RNA–Protein interactions for RNA: ENST00000527698.1

LRRK1-206, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 2

Gene LRRK1, Length 679 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-206ENST00000527698 KIF1BO60333 1816 aa34.15■■■■□ 3.06
LRRK1-206ENST00000527698 STRCP1A6NGW2 1772 aa34.15■■■■□ 3.06
LRRK1-206ENST00000527698 TMEM131LA2VDJ0 1609 aa34.15■■■■□ 3.06
LRRK1-206ENST00000527698 HSPA1LP34931 641 aa34.14■■■■□ 3.06
LRRK1-206ENST00000527698 SLIT1O75093 1534 aa34.14■■■■□ 3.06
LRRK1-206ENST00000527698 ALKQ9UM73 1620 aa34.12■■■■□ 3.05
LRRK1-206ENST00000527698 EID1Q9Y6B2 187 aa34.12■■■■□ 3.05
LRRK1-206ENST00000527698 FOXD1Q16676 465 aa34.11■■■■□ 3.05
LRRK1-206ENST00000527698 ARHGAP23Q9P227 1491 aa34.11■■■■□ 3.05
LRRK1-206ENST00000527698 TMEM2Q9UHN6 1383 aa34.11■■■■□ 3.05
LRRK1-206ENST00000527698 CLTCL1P53675 1640 aa34.1■■■■□ 3.05
LRRK1-206ENST00000527698 CCDC144AA2RUR9 1427 aa34.1■■■■□ 3.05
LRRK1-206ENST00000527698 CHGAP10645 457 aaKnown RBP34.09■■■■□ 3.05
LRRK1-206ENST00000527698 SCAF11Q99590 1463 aaKnown RBP34.08■■■■□ 3.05
LRRK1-206ENST00000527698 MYO5BQ9ULV0 1848 aa34.08■■■■□ 3.05
LRRK1-206ENST00000527698 LRRC7Q96NW7 1537 aa34.08■■■■□ 3.05
LRRK1-206ENST00000527698 MED1Q15648 1581 aaPredicted RBP34.07■■■■□ 3.05
LRRK1-206ENST00000527698 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.05■■■■□ 3.04
LRRK1-206ENST00000527698 TXNDC2Q86VQ3 553 aa34.03■■■■□ 3.04
LRRK1-206ENST00000527698 PCGF6Q9BYE7 350 aa34.03■■■■□ 3.04
LRRK1-206ENST00000527698 ANKRD30BQ9BXX2 1392 aa34.01■■■■□ 3.04
LRRK1-206ENST00000527698 LTKP29376 864 aa33.97■■■■□ 3.03
LRRK1-206ENST00000527698 ZNF326Q5BKZ1 582 aaKnown RBP33.97■■■■□ 3.03
LRRK1-206ENST00000527698 RPGRIP1LQ68CZ1 1315 aa33.97■■■■□ 3.03
LRRK1-206ENST00000527698 ZFYVE9O95405 1425 aa33.96■■■■□ 3.03
LRRK1-206ENST00000527698 RIMS2Q9UQ26 1411 aa33.96■■■■□ 3.03
LRRK1-206ENST00000527698 PPP1R15AO75807 674 aaPredicted RBP33.92■■■■□ 3.02
LRRK1-206ENST00000527698 XIRP1Q702N8 1843 aaKnown RBP33.9■■■■□ 3.02
LRRK1-206ENST00000527698 SPATA31E1Q6ZUB1 1445 aa33.87■■■■□ 3.01
LRRK1-206ENST00000527698 PLEKHG1Q9ULL1 1385 aa33.86■■■■□ 3.01
LRRK1-206ENST00000527698 VGFO15240 615 aaPredicted RBP33.86■■■■□ 3.01
LRRK1-206ENST00000527698 DHX57Q6P158 1386 aaKnown RBP33.85■■■■□ 3.01
LRRK1-206ENST00000527698 NEXMIFQ5QGS0 1516 aa33.83■■■■□ 3.01
LRRK1-206ENST00000527698 PPLO60437 1756 aa33.8■■■■□ 3
LRRK1-206ENST00000527698 STAC3Q96MF2 364 aa33.8■■■■□ 3
LRRK1-206ENST00000527698 RGL3Q3MIN7 710 aa33.79■■■■□ 3
LRRK1-206ENST00000527698 BCANQ96GW7 911 aa33.79■■■■□ 3
LRRK1-206ENST00000527698 PHF23Q9BUL5 403 aaPredicted RBP33.76■■■□□ 2.99
LRRK1-206ENST00000527698 IFT172Q9UG01 1749 aa33.73■■■□□ 2.99
LRRK1-206ENST00000527698 DIP2AQ14689 1571 aa33.73■■■□□ 2.99
LRRK1-206ENST00000527698 TBX22Q9Y458 520 aa33.73■■■□□ 2.99
LRRK1-206ENST00000527698 NUTM2DQ5VT03 806 aaPredicted RBP33.72■■■□□ 2.99
LRRK1-206ENST00000527698 SETBP1Q9Y6X0 1596 aa33.71■■■□□ 2.99
LRRK1-206ENST00000527698 KCNA6P17658 529 aa33.7■■■□□ 2.99
LRRK1-206ENST00000527698 FAM135BQ49AJ0 1406 aa33.7■■■□□ 2.98
LRRK1-206ENST00000527698 TMEM94Q12767 1356 aa33.68■■■□□ 2.98
LRRK1-206ENST00000527698 NWD1Q149M9 1564 aa33.68■■■□□ 2.98
LRRK1-206ENST00000527698 SENP3Q9H4L4 574 aaPredicted RBP33.67■■■□□ 2.98
LRRK1-206ENST00000527698 SLC26A8Q96RN1 970 aa33.66■■■□□ 2.98
LRRK1-206ENST00000527698 PIK3R4Q99570 1358 aa33.66■■■□□ 2.98
LRRK1-206ENST00000527698 NKTRP30414 1462 aaKnown RBP33.65■■■□□ 2.98
LRRK1-206ENST00000527698 CLSPNQ9HAW4 1339 aa33.65■■■□□ 2.98
LRRK1-206ENST00000527698 MYOM2P54296 1465 aa33.63■■■□□ 2.97
LRRK1-206ENST00000527698 ADAMTS13Q76LX8 1427 aa33.62■■■□□ 2.97
LRRK1-206ENST00000527698 NRXN3Q9Y4C0 1643 aa33.6■■■□□ 2.97
LRRK1-206ENST00000527698 DCAF11Q8TEB1 546 aa33.59■■■□□ 2.97
LRRK1-206ENST00000527698 ROBO1Q9Y6N7 1651 aa33.58■■■□□ 2.97
LRRK1-206ENST00000527698 PROSER2Q86WR7 435 aaPredicted RBP33.58■■■□□ 2.97
LRRK1-206ENST00000527698 CHD2O14647 1828 aaKnown RBP33.58■■■□□ 2.97
LRRK1-206ENST00000527698 ADGRF5Q8IZF2 1346 aa33.56■■■□□ 2.96
LRRK1-206ENST00000527698 SIN3AQ96ST3 1273 aa33.56■■■□□ 2.96
LRRK1-206ENST00000527698 NRXN1Q9ULB1 1477 aa33.56■■■□□ 2.96
LRRK1-206ENST00000527698 NEUROD1Q13562 356 aa33.55■■■□□ 2.96
LRRK1-206ENST00000527698 PIK3C2GO75747 1445 aa33.54■■■□□ 2.96
LRRK1-206ENST00000527698 LAMC1P11047 1609 aa33.51■■■□□ 2.96
LRRK1-206ENST00000527698 MSH6P52701 1360 aa33.49■■■□□ 2.95
LRRK1-206ENST00000527698 KDM2AQ9Y2K7 1162 aa33.49■■■□□ 2.95
LRRK1-206ENST00000527698 RGS17Q9UGC6 210 aaPredicted RBP33.48■■■□□ 2.95
LRRK1-206ENST00000527698 SETD1AO15047 1707 aaKnown RBP33.48■■■□□ 2.95
LRRK1-206ENST00000527698 C14orf93Q9H972 538 aaKnown RBP33.47■■■□□ 2.95
LRRK1-206ENST00000527698 RBM33Q96EV2 1170 aaKnown RBP33.46■■■□□ 2.95
LRRK1-206ENST00000527698 CCER1Q8TC90 406 aaPredicted RBP33.45■■■□□ 2.95
LRRK1-206ENST00000527698 L3MBTL2Q969R5 705 aa33.44■■■□□ 2.94
LRRK1-206ENST00000527698 METP08581 1390 aa33.44■■■□□ 2.94
LRRK1-206ENST00000527698 AMOTL2Q9Y2J4 779 aa33.43■■■□□ 2.94
LRRK1-206ENST00000527698 TONSLQ96HA7 1378 aa33.43■■■□□ 2.94
LRRK1-206ENST00000527698 NCOA3Q9Y6Q9 1424 aa33.42■■■□□ 2.94
LRRK1-206ENST00000527698 TIMELESSQ9UNS1 1208 aa33.41■■■□□ 2.94
LRRK1-206ENST00000527698 SLAIN2Q9P270 581 aa33.39■■■□□ 2.94
LRRK1-206ENST00000527698 PHLPP1O60346 1717 aa33.39■■■□□ 2.94
LRRK1-206ENST00000527698 XRN1Q8IZH2 1706 aaKnown RBP33.38■■■□□ 2.93
LRRK1-206ENST00000527698 KIAA1210Q9ULL0 1709 aa33.37■■■□□ 2.93
LRRK1-206ENST00000527698 PTPRUQ92729 1446 aa33.36■■■□□ 2.93
LRRK1-206ENST00000527698 PRAG1Q86YV5 1406 aa33.36■■■□□ 2.93
LRRK1-206ENST00000527698 CFAP70Q5T0N1 1121 aa33.35■■■□□ 2.93
LRRK1-206ENST00000527698 LRPPRCP42704 1394 aaKnown RBP33.31■■■□□ 2.92
LRRK1-206ENST00000527698 PTCH1Q13635 1447 aa33.3■■■□□ 2.92
LRRK1-206ENST00000527698 ABCC11Q96J66 1382 aa33.3■■■□□ 2.92
LRRK1-206ENST00000527698 JCADQ9P266 1359 aa33.29■■■□□ 2.92
LRRK1-206ENST00000527698 COL16A1Q07092 1604 aaPredicted RBP33.28■■■□□ 2.92
LRRK1-206ENST00000527698 SIRT1Q96EB6 747 aa33.28■■■□□ 2.92
LRRK1-206ENST00000527698 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.28■■■□□ 2.92
LRRK1-206ENST00000527698 YTHDC2Q9H6S0 1430 aaKnown RBP33.28■■■□□ 2.92
LRRK1-206ENST00000527698 TMEM132EQ6IEE7 984 aa33.27■■■□□ 2.92
LRRK1-206ENST00000527698 KNDC1Q76NI1 1749 aa33.27■■■□□ 2.92
LRRK1-206ENST00000527698 TECPR2O15040 1411 aa33.27■■■□□ 2.92
LRRK1-206ENST00000527698 POTEAQ6S8J7 498 aa33.26■■■□□ 2.91
LRRK1-206ENST00000527698 ASXL1Q8IXJ9 1541 aa33.23■■■□□ 2.91
LRRK1-206ENST00000527698 ADGRB1O14514 1584 aa33.23■■■□□ 2.91
LRRK1-206ENST00000527698 CADPS2Q86UW7 1296 aa33.22■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms