RNA–Protein interactions for RNA: ENST00000528895.5

TM9SF1-207, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-207ENST00000528895 STAC3Q96MF2 364 aa16.87■□□□□ 0.29
TM9SF1-207ENST00000528895 DMRT2Q9Y5R5 561 aa16.87■□□□□ 0.29
TM9SF1-207ENST00000528895 IFT172Q9UG01 1749 aa16.87■□□□□ 0.29
TM9SF1-207ENST00000528895 MYOM2P54296 1465 aa16.86■□□□□ 0.29
TM9SF1-207ENST00000528895 ZNF326Q5BKZ1 582 aaKnown RBP16.86■□□□□ 0.29
TM9SF1-207ENST00000528895 DCAF11Q8TEB1 546 aa16.86■□□□□ 0.29
TM9SF1-207ENST00000528895 STAG3Q9UJ98 1225 aa16.86■□□□□ 0.29
TM9SF1-207ENST00000528895 RPGRIP1LQ68CZ1 1315 aa16.85■□□□□ 0.29
TM9SF1-207ENST00000528895 PPLO60437 1756 aa16.84■□□□□ 0.29
TM9SF1-207ENST00000528895 A2ML1A8K2U0 1454 aa16.83■□□□□ 0.28
TM9SF1-207ENST00000528895 NEXMIFQ5QGS0 1516 aa16.83■□□□□ 0.28
TM9SF1-207ENST00000528895 UBR1Q8IWV7 1749 aa16.82■□□□□ 0.28
TM9SF1-207ENST00000528895 ZNF142P52746 1687 aaPredicted RBP16.82■□□□□ 0.28
TM9SF1-207ENST00000528895 PRAG1Q86YV5 1406 aa16.82■□□□□ 0.28
TM9SF1-207ENST00000528895 KDM2AQ9Y2K7 1162 aa16.81■□□□□ 0.28
TM9SF1-207ENST00000528895 MYO5BQ9ULV0 1848 aa16.81■□□□□ 0.28
TM9SF1-207ENST00000528895 CEP170BQ9Y4F5 1589 aaPredicted RBP16.81■□□□□ 0.28
TM9SF1-207ENST00000528895 RALGAPBQ86X10 1494 aa16.8■□□□□ 0.28
TM9SF1-207ENST00000528895 LTBP4Q8N2S1 1624 aa16.78■□□□□ 0.28
TM9SF1-207ENST00000528895 NRXN1Q9ULB1 1477 aa16.78■□□□□ 0.28
TM9SF1-207ENST00000528895 TRPM1Q7Z4N2 1603 aa16.78■□□□□ 0.28
TM9SF1-207ENST00000528895 ZFYVE9O95405 1425 aa16.77■□□□□ 0.27
TM9SF1-207ENST00000528895 LAMC1P11047 1609 aa16.77■□□□□ 0.27
TM9SF1-207ENST00000528895 KIAA1210Q9ULL0 1709 aa16.76■□□□□ 0.27
TM9SF1-207ENST00000528895 VGFO15240 615 aaPredicted RBP16.76■□□□□ 0.27
TM9SF1-207ENST00000528895 RIMS2Q9UQ26 1411 aa16.76■□□□□ 0.27
TM9SF1-207ENST00000528895 HDGFP51858 240 aaKnown RBP16.75■□□□□ 0.27
TM9SF1-207ENST00000528895 NBPF8Q3BBV2 869 aa16.75■□□□□ 0.27
TM9SF1-207ENST00000528895 IQSEC2Q5JU85 1478 aa16.74■□□□□ 0.27
TM9SF1-207ENST00000528895 PIK3C2GO75747 1445 aa16.74■□□□□ 0.27
TM9SF1-207ENST00000528895 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.74■□□□□ 0.27
TM9SF1-207ENST00000528895 SLIT1O75093 1534 aa16.74■□□□□ 0.27
TM9SF1-207ENST00000528895 ROCK2O75116 1388 aaKnown RBP16.74■□□□□ 0.27
TM9SF1-207ENST00000528895 DISP3Q9P2K9 1392 aa16.74■□□□□ 0.27
TM9SF1-207ENST00000528895 TMEM2Q9UHN6 1383 aa16.74■□□□□ 0.27
TM9SF1-207ENST00000528895 THEMISQ8N1K5 641 aaPredicted RBP16.71■□□□□ 0.27
TM9SF1-207ENST00000528895 ARHGAP23Q9P227 1491 aa16.71■□□□□ 0.27
TM9SF1-207ENST00000528895 ADGRF5Q8IZF2 1346 aa16.7■□□□□ 0.26
TM9SF1-207ENST00000528895 ILDR2Q71H61 639 aa16.7■□□□□ 0.26
TM9SF1-207ENST00000528895 SETBP1Q9Y6X0 1596 aa16.69■□□□□ 0.26
TM9SF1-207ENST00000528895 GPRASP1Q5JY77 1395 aa16.69■□□□□ 0.26
TM9SF1-207ENST00000528895 EID1Q9Y6B2 187 aa16.68■□□□□ 0.26
TM9SF1-207ENST00000528895 CARD11Q9BXL7 1154 aa16.67■□□□□ 0.26
TM9SF1-207ENST00000528895 SCAF11Q99590 1463 aaKnown RBP16.67■□□□□ 0.26
TM9SF1-207ENST00000528895 NUTM2DQ5VT03 806 aaPredicted RBP16.66■□□□□ 0.26
TM9SF1-207ENST00000528895 EIF4G2P78344 907 aaKnown RBP eCLIP16.65■□□□□ 0.26
TM9SF1-207ENST00000528895 IQGAP1P46940 1657 aa16.65■□□□□ 0.26
TM9SF1-207ENST00000528895 USP47Q96K76 1375 aa16.64■□□□□ 0.26
TM9SF1-207ENST00000528895 PLEKHG1Q9ULL1 1385 aa16.64■□□□□ 0.26
TM9SF1-207ENST00000528895 SOCS7O14512 581 aa16.64■□□□□ 0.25
TM9SF1-207ENST00000528895 DIP2AQ14689 1571 aa16.64■□□□□ 0.25
TM9SF1-207ENST00000528895 EIF3AQ14152 1382 aaKnown RBP16.64■□□□□ 0.25
TM9SF1-207ENST00000528895 C14orf93Q9H972 538 aaKnown RBP16.63■□□□□ 0.25
TM9SF1-207ENST00000528895 ALKQ9UM73 1620 aa16.63■□□□□ 0.25
TM9SF1-207ENST00000528895 CFAP70Q5T0N1 1121 aa16.62■□□□□ 0.25
TM9SF1-207ENST00000528895 TXNDC2Q86VQ3 553 aa16.62■□□□□ 0.25
TM9SF1-207ENST00000528895 ADGRB1O14514 1584 aa16.62■□□□□ 0.25
TM9SF1-207ENST00000528895 NCKAP5LQ9HCH0 1330 aa16.62■□□□□ 0.25
TM9SF1-207ENST00000528895 NRXN3Q9Y4C0 1643 aa16.62■□□□□ 0.25
TM9SF1-207ENST00000528895 POLR1AO95602 1720 aaPredicted RBP16.62■□□□□ 0.25
TM9SF1-207ENST00000528895 ZNF335Q9H4Z2 1342 aaPredicted RBP16.61■□□□□ 0.25
TM9SF1-207ENST00000528895 ZNF316A6NFI3 1004 aaPredicted RBP16.6■□□□□ 0.25
TM9SF1-207ENST00000528895 NBPF1Q3BBV0 1214 aa16.6■□□□□ 0.25
TM9SF1-207ENST00000528895 BCANQ96GW7 911 aa16.6■□□□□ 0.25
TM9SF1-207ENST00000528895 SETD1AO15047 1707 aaKnown RBP16.59■□□□□ 0.25
TM9SF1-207ENST00000528895 ANKLE2Q86XL3 938 aa16.59■□□□□ 0.25
TM9SF1-207ENST00000528895 HSPA5P11021 654 aaKnown RBP16.58■□□□□ 0.24
TM9SF1-207ENST00000528895 ASXL1Q8IXJ9 1541 aa16.58■□□□□ 0.24
TM9SF1-207ENST00000528895 LTKP29376 864 aa16.57■□□□□ 0.24
TM9SF1-207ENST00000528895 ADAMTS13Q76LX8 1427 aa16.55■□□□□ 0.24
TM9SF1-207ENST00000528895 MED14O60244 1454 aa16.54■□□□□ 0.24
TM9SF1-207ENST00000528895 YTHDC2Q9H6S0 1430 aaKnown RBP16.54■□□□□ 0.24
TM9SF1-207ENST00000528895 KNDC1Q76NI1 1749 aa16.54■□□□□ 0.24
TM9SF1-207ENST00000528895 UBAP1LF5GYI3 381 aa16.54■□□□□ 0.24
TM9SF1-207ENST00000528895 NPHP4O75161 1426 aaPredicted RBP16.53■□□□□ 0.24
TM9SF1-207ENST00000528895 ARHGEF28Q8N1W1 1705 aaKnown RBP16.53■□□□□ 0.24
TM9SF1-207ENST00000528895 LRPPRCP42704 1394 aaKnown RBP16.52■□□□□ 0.24
TM9SF1-207ENST00000528895 DLC1Q96QB1 1528 aa16.52■□□□□ 0.24
TM9SF1-207ENST00000528895 TMEM132EQ6IEE7 984 aa16.51■□□□□ 0.23
TM9SF1-207ENST00000528895 PPP4R3CPQ6ZMV5 832 aa16.51■□□□□ 0.23
TM9SF1-207ENST00000528895 CPS1P31327 1500 aa16.5■□□□□ 0.23
TM9SF1-207ENST00000528895 ST20-MTHFSA0A0A6YYL1 179 aa16.5■□□□□ 0.23
TM9SF1-207ENST00000528895 HIRIP3Q9BW71 556 aaPredicted RBP16.5■□□□□ 0.23
TM9SF1-207ENST00000528895 TBX22Q9Y458 520 aa16.5■□□□□ 0.23
TM9SF1-207ENST00000528895 PIK3R4Q99570 1358 aa16.5■□□□□ 0.23
TM9SF1-207ENST00000528895 QRICH2Q9H0J4 1663 aa16.5■□□□□ 0.23
TM9SF1-207ENST00000528895 TECPR2O15040 1411 aa16.49■□□□□ 0.23
TM9SF1-207ENST00000528895 SLC24A1O60721 1099 aa16.49■□□□□ 0.23
TM9SF1-207ENST00000528895 METP08581 1390 aa16.49■□□□□ 0.23
TM9SF1-207ENST00000528895 CENPJQ9HC77 1338 aaPredicted RBP16.48■□□□□ 0.23
TM9SF1-207ENST00000528895 TRAK1Q9UPV9 953 aa16.48■□□□□ 0.23
TM9SF1-207ENST00000528895 SBNO2Q9Y2G9 1366 aa16.48■□□□□ 0.23
TM9SF1-207ENST00000528895 SLC26A8Q96RN1 970 aa16.47■□□□□ 0.23
TM9SF1-207ENST00000528895 STK26Q9P289 416 aa16.47■□□□□ 0.23
TM9SF1-207ENST00000528895 ABCC11Q96J66 1382 aa16.47■□□□□ 0.23
TM9SF1-207ENST00000528895 SCAF1Q9H7N4 1312 aaKnown RBP16.45■□□□□ 0.22
TM9SF1-207ENST00000528895 PTCH1Q13635 1447 aa16.45■□□□□ 0.22
TM9SF1-207ENST00000528895 XRN1Q8IZH2 1706 aaKnown RBP16.45■□□□□ 0.22
TM9SF1-207ENST00000528895 TMF1P82094 1093 aa16.45■□□□□ 0.22
TM9SF1-207ENST00000528895 FAM135BQ49AJ0 1406 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms