RNA–Protein interactions for RNA: ENST00000528192.5

NDUFS3-206, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 5 BASIC

Gene NDUFS3, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-206ENST00000528192 BCANQ96GW7 911 aa33.95■■■■□ 3.03
NDUFS3-206ENST00000528192 ZFYVE9O95405 1425 aa33.95■■■■□ 3.02
NDUFS3-206ENST00000528192 XIRP1Q702N8 1843 aaKnown RBP33.93■■■■□ 3.02
NDUFS3-206ENST00000528192 RIMS2Q9UQ26 1411 aa33.93■■■■□ 3.02
NDUFS3-206ENST00000528192 PPP1R15AO75807 674 aaPredicted RBP33.92■■■■□ 3.02
NDUFS3-206ENST00000528192 CHGAP10645 457 aaKnown RBP33.92■■■■□ 3.02
NDUFS3-206ENST00000528192 KCNA6P17658 529 aa33.91■■■■□ 3.02
NDUFS3-206ENST00000528192 PLEKHG1Q9ULL1 1385 aa33.89■■■■□ 3.02
NDUFS3-206ENST00000528192 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.87■■■■□ 3.01
NDUFS3-206ENST00000528192 NWD1Q149M9 1564 aa33.85■■■■□ 3.01
NDUFS3-206ENST00000528192 ILDR2Q71H61 639 aa33.84■■■■□ 3.01
NDUFS3-206ENST00000528192 SENP3Q9H4L4 574 aaPredicted RBP33.84■■■■□ 3.01
NDUFS3-206ENST00000528192 TMEM94Q12767 1356 aa33.84■■■■□ 3.01
NDUFS3-206ENST00000528192 NKTRP30414 1462 aaKnown RBP33.82■■■■□ 3.01
NDUFS3-206ENST00000528192 SPHKAPQ2M3C7 1700 aa33.82■■■■□ 3
NDUFS3-206ENST00000528192 PROSER2Q86WR7 435 aaPredicted RBP33.82■■■■□ 3
NDUFS3-206ENST00000528192 NAIPQ13075 1403 aa33.8■■■■□ 3
NDUFS3-206ENST00000528192 CHD2O14647 1828 aaKnown RBP33.77■■■■□ 3
NDUFS3-206ENST00000528192 NUTM2DQ5VT03 806 aaPredicted RBP33.75■■■□□ 2.99
NDUFS3-206ENST00000528192 TBX22Q9Y458 520 aa33.75■■■□□ 2.99
NDUFS3-206ENST00000528192 MED1Q15648 1581 aaPredicted RBP33.73■■■□□ 2.99
NDUFS3-206ENST00000528192 RBM33Q96EV2 1170 aaKnown RBP33.73■■■□□ 2.99
NDUFS3-206ENST00000528192 DIP2AQ14689 1571 aa33.72■■■□□ 2.99
NDUFS3-206ENST00000528192 HFM1A2PYH4 1435 aa33.7■■■□□ 2.99
NDUFS3-206ENST00000528192 ADAMTS13Q76LX8 1427 aa33.69■■■□□ 2.98
NDUFS3-206ENST00000528192 MSH6P52701 1360 aa33.67■■■□□ 2.98
NDUFS3-206ENST00000528192 FAM135BQ49AJ0 1406 aa33.67■■■□□ 2.98
NDUFS3-206ENST00000528192 TRPM2O94759 1503 aa33.65■■■□□ 2.98
NDUFS3-206ENST00000528192 TRIM52Q96A61 297 aa33.65■■■□□ 2.98
NDUFS3-206ENST00000528192 PIK3R4Q99570 1358 aa33.64■■■□□ 2.98
NDUFS3-206ENST00000528192 ZNF326Q5BKZ1 582 aaKnown RBP33.64■■■□□ 2.98
NDUFS3-206ENST00000528192 CLTCL1P53675 1640 aa33.64■■■□□ 2.98
NDUFS3-206ENST00000528192 SOCS7O14512 581 aa33.63■■■□□ 2.97
NDUFS3-206ENST00000528192 ROBO1Q9Y6N7 1651 aa33.6■■■□□ 2.97
NDUFS3-206ENST00000528192 KIF1BO60333 1816 aa33.58■■■□□ 2.97
NDUFS3-206ENST00000528192 NCOA3Q9Y6Q9 1424 aa33.58■■■□□ 2.97
NDUFS3-206ENST00000528192 SETBP1Q9Y6X0 1596 aa33.56■■■□□ 2.96
NDUFS3-206ENST00000528192 C14orf37Q86TY3 774 aa33.55■■■□□ 2.96
NDUFS3-206ENST00000528192 NRXN3Q9Y4C0 1643 aa33.54■■■□□ 2.96
NDUFS3-206ENST00000528192 SLC4A1APQ9BWU0 796 aaKnown RBP33.54■■■□□ 2.96
NDUFS3-206ENST00000528192 PHF23Q9BUL5 403 aaPredicted RBP33.53■■■□□ 2.96
NDUFS3-206ENST00000528192 SLAIN2Q9P270 581 aa33.53■■■□□ 2.96
NDUFS3-206ENST00000528192 AMOTL2Q9Y2J4 779 aa33.52■■■□□ 2.96
NDUFS3-206ENST00000528192 NEXMIFQ5QGS0 1516 aa33.52■■■□□ 2.96
NDUFS3-206ENST00000528192 PTPRUQ92729 1446 aa33.49■■■□□ 2.95
NDUFS3-206ENST00000528192 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.46■■■□□ 2.95
NDUFS3-206ENST00000528192 C19orf44Q9H6X5 657 aa33.46■■■□□ 2.95
NDUFS3-206ENST00000528192 XRN1Q8IZH2 1706 aaKnown RBP33.45■■■□□ 2.95
NDUFS3-206ENST00000528192 CADPS2Q86UW7 1296 aa33.44■■■□□ 2.94
NDUFS3-206ENST00000528192 ATF3P18847 181 aa33.43■■■□□ 2.94
NDUFS3-206ENST00000528192 PHLPP1O60346 1717 aa33.42■■■□□ 2.94
NDUFS3-206ENST00000528192 METP08581 1390 aa33.41■■■□□ 2.94
NDUFS3-206ENST00000528192 VGFO15240 615 aaPredicted RBP33.38■■■□□ 2.93
NDUFS3-206ENST00000528192 RPGRIP1LQ68CZ1 1315 aa33.36■■■□□ 2.93
NDUFS3-206ENST00000528192 FOXD1Q16676 465 aa33.34■■■□□ 2.93
NDUFS3-206ENST00000528192 DCCP43146 1447 aa33.34■■■□□ 2.93
NDUFS3-206ENST00000528192 PPLO60437 1756 aa33.32■■■□□ 2.92
NDUFS3-206ENST00000528192 MPHOSPH9Q99550 1183 aa33.3■■■□□ 2.92
NDUFS3-206ENST00000528192 COL16A1Q07092 1604 aaPredicted RBP33.29■■■□□ 2.92
NDUFS3-206ENST00000528192 CCDC144AA2RUR9 1427 aa33.28■■■□□ 2.92
NDUFS3-206ENST00000528192 JCADQ9P266 1359 aa33.28■■■□□ 2.92
NDUFS3-206ENST00000528192 SETD1AO15047 1707 aaKnown RBP33.28■■■□□ 2.92
NDUFS3-206ENST00000528192 ACIN1Q9UKV3 1341 aaKnown RBP33.28■■■□□ 2.92
NDUFS3-206ENST00000528192 AHDC1Q5TGY3 1603 aaPredicted RBP33.26■■■□□ 2.91
NDUFS3-206ENST00000528192 ADGRL3Q9HAR2 1447 aa33.24■■■□□ 2.91
NDUFS3-206ENST00000528192 SETD5Q9C0A6 1442 aa33.23■■■□□ 2.91
NDUFS3-206ENST00000528192 BRINP3Q76B58 766 aa33.22■■■□□ 2.91
NDUFS3-206ENST00000528192 RGS17Q9UGC6 210 aaPredicted RBP33.22■■■□□ 2.91
NDUFS3-206ENST00000528192 NALCNQ8IZF0 1738 aa33.21■■■□□ 2.91
NDUFS3-206ENST00000528192 PTCH1Q13635 1447 aa33.2■■■□□ 2.91
NDUFS3-206ENST00000528192 MST1RQ04912 1400 aa33.19■■■□□ 2.9
NDUFS3-206ENST00000528192 RGL3Q3MIN7 710 aa33.17■■■□□ 2.9
NDUFS3-206ENST00000528192 SPATA31E1Q6ZUB1 1445 aa33.17■■■□□ 2.9
NDUFS3-206ENST00000528192 ASXL1Q8IXJ9 1541 aa33.17■■■□□ 2.9
NDUFS3-206ENST00000528192 PRAG1Q86YV5 1406 aa33.14■■■□□ 2.9
NDUFS3-206ENST00000528192 ROBO2Q9HCK4 1378 aa33.14■■■□□ 2.9
NDUFS3-206ENST00000528192 IFT172Q9UG01 1749 aa33.14■■■□□ 2.89
NDUFS3-206ENST00000528192 SHPRHQ149N8 1683 aa33.13■■■□□ 2.89
NDUFS3-206ENST00000528192 ANKRD30BQ9BXX2 1392 aa33.13■■■□□ 2.89
NDUFS3-206ENST00000528192 SPATA31A6Q5VVP1 1343 aa33.13■■■□□ 2.89
NDUFS3-206ENST00000528192 ADGRF5Q8IZF2 1346 aa33.11■■■□□ 2.89
NDUFS3-206ENST00000528192 NHSL1Q5SYE7 1610 aa33.1■■■□□ 2.89
NDUFS3-206ENST00000528192 RAB3GAP2Q9H2M9 1393 aa33.09■■■□□ 2.89
NDUFS3-206ENST00000528192 POTEAQ6S8J7 498 aa33.06■■■□□ 2.88
NDUFS3-206ENST00000528192 LRP6O75581 1613 aa33.04■■■□□ 2.88
NDUFS3-206ENST00000528192 MEX3CQ5U5Q3 659 aaKnown RBP33.03■■■□□ 2.88
NDUFS3-206ENST00000528192 C1orf167Q5SNV9 1468 aa33.03■■■□□ 2.88
NDUFS3-206ENST00000528192 PIK3C2GO75747 1445 aa33■■■□□ 2.87
NDUFS3-206ENST00000528192 LRRC59Q96AG4 307 aaKnown RBP32.99■■■□□ 2.87
NDUFS3-206ENST00000528192 DDX17Q92841 729 aaKnown RBP32.97■■■□□ 2.87
NDUFS3-206ENST00000528192 STK26Q9P289 416 aa32.97■■■□□ 2.87
NDUFS3-206ENST00000528192 LRPPRCP42704 1394 aaKnown RBP32.96■■■□□ 2.87
NDUFS3-206ENST00000528192 TECPR2O15040 1411 aa32.95■■■□□ 2.87
NDUFS3-206ENST00000528192 KNDC1Q76NI1 1749 aa32.94■■■□□ 2.86
NDUFS3-206ENST00000528192 NUTM2BA6NNL0 878 aaPredicted RBP32.94■■■□□ 2.86
NDUFS3-206ENST00000528192 NUTM2EB1AL46 878 aaPredicted RBP32.94■■■□□ 2.86
NDUFS3-206ENST00000528192 NUTM2AQ8IVF1 878 aaPredicted RBP32.94■■■□□ 2.86
NDUFS3-206ENST00000528192 CDC42BPGQ6DT37 1551 aa32.94■■■□□ 2.86
NDUFS3-206ENST00000528192 LAMC1P11047 1609 aa32.94■■■□□ 2.86
NDUFS3-206ENST00000528192 TMEM132EQ6IEE7 984 aa32.93■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms