RNA–Protein interactions for RNA: ENST00000527622.5

CTTN-211, Transcript of cortactin, humanhuman

TSL 4

Gene CTTN, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-211ENST00000527622 SPHKAPQ2M3C7 1700 aa28.86■■■□□ 2.21
CTTN-211ENST00000527622 ILDR2Q71H61 639 aa28.85■■■□□ 2.21
CTTN-211ENST00000527622 SCAF1Q9H7N4 1312 aaKnown RBP28.85■■■□□ 2.21
CTTN-211ENST00000527622 RIMS2Q9UQ26 1411 aa28.85■■■□□ 2.21
CTTN-211ENST00000527622 CHD2O14647 1828 aaKnown RBP28.84■■■□□ 2.21
CTTN-211ENST00000527622 PLEKHG1Q9ULL1 1385 aa28.82■■■□□ 2.2
CTTN-211ENST00000527622 NKTRP30414 1462 aaKnown RBP28.81■■■□□ 2.2
CTTN-211ENST00000527622 SLC26A8Q96RN1 970 aa28.81■■■□□ 2.2
CTTN-211ENST00000527622 MED1Q15648 1581 aaPredicted RBP28.79■■■□□ 2.2
CTTN-211ENST00000527622 NAIPQ13075 1403 aa28.79■■■□□ 2.2
CTTN-211ENST00000527622 KCNA6P17658 529 aa28.78■■■□□ 2.2
CTTN-211ENST00000527622 TMEM94Q12767 1356 aa28.77■■■□□ 2.2
CTTN-211ENST00000527622 ADAMTS13Q76LX8 1427 aa28.74■■■□□ 2.19
CTTN-211ENST00000527622 DIP2AQ14689 1571 aa28.73■■■□□ 2.19
CTTN-211ENST00000527622 CLTCL1P53675 1640 aa28.71■■■□□ 2.19
CTTN-211ENST00000527622 NRXN3Q9Y4C0 1643 aa28.71■■■□□ 2.19
CTTN-211ENST00000527622 TRPM2O94759 1503 aa28.69■■■□□ 2.18
CTTN-211ENST00000527622 HFM1A2PYH4 1435 aa28.69■■■□□ 2.18
CTTN-211ENST00000527622 CHGAP10645 457 aaKnown RBP28.67■■■□□ 2.18
CTTN-211ENST00000527622 SENP3Q9H4L4 574 aaPredicted RBP28.67■■■□□ 2.18
CTTN-211ENST00000527622 PPP1R15AO75807 674 aaPredicted RBP28.66■■■□□ 2.18
CTTN-211ENST00000527622 ROBO1Q9Y6N7 1651 aa28.66■■■□□ 2.18
CTTN-211ENST00000527622 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.65■■■□□ 2.18
CTTN-211ENST00000527622 RBM33Q96EV2 1170 aaKnown RBP28.65■■■□□ 2.18
CTTN-211ENST00000527622 FAM135BQ49AJ0 1406 aa28.65■■■□□ 2.18
CTTN-211ENST00000527622 PROSER2Q86WR7 435 aaPredicted RBP28.64■■■□□ 2.18
CTTN-211ENST00000527622 TBX22Q9Y458 520 aa28.64■■■□□ 2.18
CTTN-211ENST00000527622 SETBP1Q9Y6X0 1596 aa28.63■■■□□ 2.17
CTTN-211ENST00000527622 HDGFP51858 240 aaKnown RBP28.63■■■□□ 2.17
CTTN-211ENST00000527622 NUTM2DQ5VT03 806 aaPredicted RBP28.63■■■□□ 2.17
CTTN-211ENST00000527622 KIF1BO60333 1816 aa28.62■■■□□ 2.17
CTTN-211ENST00000527622 BCANQ96GW7 911 aa28.61■■■□□ 2.17
CTTN-211ENST00000527622 NEXMIFQ5QGS0 1516 aa28.6■■■□□ 2.17
CTTN-211ENST00000527622 PIK3R4Q99570 1358 aa28.6■■■□□ 2.17
CTTN-211ENST00000527622 XRN1Q8IZH2 1706 aaKnown RBP28.6■■■□□ 2.17
CTTN-211ENST00000527622 PTPRUQ92729 1446 aa28.58■■■□□ 2.17
CTTN-211ENST00000527622 SOCS7O14512 581 aa28.57■■■□□ 2.16
CTTN-211ENST00000527622 MSH6P52701 1360 aa28.55■■■□□ 2.16
CTTN-211ENST00000527622 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.55■■■□□ 2.16
CTTN-211ENST00000527622 NCOA3Q9Y6Q9 1424 aa28.54■■■□□ 2.16
CTTN-211ENST00000527622 SETD1AO15047 1707 aaKnown RBP28.51■■■□□ 2.15
CTTN-211ENST00000527622 PHLPP1O60346 1717 aa28.47■■■□□ 2.15
CTTN-211ENST00000527622 PPLO60437 1756 aa28.45■■■□□ 2.15
CTTN-211ENST00000527622 COL16A1Q07092 1604 aaPredicted RBP28.44■■■□□ 2.14
CTTN-211ENST00000527622 METP08581 1390 aa28.44■■■□□ 2.14
CTTN-211ENST00000527622 SLAIN2Q9P270 581 aa28.43■■■□□ 2.14
CTTN-211ENST00000527622 ZNF326Q5BKZ1 582 aaKnown RBP28.42■■■□□ 2.14
CTTN-211ENST00000527622 AMOTL2Q9Y2J4 779 aa28.42■■■□□ 2.14
CTTN-211ENST00000527622 TRIM52Q96A61 297 aa28.41■■■□□ 2.14
CTTN-211ENST00000527622 SLC4A1APQ9BWU0 796 aaKnown RBP28.39■■■□□ 2.14
CTTN-211ENST00000527622 NALCNQ8IZF0 1738 aa28.38■■■□□ 2.13
CTTN-211ENST00000527622 AHDC1Q5TGY3 1603 aaPredicted RBP28.38■■■□□ 2.13
CTTN-211ENST00000527622 DCCP43146 1447 aa28.37■■■□□ 2.13
CTTN-211ENST00000527622 C19orf44Q9H6X5 657 aa28.36■■■□□ 2.13
CTTN-211ENST00000527622 IFT172Q9UG01 1749 aa28.35■■■□□ 2.13
CTTN-211ENST00000527622 RGS17Q9UGC6 210 aaPredicted RBP28.34■■■□□ 2.13
CTTN-211ENST00000527622 PHF23Q9BUL5 403 aaPredicted RBP28.33■■■□□ 2.13
CTTN-211ENST00000527622 CADPS2Q86UW7 1296 aa28.32■■■□□ 2.12
CTTN-211ENST00000527622 PRAG1Q86YV5 1406 aa28.32■■■□□ 2.12
CTTN-211ENST00000527622 FOXD1Q16676 465 aa28.31■■■□□ 2.12
CTTN-211ENST00000527622 C14orf37Q86TY3 774 aa28.31■■■□□ 2.12
CTTN-211ENST00000527622 ADGRL3Q9HAR2 1447 aa28.3■■■□□ 2.12
CTTN-211ENST00000527622 MST1RQ04912 1400 aa28.29■■■□□ 2.12
CTTN-211ENST00000527622 NHSL1Q5SYE7 1610 aa28.29■■■□□ 2.12
CTTN-211ENST00000527622 PTCH1Q13635 1447 aa28.28■■■□□ 2.12
CTTN-211ENST00000527622 SPATA31E1Q6ZUB1 1445 aa28.28■■■□□ 2.12
CTTN-211ENST00000527622 SHPRHQ149N8 1683 aa28.28■■■□□ 2.12
CTTN-211ENST00000527622 RPGRIP1LQ68CZ1 1315 aa28.27■■■□□ 2.12
CTTN-211ENST00000527622 ATF3P18847 181 aa28.27■■■□□ 2.12
CTTN-211ENST00000527622 ASXL1Q8IXJ9 1541 aa28.27■■■□□ 2.12
CTTN-211ENST00000527622 JCADQ9P266 1359 aa28.26■■■□□ 2.12
CTTN-211ENST00000527622 CCDC144AA2RUR9 1427 aa28.24■■■□□ 2.11
CTTN-211ENST00000527622 VGFO15240 615 aaPredicted RBP28.23■■■□□ 2.11
CTTN-211ENST00000527622 BRINP3Q76B58 766 aa28.23■■■□□ 2.11
CTTN-211ENST00000527622 MPHOSPH9Q99550 1183 aa28.23■■■□□ 2.11
CTTN-211ENST00000527622 LRP6O75581 1613 aa28.22■■■□□ 2.11
CTTN-211ENST00000527622 ROBO2Q9HCK4 1378 aa28.21■■■□□ 2.11
CTTN-211ENST00000527622 SETD5Q9C0A6 1442 aa28.19■■■□□ 2.1
CTTN-211ENST00000527622 LAMC1P11047 1609 aa28.18■■■□□ 2.1
CTTN-211ENST00000527622 ADGRF5Q8IZF2 1346 aa28.15■■■□□ 2.1
CTTN-211ENST00000527622 KNDC1Q76NI1 1749 aa28.14■■■□□ 2.1
CTTN-211ENST00000527622 POTEAQ6S8J7 498 aa28.13■■■□□ 2.09
CTTN-211ENST00000527622 PIK3C2GO75747 1445 aa28.12■■■□□ 2.09
CTTN-211ENST00000527622 C1orf167Q5SNV9 1468 aa28.12■■■□□ 2.09
CTTN-211ENST00000527622 RAB3GAP2Q9H2M9 1393 aa28.11■■■□□ 2.09
CTTN-211ENST00000527622 SPATA31A6Q5VVP1 1343 aa28.11■■■□□ 2.09
CTTN-211ENST00000527622 ANKRD30BQ9BXX2 1392 aa28.11■■■□□ 2.09
CTTN-211ENST00000527622 TECPR2O15040 1411 aa28.09■■■□□ 2.09
CTTN-211ENST00000527622 CDC42BPGQ6DT37 1551 aa28.09■■■□□ 2.09
CTTN-211ENST00000527622 RGL3Q3MIN7 710 aa28.07■■■□□ 2.08
CTTN-211ENST00000527622 NRXN1Q9ULB1 1477 aa28.07■■■□□ 2.08
CTTN-211ENST00000527622 ACIN1Q9UKV3 1341 aaKnown RBP28.06■■■□□ 2.08
CTTN-211ENST00000527622 MYOM2P54296 1465 aa28.03■■■□□ 2.08
CTTN-211ENST00000527622 DDX17Q92841 729 aaKnown RBP28.03■■■□□ 2.08
CTTN-211ENST00000527622 LRPPRCP42704 1394 aaKnown RBP28.02■■■□□ 2.08
CTTN-211ENST00000527622 PNPLA6Q8IY17 1366 aa27.99■■■□□ 2.07
CTTN-211ENST00000527622 ABCC11Q96J66 1382 aa27.99■■■□□ 2.07
CTTN-211ENST00000527622 FMN2Q9NZ56 1722 aa27.96■■■□□ 2.07
CTTN-211ENST00000527622 YTHDC2Q9H6S0 1430 aaKnown RBP27.96■■■□□ 2.07
CTTN-211ENST00000527622 PLEKHH1Q9ULM0 1364 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms