RNA–Protein interactions for RNA: ENST00000527949.1

NR1H3-230, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2 BASIC

Gene NR1H3, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-230ENST00000527949 IQGAP3Q86VI3 1631 aa16.98■□□□□ 0.31
NR1H3-230ENST00000527949 MSH6P52701 1360 aa16.98■□□□□ 0.31
NR1H3-230ENST00000527949 HDGFP51858 240 aaKnown RBP16.97■□□□□ 0.31
NR1H3-230ENST00000527949 IDI1Q13907 227 aa16.97■□□□□ 0.31
NR1H3-230ENST00000527949 ADGRB3O60242 1522 aa16.96■□□□□ 0.3
NR1H3-230ENST00000527949 POTEAQ6S8J7 498 aa16.95■□□□□ 0.3
NR1H3-230ENST00000527949 JCADQ9P266 1359 aa16.94■□□□□ 0.3
NR1H3-230ENST00000527949 SLC26A8Q96RN1 970 aa16.94■□□□□ 0.3
NR1H3-230ENST00000527949 XIRP1Q702N8 1843 aaKnown RBP16.93■□□□□ 0.3
NR1H3-230ENST00000527949 BCANQ96GW7 911 aa16.93■□□□□ 0.3
NR1H3-230ENST00000527949 SLAIN2Q9P270 581 aa16.93■□□□□ 0.3
NR1H3-230ENST00000527949 ROBO1Q9Y6N7 1651 aa16.92■□□□□ 0.3
NR1H3-230ENST00000527949 E9PCH4 1651 aa16.91■□□□□ 0.3
NR1H3-230ENST00000527949 NWD1Q149M9 1564 aa16.91■□□□□ 0.3
NR1H3-230ENST00000527949 NCOA3Q9Y6Q9 1424 aa16.91■□□□□ 0.3
NR1H3-230ENST00000527949 PPARGC1BQ86YN6 1023 aaKnown RBP16.91■□□□□ 0.3
NR1H3-230ENST00000527949 NUP155O75694 1391 aa16.9■□□□□ 0.3
NR1H3-230ENST00000527949 SPATA31A6Q5VVP1 1343 aa16.89■□□□□ 0.29
NR1H3-230ENST00000527949 TMEM131LA2VDJ0 1609 aa16.88■□□□□ 0.29
NR1H3-230ENST00000527949 PLEKHG1Q9ULL1 1385 aa16.88■□□□□ 0.29
NR1H3-230ENST00000527949 NAIPQ13075 1403 aa16.87■□□□□ 0.29
NR1H3-230ENST00000527949 PPP1R15AO75807 674 aaPredicted RBP16.87■□□□□ 0.29
NR1H3-230ENST00000527949 ITGAEP38570 1179 aa16.87■□□□□ 0.29
NR1H3-230ENST00000527949 ZNF772Q68DY9 489 aaPredicted RBP16.87■□□□□ 0.29
NR1H3-230ENST00000527949 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.87■□□□□ 0.29
NR1H3-230ENST00000527949 ZFYVE9O95405 1425 aa16.87■□□□□ 0.29
NR1H3-230ENST00000527949 TBX22Q9Y458 520 aa16.86■□□□□ 0.29
NR1H3-230ENST00000527949 HFM1A2PYH4 1435 aa16.86■□□□□ 0.29
NR1H3-230ENST00000527949 CADPS2Q86UW7 1296 aa16.85■□□□□ 0.29
NR1H3-230ENST00000527949 RBM33Q96EV2 1170 aaKnown RBP16.85■□□□□ 0.29
NR1H3-230ENST00000527949 MYO5BQ9ULV0 1848 aa16.83■□□□□ 0.28
NR1H3-230ENST00000527949 PIK3R4Q99570 1358 aa16.82■□□□□ 0.28
NR1H3-230ENST00000527949 MEX3CQ5U5Q3 659 aaKnown RBP16.82■□□□□ 0.28
NR1H3-230ENST00000527949 C14orf37Q86TY3 774 aa16.82■□□□□ 0.28
NR1H3-230ENST00000527949 PHLPP1O60346 1717 aa16.82■□□□□ 0.28
NR1H3-230ENST00000527949 RIMS2Q9UQ26 1411 aa16.81■□□□□ 0.28
NR1H3-230ENST00000527949 ATF3P18847 181 aa16.81■□□□□ 0.28
NR1H3-230ENST00000527949 C19orf44Q9H6X5 657 aa16.81■□□□□ 0.28
NR1H3-230ENST00000527949 SPHKAPQ2M3C7 1700 aa16.81■□□□□ 0.28
NR1H3-230ENST00000527949 COL16A1Q07092 1604 aaPredicted RBP16.78■□□□□ 0.28
NR1H3-230ENST00000527949 DIP2AQ14689 1571 aa16.77■□□□□ 0.28
NR1H3-230ENST00000527949 TRPM2O94759 1503 aa16.76■□□□□ 0.27
NR1H3-230ENST00000527949 ACIN1Q9UKV3 1341 aaKnown RBP16.76■□□□□ 0.27
NR1H3-230ENST00000527949 AHDC1Q5TGY3 1603 aaPredicted RBP16.75■□□□□ 0.27
NR1H3-230ENST00000527949 RXRBP28702 533 aa16.75■□□□□ 0.27
NR1H3-230ENST00000527949 UPF1Q92900 1129 aaKnown RBP eCLIP16.75■□□□□ 0.27
NR1H3-230ENST00000527949 CHD2O14647 1828 aaKnown RBP16.75■□□□□ 0.27
NR1H3-230ENST00000527949 CDK12Q9NYV4 1490 aaPredicted RBP16.73■□□□□ 0.27
NR1H3-230ENST00000527949 DCCP43146 1447 aa16.73■□□□□ 0.27
NR1H3-230ENST00000527949 LRP6O75581 1613 aa16.73■□□□□ 0.27
NR1H3-230ENST00000527949 ADAMTS13Q76LX8 1427 aa16.72■□□□□ 0.27
NR1H3-230ENST00000527949 CHGAP10645 457 aaKnown RBP16.72■□□□□ 0.27
NR1H3-230ENST00000527949 TRIM52Q96A61 297 aa16.72■□□□□ 0.27
NR1H3-230ENST00000527949 CLTCL1P53675 1640 aa16.7■□□□□ 0.26
NR1H3-230ENST00000527949 SHPRHQ149N8 1683 aa16.7■□□□□ 0.26
NR1H3-230ENST00000527949 SETD1AO15047 1707 aaKnown RBP16.7■□□□□ 0.26
NR1H3-230ENST00000527949 SETBP1Q9Y6X0 1596 aa16.69■□□□□ 0.26
NR1H3-230ENST00000527949 BRINP3Q76B58 766 aa16.69■□□□□ 0.26
NR1H3-230ENST00000527949 AMOTL2Q9Y2J4 779 aa16.69■□□□□ 0.26
NR1H3-230ENST00000527949 KIF1BO60333 1816 aa16.68■□□□□ 0.26
NR1H3-230ENST00000527949 LRRC59Q96AG4 307 aaKnown RBP16.68■□□□□ 0.26
NR1H3-230ENST00000527949 SETD5Q9C0A6 1442 aa16.67■□□□□ 0.26
NR1H3-230ENST00000527949 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.67■□□□□ 0.26
NR1H3-230ENST00000527949 SLC4A1APQ9BWU0 796 aaKnown RBP16.66■□□□□ 0.26
NR1H3-230ENST00000527949 NEXMIFQ5QGS0 1516 aa16.65■□□□□ 0.26
NR1H3-230ENST00000527949 NUTM2BA6NNL0 878 aaPredicted RBP16.65■□□□□ 0.26
NR1H3-230ENST00000527949 NUTM2EB1AL46 878 aaPredicted RBP16.65■□□□□ 0.26
NR1H3-230ENST00000527949 NUTM2AQ8IVF1 878 aaPredicted RBP16.65■□□□□ 0.26
NR1H3-230ENST00000527949 NRXN3Q9Y4C0 1643 aa16.65■□□□□ 0.26
NR1H3-230ENST00000527949 FOXD1Q16676 465 aa16.64■□□□□ 0.25
NR1H3-230ENST00000527949 AFF2P51816 1311 aa16.64■□□□□ 0.25
NR1H3-230ENST00000527949 RPGRIP1LQ68CZ1 1315 aa16.64■□□□□ 0.25
NR1H3-230ENST00000527949 NUTM2DQ5VT03 806 aaPredicted RBP16.63■□□□□ 0.25
NR1H3-230ENST00000527949 ASXL1Q8IXJ9 1541 aa16.62■□□□□ 0.25
NR1H3-230ENST00000527949 RBM6P78332 1123 aaKnown RBP16.62■□□□□ 0.25
NR1H3-230ENST00000527949 ZNF326Q5BKZ1 582 aaKnown RBP16.61■□□□□ 0.25
NR1H3-230ENST00000527949 NGLY1Q96IV0 654 aa16.61■□□□□ 0.25
NR1H3-230ENST00000527949 XRN1Q8IZH2 1706 aaKnown RBP16.61■□□□□ 0.25
NR1H3-230ENST00000527949 MST1RQ04912 1400 aa16.6■□□□□ 0.25
NR1H3-230ENST00000527949 PTPRUQ92729 1446 aa16.6■□□□□ 0.25
NR1H3-230ENST00000527949 VGFO15240 615 aaPredicted RBP16.59■□□□□ 0.25
NR1H3-230ENST00000527949 QTRT2Q9H974 415 aaKnown RBP16.59■□□□□ 0.25
NR1H3-230ENST00000527949 C8orf37Q96NL8 207 aa16.58■□□□□ 0.24
NR1H3-230ENST00000527949 MPHOSPH9Q99550 1183 aa16.58■□□□□ 0.24
NR1H3-230ENST00000527949 PRAG1Q86YV5 1406 aa16.58■□□□□ 0.24
NR1H3-230ENST00000527949 PPLO60437 1756 aa16.56■□□□□ 0.24
NR1H3-230ENST00000527949 CCDC144AA2RUR9 1427 aa16.56■□□□□ 0.24
NR1H3-230ENST00000527949 ADGRL3Q9HAR2 1447 aa16.56■□□□□ 0.24
NR1H3-230ENST00000527949 PNPLA6Q8IY17 1366 aa16.55■□□□□ 0.24
NR1H3-230ENST00000527949 HRCP23327 699 aa16.55■□□□□ 0.24
NR1H3-230ENST00000527949 NHSL1Q5SYE7 1610 aa16.55■□□□□ 0.24
NR1H3-230ENST00000527949 SPATA31E1Q6ZUB1 1445 aa16.54■□□□□ 0.24
NR1H3-230ENST00000527949 METP08581 1390 aa16.54■□□□□ 0.24
NR1H3-230ENST00000527949 ATAD2Q6PL18 1390 aa16.54■□□□□ 0.24
NR1H3-230ENST00000527949 RGS12O14924 1447 aa16.53■□□□□ 0.24
NR1H3-230ENST00000527949 ANKRD30BQ9BXX2 1392 aa16.52■□□□□ 0.24
NR1H3-230ENST00000527949 PTCH1Q13635 1447 aa16.52■□□□□ 0.23
NR1H3-230ENST00000527949 TRPC5Q9UL62 973 aaPredicted RBP16.51■□□□□ 0.23
NR1H3-230ENST00000527949 RAB3GAP2Q9H2M9 1393 aa16.51■□□□□ 0.23
NR1H3-230ENST00000527949 IFT172Q9UG01 1749 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms