RNA–Protein interactions for RNA: ENST00000528488.5

C11orf49-215, Transcript of chromosome 11 open reading frame 49, humanhuman

TSL 2

Gene C11orf49, Length 1,623 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-215ENST00000528488 RIMS2Q9UQ26 1411 aa29.16■■■□□ 2.26
C11orf49-215ENST00000528488 ZEB1P37275 1124 aaPredicted RBP29.15■■■□□ 2.26
C11orf49-215ENST00000528488 TMEM2Q9UHN6 1383 aa29.15■■■□□ 2.26
C11orf49-215ENST00000528488 SLIT1O75093 1534 aa29.15■■■□□ 2.26
C11orf49-215ENST00000528488 ZFYVE9O95405 1425 aa29.14■■■□□ 2.26
C11orf49-215ENST00000528488 ARHGAP23Q9P227 1491 aa29.13■■■□□ 2.25
C11orf49-215ENST00000528488 MYOM2P54296 1465 aa29.12■■■□□ 2.25
C11orf49-215ENST00000528488 NUTM2DQ5VT03 806 aaPredicted RBP29.12■■■□□ 2.25
C11orf49-215ENST00000528488 LMTK3Q96Q04 1460 aa29.12■■■□□ 2.25
C11orf49-215ENST00000528488 PPP1R15AO75807 674 aaPredicted RBP29.09■■■□□ 2.25
C11orf49-215ENST00000528488 ADGRF5Q8IZF2 1346 aa29.07■■■□□ 2.24
C11orf49-215ENST00000528488 STAC3Q96MF2 364 aa29.06■■■□□ 2.24
C11orf49-215ENST00000528488 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.05■■■□□ 2.24
C11orf49-215ENST00000528488 PRAG1Q86YV5 1406 aa29.05■■■□□ 2.24
C11orf49-215ENST00000528488 POLR1AO95602 1720 aaPredicted RBP29.05■■■□□ 2.24
C11orf49-215ENST00000528488 NRXN1Q9ULB1 1477 aa29.05■■■□□ 2.24
C11orf49-215ENST00000528488 VGFO15240 615 aaPredicted RBP29.05■■■□□ 2.24
C11orf49-215ENST00000528488 HDGFP51858 240 aaKnown RBP29.04■■■□□ 2.24
C11orf49-215ENST00000528488 LTKP29376 864 aa29.03■■■□□ 2.24
C11orf49-215ENST00000528488 NBPF8Q3BBV2 869 aa29.02■■■□□ 2.24
C11orf49-215ENST00000528488 TXNDC2Q86VQ3 553 aa29.02■■■□□ 2.24
C11orf49-215ENST00000528488 EID1Q9Y6B2 187 aa29.02■■■□□ 2.24
C11orf49-215ENST00000528488 SCAF11Q99590 1463 aaKnown RBP29.02■■■□□ 2.24
C11orf49-215ENST00000528488 HSPA2P54652 639 aa29.01■■■□□ 2.23
C11orf49-215ENST00000528488 PIK3C2GO75747 1445 aa28.99■■■□□ 2.23
C11orf49-215ENST00000528488 IQGAP1P46940 1657 aa28.99■■■□□ 2.23
C11orf49-215ENST00000528488 TRPM1Q7Z4N2 1603 aa28.99■■■□□ 2.23
C11orf49-215ENST00000528488 SENP3Q9H4L4 574 aaPredicted RBP28.98■■■□□ 2.23
C11orf49-215ENST00000528488 ANKLE2Q86XL3 938 aa28.98■■■□□ 2.23
C11orf49-215ENST00000528488 NRXN3Q9Y4C0 1643 aa28.97■■■□□ 2.23
C11orf49-215ENST00000528488 KIAA1210Q9ULL0 1709 aa28.97■■■□□ 2.23
C11orf49-215ENST00000528488 PLEKHG1Q9ULL1 1385 aa28.95■■■□□ 2.22
C11orf49-215ENST00000528488 SETBP1Q9Y6X0 1596 aa28.94■■■□□ 2.22
C11orf49-215ENST00000528488 LAMC1P11047 1609 aa28.94■■■□□ 2.22
C11orf49-215ENST00000528488 STRCQ7RTU9 1775 aa28.92■■■□□ 2.22
C11orf49-215ENST00000528488 NCKAP5LQ9HCH0 1330 aa28.92■■■□□ 2.22
C11orf49-215ENST00000528488 SETD1AO15047 1707 aaKnown RBP28.92■■■□□ 2.22
C11orf49-215ENST00000528488 RALGAPBQ86X10 1494 aa28.91■■■□□ 2.22
C11orf49-215ENST00000528488 ALKQ9UM73 1620 aa28.91■■■□□ 2.22
C11orf49-215ENST00000528488 AEBP2Q6ZN18 517 aaPredicted RBP28.91■■■□□ 2.22
C11orf49-215ENST00000528488 BCANQ96GW7 911 aa28.9■■■□□ 2.22
C11orf49-215ENST00000528488 CFAP70Q5T0N1 1121 aa28.89■■■□□ 2.22
C11orf49-215ENST00000528488 MED14O60244 1454 aa28.88■■■□□ 2.21
C11orf49-215ENST00000528488 NPHP4O75161 1426 aaPredicted RBP28.87■■■□□ 2.21
C11orf49-215ENST00000528488 C14orf93Q9H972 538 aaKnown RBP28.87■■■□□ 2.21
C11orf49-215ENST00000528488 ADAMTS13Q76LX8 1427 aa28.86■■■□□ 2.21
C11orf49-215ENST00000528488 NBPF1Q3BBV0 1214 aa28.84■■■□□ 2.21
C11orf49-215ENST00000528488 DIP2AQ14689 1571 aa28.84■■■□□ 2.21
C11orf49-215ENST00000528488 ROCK2O75116 1388 aaKnown RBP28.83■■■□□ 2.21
C11orf49-215ENST00000528488 ASXL1Q8IXJ9 1541 aa28.83■■■□□ 2.21
C11orf49-215ENST00000528488 ADGRB1O14514 1584 aa28.81■■■□□ 2.2
C11orf49-215ENST00000528488 SLC26A8Q96RN1 970 aa28.81■■■□□ 2.2
C11orf49-215ENST00000528488 GPRASP1Q5JY77 1395 aa28.79■■■□□ 2.2
C11orf49-215ENST00000528488 TMEM132EQ6IEE7 984 aa28.77■■■□□ 2.2
C11orf49-215ENST00000528488 METP08581 1390 aa28.76■■■□□ 2.19
C11orf49-215ENST00000528488 CARD11Q9BXL7 1154 aa28.76■■■□□ 2.19
C11orf49-215ENST00000528488 TBX22Q9Y458 520 aa28.76■■■□□ 2.19
C11orf49-215ENST00000528488 CHD2O14647 1828 aaKnown RBP28.71■■■□□ 2.19
C11orf49-215ENST00000528488 YTHDC2Q9H6S0 1430 aaKnown RBP28.7■■■□□ 2.18
C11orf49-215ENST00000528488 KNDC1Q76NI1 1749 aa28.68■■■□□ 2.18
C11orf49-215ENST00000528488 ARHGEF28Q8N1W1 1705 aaKnown RBP28.68■■■□□ 2.18
C11orf49-215ENST00000528488 PTPRUQ92729 1446 aa28.67■■■□□ 2.18
C11orf49-215ENST00000528488 LRPPRCP42704 1394 aaKnown RBP28.67■■■□□ 2.18
C11orf49-215ENST00000528488 STK26Q9P289 416 aa28.66■■■□□ 2.18
C11orf49-215ENST00000528488 PIK3R4Q99570 1358 aa28.66■■■□□ 2.18
C11orf49-215ENST00000528488 XRN1Q8IZH2 1706 aaKnown RBP28.65■■■□□ 2.18
C11orf49-215ENST00000528488 USP47Q96K76 1375 aa28.65■■■□□ 2.18
C11orf49-215ENST00000528488 TRAK1Q9UPV9 953 aa28.64■■■□□ 2.18
C11orf49-215ENST00000528488 DMRT2Q9Y5R5 561 aa28.61■■■□□ 2.17
C11orf49-215ENST00000528488 CPS1P31327 1500 aa28.61■■■□□ 2.17
C11orf49-215ENST00000528488 ABCC11Q96J66 1382 aa28.61■■■□□ 2.17
C11orf49-215ENST00000528488 NWD1Q149M9 1564 aa28.6■■■□□ 2.17
C11orf49-215ENST00000528488 DLC1Q96QB1 1528 aa28.6■■■□□ 2.17
C11orf49-215ENST00000528488 EIF4G2P78344 907 aaKnown RBP eCLIP28.6■■■□□ 2.17
C11orf49-215ENST00000528488 AMOTL2Q9Y2J4 779 aa28.6■■■□□ 2.17
C11orf49-215ENST00000528488 STRCP1A6NGW2 1772 aa28.6■■■□□ 2.17
C11orf49-215ENST00000528488 TECPR2O15040 1411 aa28.59■■■□□ 2.17
C11orf49-215ENST00000528488 HSPA5P11021 654 aaKnown RBP28.58■■■□□ 2.17
C11orf49-215ENST00000528488 EIF3AQ14152 1382 aaKnown RBP28.58■■■□□ 2.17
C11orf49-215ENST00000528488 QRICH2Q9H0J4 1663 aa28.56■■■□□ 2.16
C11orf49-215ENST00000528488 KCNA6P17658 529 aa28.54■■■□□ 2.16
C11orf49-215ENST00000528488 ROBO2Q9HCK4 1378 aa28.53■■■□□ 2.16
C11orf49-215ENST00000528488 PTCH1Q13635 1447 aa28.53■■■□□ 2.16
C11orf49-215ENST00000528488 ST20-MTHFSA0A0A6YYL1 179 aa28.53■■■□□ 2.16
C11orf49-215ENST00000528488 HIRIP3Q9BW71 556 aaPredicted RBP28.53■■■□□ 2.16
C11orf49-215ENST00000528488 FAM135BQ49AJ0 1406 aa28.51■■■□□ 2.15
C11orf49-215ENST00000528488 PRAM1Q96QH2 718 aa28.51■■■□□ 2.15
C11orf49-215ENST00000528488 CENPJQ9HC77 1338 aaPredicted RBP28.5■■■□□ 2.15
C11orf49-215ENST00000528488 PLEKHH1Q9ULM0 1364 aa28.5■■■□□ 2.15
C11orf49-215ENST00000528488 WAPLQ7Z5K2 1190 aa28.49■■■□□ 2.15
C11orf49-215ENST00000528488 SIRT1Q96EB6 747 aa28.49■■■□□ 2.15
C11orf49-215ENST00000528488 POGKQ9P215 609 aa28.49■■■□□ 2.15
C11orf49-215ENST00000528488 NKTRP30414 1462 aaKnown RBP28.49■■■□□ 2.15
C11orf49-215ENST00000528488 ZNF335Q9H4Z2 1342 aaPredicted RBP28.48■■■□□ 2.15
C11orf49-215ENST00000528488 SAFB2Q14151 953 aaKnown RBP eCLIP28.47■■■□□ 2.15
C11orf49-215ENST00000528488 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.45■■■□□ 2.14
C11orf49-215ENST00000528488 TESK2Q96S53 571 aa28.43■■■□□ 2.14
C11orf49-215ENST00000528488 SBNO2Q9Y2G9 1366 aa28.4■■■□□ 2.14
C11orf49-215ENST00000528488 XIRP1Q702N8 1843 aaKnown RBP28.4■■■□□ 2.14
C11orf49-215ENST00000528488 NALCNQ8IZF0 1738 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms