 APLP2Q06481 763 aa29.69■■■□□ 2.34
SSRP1-204ENST00000529002 NCOA3Q9Y6Q9 1424 aa29.68■■■□□ 2.34
SSRP1-204ENST00000529002 ATF3P18847 181 aa29.67■■■□□ 2.34
SSRP1-204ENST00000529002 HDGFP51858 240 aaKnown RBP29.67■■■□□ 2.34
SSRP1-204ENST00000529002 C19orf44Q9H6X5 657 aa29.67■■■□□ 2.34
SSRP1-204ENST00000529002 ANKRD50Q9ULJ7 1429 aa29.67■■■□□ 2.34
SSRP1-204ENST00000529002 DIP2AQ14689 1571 aa29.67■■■□□ 2.34
SSRP1-204ENST00000529002 CADPS2Q86UW7 1296 aa29.66■■■□□ 2.34
SSRP1-204ENST00000529002 RXRBP28702 533 aa29.65■■■□□ 2.34
SSRP1-204ENST00000529002 E9PCH4 1651 aa29.64■■■□□ 2.34
SSRP1-204ENST00000529002 BRINP3Q76B58 766 aa29.64■■■□□ 2.34
SSRP1-204ENST00000529002 FAM50AQ14320 339 aaKnown RBP29.63■■■□□ 2.33
SSRP1-204ENST00000529002 PTPRUQ92729 1446 aa29.62■■■□□ 2.33
SSRP1-204ENST00000529002 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.61■■■□□ 2.33
SSRP1-204ENST00000529002 AMOTL2Q9Y2J4 779 aa29.6■■■□□ 2.33
SSRP1-204ENST00000529002 AFF2P51816 1311 aa29.59■■■□□ 2.33
SSRP1-204ENST00000529002 UNC13BO14795 1591 aa29.57■■■□□ 2.32
SSRP1-204ENST00000529002 TRPM2O94759 1503 aa29.55■■■□□ 2.32
SSRP1-204ENST00000529002 PIK3R4Q99570 1358 aa29.55■■■□□ 2.32
SSRP1-204ENST00000529002 ASXL1Q8IXJ9 1541 aa29.55■■■□□ 2.32
SSRP1-204ENST00000529002 CDK12Q9NYV4 1490 aaPredicted RBP29.54■■■□□ 2.32
SSRP1-204ENST00000529002 NHSL1Q5SYE7 1610 aa29.53■■■□□ 2.32
SSRP1-204ENST00000529002 DDX17Q92841 729 aaKnown RBP29.52■■■□□ 2.32
SSRP1-204ENST00000529002 NRXN3Q9Y4C0 1643 aa29.5■■■□□ 2.31
SSRP1-204ENST00000529002 XRN1Q8IZH2 1706 aaKnown RBP29.5■■■□□ 2.31
SSRP1-204ENST00000529002 RGS12O14924 1447 aa29.49■■■□□ 2.31
SSRP1-204ENST00000529002 MST1RQ04912 1400 aa29.49■■■□□ 2.31
SSRP1-204ENST00000529002 SETD5Q9C0A6 1442 aa29.48■■■□□ 2.31
SSRP1-204ENST00000529002 C8orf37Q96NL8 207 aa29.48■■■□□ 2.31
SSRP1-204ENST00000529002 IQGAP3Q86VI3 1631 aa29.45■■■□□ 2.31
SSRP1-204ENST00000529002 QTRT2Q9H974 415 aaKnown RBP29.45■■■□□ 2.31
SSRP1-204ENST00000529002 DCCP43146 1447 aa29.45■■■□□ 2.3
SSRP1-204ENST00000529002 PNPLA6Q8IY17 1366 aa29.41■■■□□ 2.3
SSRP1-204ENST00000529002 LRRC59Q96AG4 307 aaKnown RBP29.41■■■□□ 2.3
SSRP1-204ENST00000529002 RBM6P78332 1123 aaKnown RBP29.4■■■□□ 2.3
SSRP1-204ENST00000529002 METP08581 1390 aa29.39■■■□□ 2.3
SSRP1-204ENST00000529002 NALCNQ8IZF0 1738 aa29.39■■■□□ 2.3
SSRP1-204ENST00000529002 SETBP1Q9Y6X0 1596 aa29.38■■■□□ 2.29
SSRP1-204ENST00000529002 NUP155O75694 1391 aa29.37■■■□□ 2.29
SSRP1-204ENST00000529002 ADAMTS2O95450 1211 aa29.36■■■□□ 2.29
SSRP1-204ENST00000529002 NGLY1Q96IV0 654 aa29.33■■■□□ 2.29
SSRP1-204ENST00000529002 ADGRL3Q9HAR2 1447 aa29.33■■■□□ 2.29
SSRP1-204ENST00000529002 SPHKAPQ2M3C7 1700 aa29.33■■■□□ 2.29
SSRP1-204ENST00000529002 ZNF326Q5BKZ1 582 aaKnown RBP29.32■■■□□ 2.28
SSRP1-204ENST00000529002 SRCAPQ6ZRS2 3230 aa29.27■■■□□ 2.28
SSRP1-204ENST00000529002 ROCK1Q13464 1354 aa29.26■■■□□ 2.28
SSRP1-204ENST00000529002 ITGAEP38570 1179 aa29.26■■■□□ 2.27
SSRP1-204ENST00000529002 C1orf167Q5SNV9 1468 aa29.25■■■□□ 2.27
SSRP1-204ENST00000529002 ORAI2Q96SN7 254 aa29.24■■■□□ 2.27
SSRP1-204ENST00000529002 USP21Q9UK80 565 aa29.23■■■□□ 2.27
SSRP1-204ENST00000529002 NEXMIFQ5QGS0 1516 aa29.22■■■□□ 2.27
SSRP1-204ENST00000529002 ATAD2Q6PL18 1390 aa29.22■■■□□ 2.27
SSRP1-204ENST00000529002 LAMC1P11047 1609 aa29.21■■■□□ 2.27
SSRP1-204ENST00000529002 CLTCL1P53675 1640 aa29.21■■■□□ 2.27
SSRP1-204ENST00000529002 SOS2Q07890 1332 aaPredicted RBP29.18■■■□□ 2.26
SSRP1-204ENST00000529002 TRPC5Q9UL62 973 aaPredicted RBP29.16■■■□□ 2.26
SSRP1-204ENST00000529002 ROBO2Q9HCK4 1378 aa29.15■■■□□ 2.26
SSRP1-204ENST00000529002 KIF1BO60333 1816 aa29.15■■■□□ 2.26
SSRP1-204ENST00000529002 ATRNO75882 1429 aa29.13■■■□□ 2.25
SSRP1-204ENST00000529002 FNBP4Q8N3X1 1017 aaPredicted RBP29.13■■■□□ 2.25
SSRP1-204ENST00000529002 ZRANB1Q9UGI0 708 aa29.11■■■□□ 2.25
SSRP1-204ENST00000529002 PTCH1Q13635 1447 aa29.11■■■□□ 2.25
SSRP1-204ENST00000529002 COL22A1Q8NFW1 1626 aaPredicted RBP29.1■■■□□ 2.25
SSRP1-204ENST00000529002 MARF1Q9Y4F3 1742 aaKnown RBP29.08■■■□□ 2.25
SSRP1-204ENST00000529002 EP400Q96L91 3159 aa29.07■■■□□ 2.24
SSRP1-204ENST00000529002 PPARGC1BQ86YN6 1023 aaKnown RBP29.05■■■□□ 2.24
SSRP1-204ENST00000529002 BCL9LQ86UU0 1499 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms