RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 ZNF326Q5BKZ1 582 aaKnown RBP17.56■□□□□ 0.4
TRAF3IP2-211ENST00000528599 SLIT1O75093 1534 aa17.56■□□□□ 0.4
TRAF3IP2-211ENST00000528599 TIMELESSQ9UNS1 1208 aa17.55■□□□□ 0.4
TRAF3IP2-211ENST00000528599 TMEM2Q9UHN6 1383 aa17.53■□□□□ 0.4
TRAF3IP2-211ENST00000528599 LTKP29376 864 aa17.53■□□□□ 0.4
TRAF3IP2-211ENST00000528599 DCAF11Q8TEB1 546 aa17.52■□□□□ 0.4
TRAF3IP2-211ENST00000528599 RPGRIP1LQ68CZ1 1315 aa17.52■□□□□ 0.4
TRAF3IP2-211ENST00000528599 NEXMIFQ5QGS0 1516 aa17.51■□□□□ 0.39
TRAF3IP2-211ENST00000528599 MED14O60244 1454 aa17.51■□□□□ 0.39
TRAF3IP2-211ENST00000528599 KDM2AQ9Y2K7 1162 aa17.51■□□□□ 0.39
TRAF3IP2-211ENST00000528599 ZFYVE9O95405 1425 aa17.5■□□□□ 0.39
TRAF3IP2-211ENST00000528599 RIMS2Q9UQ26 1411 aa17.5■□□□□ 0.39
TRAF3IP2-211ENST00000528599 IFT172Q9UG01 1749 aa17.5■□□□□ 0.39
TRAF3IP2-211ENST00000528599 NUTM2DQ5VT03 806 aaPredicted RBP17.5■□□□□ 0.39
TRAF3IP2-211ENST00000528599 ANKLE2Q86XL3 938 aa17.5■□□□□ 0.39
TRAF3IP2-211ENST00000528599 PPLO60437 1756 aa17.5■□□□□ 0.39
TRAF3IP2-211ENST00000528599 SCAF11Q99590 1463 aaKnown RBP17.5■□□□□ 0.39
TRAF3IP2-211ENST00000528599 IQGAP1P46940 1657 aa17.49■□□□□ 0.39
TRAF3IP2-211ENST00000528599 PPP1R15AO75807 674 aaPredicted RBP17.48■□□□□ 0.39
TRAF3IP2-211ENST00000528599 NPHP4O75161 1426 aaPredicted RBP17.47■□□□□ 0.39
TRAF3IP2-211ENST00000528599 ADGRF5Q8IZF2 1346 aa17.47■□□□□ 0.39
TRAF3IP2-211ENST00000528599 DMRT2Q9Y5R5 561 aa17.47■□□□□ 0.39
TRAF3IP2-211ENST00000528599 MYOM2P54296 1465 aa17.46■□□□□ 0.39
TRAF3IP2-211ENST00000528599 ZEB1P37275 1124 aaPredicted RBP17.46■□□□□ 0.39
TRAF3IP2-211ENST00000528599 TXNDC2Q86VQ3 553 aa17.46■□□□□ 0.39
TRAF3IP2-211ENST00000528599 VGFO15240 615 aaPredicted RBP17.45■□□□□ 0.38
TRAF3IP2-211ENST00000528599 STAC3Q96MF2 364 aa17.45■□□□□ 0.38
TRAF3IP2-211ENST00000528599 NBPF8Q3BBV2 869 aa17.45■□□□□ 0.38
TRAF3IP2-211ENST00000528599 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.45■□□□□ 0.38
TRAF3IP2-211ENST00000528599 NRXN1Q9ULB1 1477 aa17.44■□□□□ 0.38
TRAF3IP2-211ENST00000528599 HDGFP51858 240 aaKnown RBP17.43■□□□□ 0.38
TRAF3IP2-211ENST00000528599 EID1Q9Y6B2 187 aa17.43■□□□□ 0.38
TRAF3IP2-211ENST00000528599 PRAG1Q86YV5 1406 aa17.43■□□□□ 0.38
TRAF3IP2-211ENST00000528599 LTBP4Q8N2S1 1624 aa17.43■□□□□ 0.38
TRAF3IP2-211ENST00000528599 ZNF335Q9H4Z2 1342 aaPredicted RBP17.43■□□□□ 0.38
TRAF3IP2-211ENST00000528599 SENP3Q9H4L4 574 aaPredicted RBP17.42■□□□□ 0.38
TRAF3IP2-211ENST00000528599 PIK3C2GO75747 1445 aa17.4■□□□□ 0.38
TRAF3IP2-211ENST00000528599 STRCP1A6NGW2 1772 aa17.4■□□□□ 0.38
TRAF3IP2-211ENST00000528599 PLEKHG1Q9ULL1 1385 aa17.38■□□□□ 0.37
TRAF3IP2-211ENST00000528599 CFAP70Q5T0N1 1121 aa17.37■□□□□ 0.37
TRAF3IP2-211ENST00000528599 NRXN3Q9Y4C0 1643 aa17.37■□□□□ 0.37
TRAF3IP2-211ENST00000528599 SETBP1Q9Y6X0 1596 aa17.36■□□□□ 0.37
TRAF3IP2-211ENST00000528599 SLC26A8Q96RN1 970 aa17.36■□□□□ 0.37
TRAF3IP2-211ENST00000528599 C14orf93Q9H972 538 aaKnown RBP17.36■□□□□ 0.37
TRAF3IP2-211ENST00000528599 NBPF1Q3BBV0 1214 aa17.35■□□□□ 0.37
TRAF3IP2-211ENST00000528599 BCANQ96GW7 911 aa17.35■□□□□ 0.37
TRAF3IP2-211ENST00000528599 ADAMTS13Q76LX8 1427 aa17.35■□□□□ 0.37
TRAF3IP2-211ENST00000528599 TRPM1Q7Z4N2 1603 aa17.34■□□□□ 0.37
TRAF3IP2-211ENST00000528599 ALKQ9UM73 1620 aa17.34■□□□□ 0.37
TRAF3IP2-211ENST00000528599 RALGAPBQ86X10 1494 aa17.33■□□□□ 0.36
TRAF3IP2-211ENST00000528599 KIAA1210Q9ULL0 1709 aa17.32■□□□□ 0.36
TRAF3IP2-211ENST00000528599 SETD1AO15047 1707 aaKnown RBP17.31■□□□□ 0.36
TRAF3IP2-211ENST00000528599 LAMC1P11047 1609 aa17.3■□□□□ 0.36
TRAF3IP2-211ENST00000528599 TMEM132EQ6IEE7 984 aa17.3■□□□□ 0.36
TRAF3IP2-211ENST00000528599 CERKQ8TCT0 537 aa17.3■□□□□ 0.36
TRAF3IP2-211ENST00000528599 ASXL1Q8IXJ9 1541 aa17.3■□□□□ 0.36
TRAF3IP2-211ENST00000528599 TBX22Q9Y458 520 aa17.29■□□□□ 0.36
TRAF3IP2-211ENST00000528599 ROCK2O75116 1388 aaKnown RBP17.29■□□□□ 0.36
TRAF3IP2-211ENST00000528599 ADGRB1O14514 1584 aa17.29■□□□□ 0.36
TRAF3IP2-211ENST00000528599 FBXO41Q8TF61 875 aa17.29■□□□□ 0.36
TRAF3IP2-211ENST00000528599 METP08581 1390 aa17.29■□□□□ 0.36
TRAF3IP2-211ENST00000528599 GPRASP1Q5JY77 1395 aa17.29■□□□□ 0.36
TRAF3IP2-211ENST00000528599 CHD2O14647 1828 aaKnown RBP17.27■□□□□ 0.36
TRAF3IP2-211ENST00000528599 DIP2AQ14689 1571 aa17.27■□□□□ 0.36
TRAF3IP2-211ENST00000528599 NWD1Q149M9 1564 aa17.27■□□□□ 0.36
TRAF3IP2-211ENST00000528599 CPS1P31327 1500 aa17.27■□□□□ 0.36
TRAF3IP2-211ENST00000528599 XIRP1Q702N8 1843 aaKnown RBP17.26■□□□□ 0.35
TRAF3IP2-211ENST00000528599 CARD11Q9BXL7 1154 aa17.26■□□□□ 0.35
TRAF3IP2-211ENST00000528599 LRRC7Q96NW7 1537 aa17.25■□□□□ 0.35
TRAF3IP2-211ENST00000528599 PTPRUQ92729 1446 aa17.25■□□□□ 0.35
TRAF3IP2-211ENST00000528599 STK26Q9P289 416 aa17.23■□□□□ 0.35
TRAF3IP2-211ENST00000528599 YTHDC2Q9H6S0 1430 aaKnown RBP17.22■□□□□ 0.35
TRAF3IP2-211ENST00000528599 KCNA6P17658 529 aa17.22■□□□□ 0.35
TRAF3IP2-211ENST00000528599 LRPPRCP42704 1394 aaKnown RBP17.22■□□□□ 0.35
TRAF3IP2-211ENST00000528599 RBM33Q96EV2 1170 aaKnown RBP17.21■□□□□ 0.35
TRAF3IP2-211ENST00000528599 PIK3R4Q99570 1358 aa17.21■□□□□ 0.35
TRAF3IP2-211ENST00000528599 IQSEC2Q5JU85 1478 aa17.21■□□□□ 0.34
TRAF3IP2-211ENST00000528599 XRN1Q8IZH2 1706 aaKnown RBP17.21■□□□□ 0.34
TRAF3IP2-211ENST00000528599 TRAK1Q9UPV9 953 aa17.2■□□□□ 0.34
TRAF3IP2-211ENST00000528599 ABCC11Q96J66 1382 aa17.19■□□□□ 0.34
TRAF3IP2-211ENST00000528599 NKTRP30414 1462 aaKnown RBP17.19■□□□□ 0.34
TRAF3IP2-211ENST00000528599 AMOTL2Q9Y2J4 779 aa17.19■□□□□ 0.34
TRAF3IP2-211ENST00000528599 USP47Q96K76 1375 aa17.19■□□□□ 0.34
TRAF3IP2-211ENST00000528599 TECPR2O15040 1411 aa17.17■□□□□ 0.34
TRAF3IP2-211ENST00000528599 TMEM94Q12767 1356 aa17.17■□□□□ 0.34
TRAF3IP2-211ENST00000528599 HSPA5P11021 654 aaKnown RBP17.16■□□□□ 0.34
TRAF3IP2-211ENST00000528599 EIF4G2P78344 907 aaKnown RBP eCLIP17.16■□□□□ 0.34
TRAF3IP2-211ENST00000528599 KNDC1Q76NI1 1749 aa17.15■□□□□ 0.34
TRAF3IP2-211ENST00000528599 ROBO2Q9HCK4 1378 aa17.15■□□□□ 0.34
TRAF3IP2-211ENST00000528599 ARHGEF28Q8N1W1 1705 aaKnown RBP17.15■□□□□ 0.34
TRAF3IP2-211ENST00000528599 DLC1Q96QB1 1528 aa17.14■□□□□ 0.34
TRAF3IP2-211ENST00000528599 ST20-MTHFSA0A0A6YYL1 179 aa17.14■□□□□ 0.33
TRAF3IP2-211ENST00000528599 HIRIP3Q9BW71 556 aaPredicted RBP17.14■□□□□ 0.33
TRAF3IP2-211ENST00000528599 WAPLQ7Z5K2 1190 aa17.13■□□□□ 0.33
TRAF3IP2-211ENST00000528599 PROSER2Q86WR7 435 aaPredicted RBP17.13■□□□□ 0.33
TRAF3IP2-211ENST00000528599 SIRT1Q96EB6 747 aa17.13■□□□□ 0.33
TRAF3IP2-211ENST00000528599 PRAM1Q96QH2 718 aa17.13■□□□□ 0.33
TRAF3IP2-211ENST00000528599 EIF3AQ14152 1382 aaKnown RBP17.12■□□□□ 0.33
TRAF3IP2-211ENST00000528599 PLEKHH1Q9ULM0 1364 aa17.12■□□□□ 0.33
TRAF3IP2-211ENST00000528599 PTCH1Q13635 1447 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms