RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 MRC2Q9UBG0 1479 aa18.84■□□□□ 0.61
CAPN1-214ENST00000528165 WDR7Q9Y4E6 1490 aa18.84■□□□□ 0.61
CAPN1-214ENST00000528165 SEC24BO95487 1268 aa18.84■□□□□ 0.61
CAPN1-214ENST00000528165 AMER1Q5JTC6 1135 aaPredicted RBP18.84■□□□□ 0.61
CAPN1-214ENST00000528165 IFT140Q96RY7 1462 aa18.84■□□□□ 0.61
CAPN1-214ENST00000528165 CARMIL2Q6F5E8 1435 aa18.84■□□□□ 0.61
CAPN1-214ENST00000528165 CCDC141Q6ZP82 1450 aa18.84■□□□□ 0.61
CAPN1-214ENST00000528165 RRAGDQ9NQL2 400 aaPredicted RBP18.83■□□□□ 0.61
CAPN1-214ENST00000528165 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.83■□□□□ 0.65e-6■■□□□ 13.2
CAPN1-214ENST00000528165 SPINK5Q9NQ38 1064 aaPredicted RBP18.83■□□□□ 0.6
CAPN1-214ENST00000528165 E9PSI1 815 aa18.82■□□□□ 0.6
CAPN1-214ENST00000528165 PIK3C2GO75747 1445 aa18.82■□□□□ 0.6
CAPN1-214ENST00000528165 SYNJ2O15056 1496 aa18.82■□□□□ 0.6
CAPN1-214ENST00000528165 APAF1O14727 1248 aa18.82■□□□□ 0.6
CAPN1-214ENST00000528165 UPF2Q9HAU5 1272 aaKnown RBP18.81■□□□□ 0.6
CAPN1-214ENST00000528165 MYO5CQ9NQX4 1742 aa18.81■□□□□ 0.6
CAPN1-214ENST00000528165 PDE3AQ14432 1141 aa18.81■□□□□ 0.6
CAPN1-214ENST00000528165 CLUAP1Q96AJ1 413 aa18.81■□□□□ 0.6
CAPN1-214ENST00000528165 CANXP27824 592 aaKnown RBP18.8■□□□□ 0.6
CAPN1-214ENST00000528165 DNAJC5BQ9UF47 199 aa18.8■□□□□ 0.6
CAPN1-214ENST00000528165 CDCA8Q53HL2 280 aa18.79■□□□□ 0.6
CAPN1-214ENST00000528165 RSPH4AQ5TD94 716 aa18.79■□□□□ 0.6
CAPN1-214ENST00000528165 ANTXR1Q9H6X2 564 aa18.79■□□□□ 0.6
CAPN1-214ENST00000528165 ATP10BO94823 1461 aa18.78■□□□□ 0.6
CAPN1-214ENST00000528165 ASXL1Q8IXJ9 1541 aa18.78■□□□□ 0.6
CAPN1-214ENST00000528165 NINLQ9Y2I6 1382 aa18.78■□□□□ 0.6
CAPN1-214ENST00000528165 ABCC2Q92887 1545 aa18.77■□□□□ 0.6
CAPN1-214ENST00000528165 NLRP1Q9C000 1473 aa18.77■□□□□ 0.6
CAPN1-214ENST00000528165 ABCA8O94911 1581 aa18.77■□□□□ 0.6
CAPN1-214ENST00000528165 CHMP7Q8WUX9 453 aaPredicted RBP18.77■□□□□ 0.59
CAPN1-214ENST00000528165 COG6Q9Y2V7 657 aa18.77■□□□□ 0.59
CAPN1-214ENST00000528165 CENPJQ9HC77 1338 aaPredicted RBP18.76■□□□□ 0.59
CAPN1-214ENST00000528165 UNC13BO14795 1591 aa18.76■□□□□ 0.59
CAPN1-214ENST00000528165 ARXQ96QS3 562 aa18.76■□□□□ 0.59
CAPN1-214ENST00000528165 RNF17Q9BXT8 1623 aaKnown RBP18.75■□□□□ 0.59
CAPN1-214ENST00000528165 GOLGA6L3A6NEY3 463 aa18.75■□□□□ 0.59
CAPN1-214ENST00000528165 PANK1Q8TE04 598 aa18.75■□□□□ 0.59
CAPN1-214ENST00000528165 SYNMO15061 1565 aa18.75■□□□□ 0.59
CAPN1-214ENST00000528165 JPH4Q96JJ6 628 aa18.75■□□□□ 0.59
CAPN1-214ENST00000528165 NGEFQ8N5V2 710 aa18.74■□□□□ 0.59
CAPN1-214ENST00000528165 TBC1D32Q96NH3 1257 aa18.73■□□□□ 0.59
CAPN1-214ENST00000528165 SAMD9LQ8IVG5 1584 aa18.73■□□□□ 0.59
CAPN1-214ENST00000528165 TBC1D2Q9BYX2 928 aa18.73■□□□□ 0.59
CAPN1-214ENST00000528165 NPC1L1Q9UHC9 1359 aa18.73■□□□□ 0.59
CAPN1-214ENST00000528165 XRCC6P12956 609 aaKnown RBP eCLIP18.73■□□□□ 0.59
CAPN1-214ENST00000528165 PMFBP1Q8TBY8 1022 aa18.72■□□□□ 0.59
CAPN1-214ENST00000528165 DMRT2Q9Y5R5 561 aa18.72■□□□□ 0.59
CAPN1-214ENST00000528165 GLIPR1L2Q4G1C9 344 aa18.71■□□□□ 0.59
CAPN1-214ENST00000528165 FBLN2P98095 1184 aa18.71■□□□□ 0.59
CAPN1-214ENST00000528165 PNNQ9H307 717 aaKnown RBP18.71■□□□□ 0.59
CAPN1-214ENST00000528165 IQGAP3Q86VI3 1631 aa18.7■□□□□ 0.58
CAPN1-214ENST00000528165 ATP10AO60312 1499 aa18.7■□□□□ 0.58
CAPN1-214ENST00000528165 NAP1L5Q96NT1 182 aaPredicted RBP18.7■□□□□ 0.58
CAPN1-214ENST00000528165 FSD2A1L4K1 749 aa18.69■□□□□ 0.58
CAPN1-214ENST00000528165 ZMYM3Q14202 1370 aa18.69■□□□□ 0.58
CAPN1-214ENST00000528165 AAMPQ13685 434 aa18.69■□□□□ 0.58
CAPN1-214ENST00000528165 MCM4P33991 863 aa18.69■□□□□ 0.58
CAPN1-214ENST00000528165 GZF1Q9H116 711 aaPredicted RBP18.68■□□□□ 0.58
CAPN1-214ENST00000528165 PLXNC1O60486 1568 aa18.68■□□□□ 0.58
CAPN1-214ENST00000528165 IQGAP1P46940 1657 aa18.68■□□□□ 0.58
CAPN1-214ENST00000528165 CLCN1P35523 988 aa18.67■□□□□ 0.58
CAPN1-214ENST00000528165 SPRYD3Q8NCJ5 442 aa18.67■□□□□ 0.58
CAPN1-214ENST00000528165 SCAF11Q99590 1463 aaKnown RBP18.66■□□□□ 0.58
CAPN1-214ENST00000528165 WWC1Q8IX03 1113 aa18.66■□□□□ 0.58
CAPN1-214ENST00000528165 PREX2Q70Z35 1606 aa18.66■□□□□ 0.58
CAPN1-214ENST00000528165 CDC42BPBQ9Y5S2 1711 aa18.66■□□□□ 0.58
CAPN1-214ENST00000528165 SYCP2Q9BX26 1530 aa18.66■□□□□ 0.58
CAPN1-214ENST00000528165 PDZRN3Q9UPQ7 1066 aa18.66■□□□□ 0.58
CAPN1-214ENST00000528165 PANK2Q9BZ23 570 aa18.65■□□□□ 0.58
CAPN1-214ENST00000528165 MAST1Q9Y2H9 1570 aa18.65■□□□□ 0.58
CAPN1-214ENST00000528165 PCDHB15Q9Y5E8 787 aa18.64■□□□□ 0.58
CAPN1-214ENST00000528165 MADDQ8WXG6 1647 aa18.64■□□□□ 0.57
CAPN1-214ENST00000528165 RWDD1Q9H446 243 aaPredicted RBP18.63■□□□□ 0.57
CAPN1-214ENST00000528165 CHMP5Q9NZZ3 219 aa18.63■□□□□ 0.57
CAPN1-214ENST00000528165 MYOM1P52179 1685 aa18.62■□□□□ 0.57
CAPN1-214ENST00000528165 TRAK2O60296 914 aa18.62■□□□□ 0.57
CAPN1-214ENST00000528165 RARSP54136 660 aaKnown RBP18.62■□□□□ 0.57
CAPN1-214ENST00000528165 MRE11P49959 708 aa18.62■□□□□ 0.57
CAPN1-214ENST00000528165 HSP90AA1P07900 732 aaKnown RBP18.61■□□□□ 0.57
CAPN1-214ENST00000528165 SCAPERQ9BY12 1400 aa18.6■□□□□ 0.57
CAPN1-214ENST00000528165 ARHGAP5Q13017 1502 aa18.6■□□□□ 0.57
CAPN1-214ENST00000528165 RLBP1P12271 317 aa18.59■□□□□ 0.57
CAPN1-214ENST00000528165 NEUROD2Q15784 382 aa18.59■□□□□ 0.57
CAPN1-214ENST00000528165 HSP90AA2PQ14568 343 aaPredicted RBP18.59■□□□□ 0.57
CAPN1-214ENST00000528165 C22orf23Q9BZE7 217 aa18.59■□□□□ 0.57
CAPN1-214ENST00000528165 DUOX2Q9NRD8 1548 aa18.58■□□□□ 0.57
CAPN1-214ENST00000528165 KDM5AP29375 1690 aaKnown RBP18.58■□□□□ 0.57
CAPN1-214ENST00000528165 STAC3Q96MF2 364 aa18.58■□□□□ 0.57
CAPN1-214ENST00000528165 PKNOX2Q96KN3 472 aa18.57■□□□□ 0.56
CAPN1-214ENST00000528165 RRP9O43818 475 aaKnown RBP18.57■□□□□ 0.56
CAPN1-214ENST00000528165 MYH16Q9H6N6 1097 aa18.57■□□□□ 0.56
CAPN1-214ENST00000528165 TNNQ9UQP3 1299 aa18.57■□□□□ 0.56
CAPN1-214ENST00000528165 POLR3AO14802 1390 aaPredicted RBP18.56■□□□□ 0.56
CAPN1-214ENST00000528165 DDX11L8A8MPP1 907 aa18.56■□□□□ 0.56
CAPN1-214ENST00000528165 BCL2L13Q9BXK5 485 aa18.56■□□□□ 0.56
CAPN1-214ENST00000528165 MFAP1P55081 439 aaKnown RBP18.56■□□□□ 0.56
CAPN1-214ENST00000528165 GRPEL1Q9HAV7 217 aa18.55■□□□□ 0.56
CAPN1-214ENST00000528165 RRP7AQ9Y3A4 280 aaKnown RBP18.55■□□□□ 0.56
CAPN1-214ENST00000528165 SLC24A1O60721 1099 aa18.55■□□□□ 0.56
CAPN1-214ENST00000528165 CARD14Q9BXL6 1004 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms