RNA–Protein interactions for RNA: ENST00000527845.1

CKLF-CMTM1-202, Transcript of CKLF-CMTM1 readthrough, humanhuman

TSL 3

Gene CKLF-CMTM1, Length 504 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-CMTM1-202ENST00000527845 TMEM131LA2VDJ0 1609 aa26.87■■□□□ 1.89
CKLF-CMTM1-202ENST00000527845 ZFYVE9O95405 1425 aa26.87■■□□□ 1.89
CKLF-CMTM1-202ENST00000527845 TMEM94Q12767 1356 aa26.86■■□□□ 1.89
CKLF-CMTM1-202ENST00000527845 E9PCH4 1651 aa26.86■■□□□ 1.89
CKLF-CMTM1-202ENST00000527845 PLEKHG1Q9ULL1 1385 aa26.85■■□□□ 1.89
CKLF-CMTM1-202ENST00000527845 SLC26A8Q96RN1 970 aa26.84■■□□□ 1.89
CKLF-CMTM1-202ENST00000527845 FAM135BQ49AJ0 1406 aa26.83■■□□□ 1.89
CKLF-CMTM1-202ENST00000527845 RIMS2Q9UQ26 1411 aa26.83■■□□□ 1.89
CKLF-CMTM1-202ENST00000527845 PHF23Q9BUL5 403 aaPredicted RBP26.83■■□□□ 1.89
CKLF-CMTM1-202ENST00000527845 BCANQ96GW7 911 aa26.82■■□□□ 1.88
CKLF-CMTM1-202ENST00000527845 PPP1R15AO75807 674 aaPredicted RBP26.81■■□□□ 1.88
CKLF-CMTM1-202ENST00000527845 PROSER2Q86WR7 435 aaPredicted RBP26.81■■□□□ 1.88
CKLF-CMTM1-202ENST00000527845 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.8■■□□□ 1.88
CKLF-CMTM1-202ENST00000527845 CHD2O14647 1828 aaKnown RBP26.79■■□□□ 1.88
CKLF-CMTM1-202ENST00000527845 DIP2AQ14689 1571 aa26.78■■□□□ 1.88
CKLF-CMTM1-202ENST00000527845 MSH6P52701 1360 aa26.76■■□□□ 1.87
CKLF-CMTM1-202ENST00000527845 ROBO1Q9Y6N7 1651 aa26.76■■□□□ 1.87
CKLF-CMTM1-202ENST00000527845 NUP155O75694 1391 aa26.75■■□□□ 1.87
CKLF-CMTM1-202ENST00000527845 SENP3Q9H4L4 574 aaPredicted RBP26.75■■□□□ 1.87
CKLF-CMTM1-202ENST00000527845 CHGAP10645 457 aaKnown RBP26.72■■□□□ 1.87
CKLF-CMTM1-202ENST00000527845 TBX22Q9Y458 520 aa26.72■■□□□ 1.87
CKLF-CMTM1-202ENST00000527845 NCOA3Q9Y6Q9 1424 aa26.72■■□□□ 1.87
CKLF-CMTM1-202ENST00000527845 PIK3R4Q99570 1358 aa26.71■■□□□ 1.87
CKLF-CMTM1-202ENST00000527845 ITGAEP38570 1179 aa26.69■■□□□ 1.86
CKLF-CMTM1-202ENST00000527845 SPHKAPQ2M3C7 1700 aa26.69■■□□□ 1.86
CKLF-CMTM1-202ENST00000527845 ADAMTS13Q76LX8 1427 aa26.66■■□□□ 1.86
CKLF-CMTM1-202ENST00000527845 TRPM2O94759 1503 aa26.66■■□□□ 1.86
CKLF-CMTM1-202ENST00000527845 RBM33Q96EV2 1170 aaKnown RBP26.64■■□□□ 1.86
CKLF-CMTM1-202ENST00000527845 RRBP1Q9P2E9 1410 aaKnown RBP26.62■■□□□ 1.85
CKLF-CMTM1-202ENST00000527845 PHLPP1O60346 1717 aa26.62■■□□□ 1.85
CKLF-CMTM1-202ENST00000527845 SLAIN2Q9P270 581 aa26.61■■□□□ 1.85
CKLF-CMTM1-202ENST00000527845 SETBP1Q9Y6X0 1596 aa26.58■■□□□ 1.85
CKLF-CMTM1-202ENST00000527845 PPARGC1BQ86YN6 1023 aaKnown RBP26.57■■□□□ 1.84
CKLF-CMTM1-202ENST00000527845 NUTM2DQ5VT03 806 aaPredicted RBP26.56■■□□□ 1.84
CKLF-CMTM1-202ENST00000527845 C14orf37Q86TY3 774 aa26.56■■□□□ 1.84
CKLF-CMTM1-202ENST00000527845 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.56■■□□□ 1.84
CKLF-CMTM1-202ENST00000527845 CADPS2Q86UW7 1296 aa26.54■■□□□ 1.84
CKLF-CMTM1-202ENST00000527845 C19orf44Q9H6X5 657 aa26.53■■□□□ 1.84
CKLF-CMTM1-202ENST00000527845 JCADQ9P266 1359 aa26.53■■□□□ 1.84
CKLF-CMTM1-202ENST00000527845 NRXN3Q9Y4C0 1643 aa26.53■■□□□ 1.84
CKLF-CMTM1-202ENST00000527845 XRN1Q8IZH2 1706 aaKnown RBP26.52■■□□□ 1.84
CKLF-CMTM1-202ENST00000527845 COL16A1Q07092 1604 aaPredicted RBP26.51■■□□□ 1.83
CKLF-CMTM1-202ENST00000527845 DCCP43146 1447 aa26.51■■□□□ 1.83
CKLF-CMTM1-202ENST00000527845 NAIPQ13075 1403 aa26.51■■□□□ 1.83
CKLF-CMTM1-202ENST00000527845 ATF3P18847 181 aa26.51■■□□□ 1.83
CKLF-CMTM1-202ENST00000527845 KIF1BO60333 1816 aa26.51■■□□□ 1.83
CKLF-CMTM1-202ENST00000527845 CLTCL1P53675 1640 aa26.5■■□□□ 1.83
CKLF-CMTM1-202ENST00000527845 ZNF326Q5BKZ1 582 aaKnown RBP26.5■■□□□ 1.83
CKLF-CMTM1-202ENST00000527845 RGS17Q9UGC6 210 aaPredicted RBP26.5■■□□□ 1.83
CKLF-CMTM1-202ENST00000527845 AMOTL2Q9Y2J4 779 aa26.5■■□□□ 1.83
CKLF-CMTM1-202ENST00000527845 AHDC1Q5TGY3 1603 aaPredicted RBP26.5■■□□□ 1.83
CKLF-CMTM1-202ENST00000527845 PTPRUQ92729 1446 aa26.48■■□□□ 1.83
CKLF-CMTM1-202ENST00000527845 NEXMIFQ5QGS0 1516 aa26.46■■□□□ 1.83
CKLF-CMTM1-202ENST00000527845 HFM1A2PYH4 1435 aa26.44■■□□□ 1.82
CKLF-CMTM1-202ENST00000527845 SHPRHQ149N8 1683 aa26.42■■□□□ 1.82
CKLF-CMTM1-202ENST00000527845 SPATA31A6Q5VVP1 1343 aa26.41■■□□□ 1.82
CKLF-CMTM1-202ENST00000527845 METP08581 1390 aa26.37■■□□□ 1.81
CKLF-CMTM1-202ENST00000527845 POTEAQ6S8J7 498 aa26.36■■□□□ 1.81
CKLF-CMTM1-202ENST00000527845 ADGRL3Q9HAR2 1447 aa26.36■■□□□ 1.81
CKLF-CMTM1-202ENST00000527845 ASXL1Q8IXJ9 1541 aa26.35■■□□□ 1.81
CKLF-CMTM1-202ENST00000527845 TRIM52Q96A61 297 aa26.35■■□□□ 1.81
CKLF-CMTM1-202ENST00000527845 BRINP3Q76B58 766 aa26.34■■□□□ 1.81
CKLF-CMTM1-202ENST00000527845 MST1RQ04912 1400 aa26.33■■□□□ 1.81
CKLF-CMTM1-202ENST00000527845 NHSL1Q5SYE7 1610 aa26.33■■□□□ 1.81
CKLF-CMTM1-202ENST00000527845 VGFO15240 615 aaPredicted RBP26.33■■□□□ 1.81
CKLF-CMTM1-202ENST00000527845 NALCNQ8IZF0 1738 aa26.32■■□□□ 1.8
CKLF-CMTM1-202ENST00000527845 RPGRIP1LQ68CZ1 1315 aa26.32■■□□□ 1.8
CKLF-CMTM1-202ENST00000527845 SLC4A1APQ9BWU0 796 aaKnown RBP26.31■■□□□ 1.8
CKLF-CMTM1-202ENST00000527845 LRP6O75581 1613 aa26.31■■□□□ 1.8
CKLF-CMTM1-202ENST00000527845 SETD1AO15047 1707 aaKnown RBP26.31■■□□□ 1.8
CKLF-CMTM1-202ENST00000527845 PTCH1Q13635 1447 aa26.31■■□□□ 1.8
CKLF-CMTM1-202ENST00000527845 PPLO60437 1756 aa26.29■■□□□ 1.8
CKLF-CMTM1-202ENST00000527845 MEX3CQ5U5Q3 659 aaKnown RBP26.29■■□□□ 1.8
CKLF-CMTM1-202ENST00000527845 PRAG1Q86YV5 1406 aa26.28■■□□□ 1.8
CKLF-CMTM1-202ENST00000527845 SETD5Q9C0A6 1442 aa26.28■■□□□ 1.8
CKLF-CMTM1-202ENST00000527845 ZNF772Q68DY9 489 aaPredicted RBP26.26■■□□□ 1.79
CKLF-CMTM1-202ENST00000527845 LRRC59Q96AG4 307 aaKnown RBP26.21■■□□□ 1.79
CKLF-CMTM1-202ENST00000527845 LAMC1P11047 1609 aa26.2■■□□□ 1.78
CKLF-CMTM1-202ENST00000527845 CCDC144AA2RUR9 1427 aa26.19■■□□□ 1.78
CKLF-CMTM1-202ENST00000527845 ACIN1Q9UKV3 1341 aaKnown RBP26.18■■□□□ 1.78
CKLF-CMTM1-202ENST00000527845 C1orf167Q5SNV9 1468 aa26.17■■□□□ 1.78
CKLF-CMTM1-202ENST00000527845 ROBO2Q9HCK4 1378 aa26.17■■□□□ 1.78
CKLF-CMTM1-202ENST00000527845 IFT172Q9UG01 1749 aa26.14■■□□□ 1.77
CKLF-CMTM1-202ENST00000527845 NUTM2BA6NNL0 878 aaPredicted RBP26.13■■□□□ 1.77
CKLF-CMTM1-202ENST00000527845 NUTM2EB1AL46 878 aaPredicted RBP26.13■■□□□ 1.77
CKLF-CMTM1-202ENST00000527845 NUTM2AQ8IVF1 878 aaPredicted RBP26.13■■□□□ 1.77
CKLF-CMTM1-202ENST00000527845 PNPLA6Q8IY17 1366 aa26.12■■□□□ 1.77
CKLF-CMTM1-202ENST00000527845 ANKRD30BQ9BXX2 1392 aa26.12■■□□□ 1.77
CKLF-CMTM1-202ENST00000527845 CDC42BPGQ6DT37 1551 aa26.12■■□□□ 1.77
CKLF-CMTM1-202ENST00000527845 CDK12Q9NYV4 1490 aaPredicted RBP26.11■■□□□ 1.77
CKLF-CMTM1-202ENST00000527845 SPATA31E1Q6ZUB1 1445 aa26.09■■□□□ 1.77
CKLF-CMTM1-202ENST00000527845 AFF2P51816 1311 aa26.08■■□□□ 1.77
CKLF-CMTM1-202ENST00000527845 RXRBP28702 533 aa26.07■■□□□ 1.76
CKLF-CMTM1-202ENST00000527845 FOXD1Q16676 465 aa26.07■■□□□ 1.76
CKLF-CMTM1-202ENST00000527845 MPHOSPH9Q99550 1183 aa26.07■■□□□ 1.76
CKLF-CMTM1-202ENST00000527845 KNDC1Q76NI1 1749 aa26.07■■□□□ 1.76
CKLF-CMTM1-202ENST00000527845 TECPR2O15040 1411 aa26.06■■□□□ 1.76
CKLF-CMTM1-202ENST00000527845 SOS2Q07890 1332 aaPredicted RBP26.06■■□□□ 1.76
CKLF-CMTM1-202ENST00000527845 DDX17Q92841 729 aaKnown RBP26.05■■□□□ 1.76
CKLF-CMTM1-202ENST00000527845 ADGRF5Q8IZF2 1346 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms