RNA–Protein interactions for RNA: ENST00000527612.1

PPFIA1-209, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-209ENST00000527612 XRN1Q8IZH2 1706 aaKnown RBP10.47□□□□□ -0.73
PPFIA1-209ENST00000527612 NEXMIFQ5QGS0 1516 aa10.46□□□□□ -0.74
PPFIA1-209ENST00000527612 SETBP1Q9Y6X0 1596 aa10.46□□□□□ -0.74
PPFIA1-209ENST00000527612 PPLO60437 1756 aa10.45□□□□□ -0.74
PPFIA1-209ENST00000527612 IFT172Q9UG01 1749 aa10.45□□□□□ -0.74
PPFIA1-209ENST00000527612 MED1Q15648 1581 aaPredicted RBP10.45□□□□□ -0.74
PPFIA1-209ENST00000527612 RIMS2Q9UQ26 1411 aa10.45□□□□□ -0.74
PPFIA1-209ENST00000527612 NUP155O75694 1391 aa10.45□□□□□ -0.74
PPFIA1-209ENST00000527612 ROBO1Q9Y6N7 1651 aa10.44□□□□□ -0.74
PPFIA1-209ENST00000527612 PLEKHG1Q9ULL1 1385 aa10.44□□□□□ -0.74
PPFIA1-209ENST00000527612 UBAP1LF5GYI3 381 aa10.44□□□□□ -0.74
PPFIA1-209ENST00000527612 ITGAEP38570 1179 aa10.44□□□□□ -0.74
PPFIA1-209ENST00000527612 SLC52A1Q9NWF4 448 aa10.44□□□□□ -0.74
PPFIA1-209ENST00000527612 ADAMTS13Q76LX8 1427 aa10.43□□□□□ -0.74
PPFIA1-209ENST00000527612 TXNDC2Q86VQ3 553 aa10.43□□□□□ -0.74
PPFIA1-209ENST00000527612 NALCNQ8IZF0 1738 aa10.41□□□□□ -0.74
PPFIA1-209ENST00000527612 EID1Q9Y6B2 187 aa10.41□□□□□ -0.74
PPFIA1-209ENST00000527612 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.41□□□□□ -0.74
PPFIA1-209ENST00000527612 STAG3Q9UJ98 1225 aa10.39□□□□□ -0.75
PPFIA1-209ENST00000527612 TMEM94Q12767 1356 aa10.39□□□□□ -0.75
PPFIA1-209ENST00000527612 SLC26A8Q96RN1 970 aa10.37□□□□□ -0.75
PPFIA1-209ENST00000527612 COL16A1Q07092 1604 aaPredicted RBP10.36□□□□□ -0.75
PPFIA1-209ENST00000527612 PHLPP1O60346 1717 aa10.36□□□□□ -0.75
PPFIA1-209ENST00000527612 PTPRUQ92729 1446 aa10.36□□□□□ -0.75
PPFIA1-209ENST00000527612 TOM1O60784 492 aa10.36□□□□□ -0.75
PPFIA1-209ENST00000527612 HSPA1LP34931 641 aa10.36□□□□□ -0.75
PPFIA1-209ENST00000527612 DISP3Q9P2K9 1392 aa10.36□□□□□ -0.75
PPFIA1-209ENST00000527612 PIP4K2BP78356 416 aa10.35□□□□□ -0.75
PPFIA1-209ENST00000527612 PIK3R4Q99570 1358 aa10.35□□□□□ -0.75
PPFIA1-209ENST00000527612 NHSL1Q5SYE7 1610 aa10.34□□□□□ -0.75
PPFIA1-209ENST00000527612 KNDC1Q76NI1 1749 aa10.34□□□□□ -0.75
PPFIA1-209ENST00000527612 KCNA6P17658 529 aa10.34□□□□□ -0.75
PPFIA1-209ENST00000527612 SCAF1Q9H7N4 1312 aaKnown RBP10.33□□□□□ -0.76
PPFIA1-209ENST00000527612 PRAG1Q86YV5 1406 aa10.33□□□□□ -0.76
PPFIA1-209ENST00000527612 AHDC1Q5TGY3 1603 aaPredicted RBP10.33□□□□□ -0.76
PPFIA1-209ENST00000527612 ASXL1Q8IXJ9 1541 aa10.33□□□□□ -0.76
PPFIA1-209ENST00000527612 FAM135BQ49AJ0 1406 aa10.33□□□□□ -0.76
PPFIA1-209ENST00000527612 SHPRHQ149N8 1683 aa10.32□□□□□ -0.76
PPFIA1-209ENST00000527612 PPP1R15AO75807 674 aaPredicted RBP10.32□□□□□ -0.76
PPFIA1-209ENST00000527612 SENP3Q9H4L4 574 aaPredicted RBP10.32□□□□□ -0.76
PPFIA1-209ENST00000527612 NCOA3Q9Y6Q9 1424 aa10.32□□□□□ -0.76
PPFIA1-209ENST00000527612 CHGAP10645 457 aaKnown RBP10.31□□□□□ -0.76
PPFIA1-209ENST00000527612 NUTM2DQ5VT03 806 aaPredicted RBP10.31□□□□□ -0.76
PPFIA1-209ENST00000527612 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.31□□□□□ -0.76
PPFIA1-209ENST00000527612 SPATA31E1Q6ZUB1 1445 aa10.31□□□□□ -0.76
PPFIA1-209ENST00000527612 LAMC1P11047 1609 aa10.3□□□□□ -0.76
PPFIA1-209ENST00000527612 MSH6P52701 1360 aa10.3□□□□□ -0.76
PPFIA1-209ENST00000527612 ILDR2Q71H61 639 aa10.3□□□□□ -0.76
PPFIA1-209ENST00000527612 RBM33Q96EV2 1170 aaKnown RBP10.3□□□□□ -0.76
PPFIA1-209ENST00000527612 TBX22Q9Y458 520 aa10.3□□□□□ -0.76
PPFIA1-209ENST00000527612 DCCP43146 1447 aa10.3□□□□□ -0.76
PPFIA1-209ENST00000527612 PTCH1Q13635 1447 aa10.3□□□□□ -0.76
PPFIA1-209ENST00000527612 METP08581 1390 aa10.29□□□□□ -0.76
PPFIA1-209ENST00000527612 ADGRL3Q9HAR2 1447 aa10.28□□□□□ -0.76
PPFIA1-209ENST00000527612 CDC42BPGQ6DT37 1551 aa10.27□□□□□ -0.76
PPFIA1-209ENST00000527612 CCDC144AA2RUR9 1427 aa10.27□□□□□ -0.77
PPFIA1-209ENST00000527612 PROSER2Q86WR7 435 aaPredicted RBP10.27□□□□□ -0.77
PPFIA1-209ENST00000527612 MST1RQ04912 1400 aa10.26□□□□□ -0.77
PPFIA1-209ENST00000527612 HDGFP51858 240 aaKnown RBP10.26□□□□□ -0.77
PPFIA1-209ENST00000527612 BCANQ96GW7 911 aa10.26□□□□□ -0.77
PPFIA1-209ENST00000527612 SLC4A1APQ9BWU0 796 aaKnown RBP10.26□□□□□ -0.77
PPFIA1-209ENST00000527612 PIK3C2GO75747 1445 aa10.25□□□□□ -0.77
PPFIA1-209ENST00000527612 SETD5Q9C0A6 1442 aa10.25□□□□□ -0.77
PPFIA1-209ENST00000527612 NRXN1Q9ULB1 1477 aa10.25□□□□□ -0.77
PPFIA1-209ENST00000527612 TRIM52Q96A61 297 aa10.25□□□□□ -0.77
PPFIA1-209ENST00000527612 RAB3GAP2Q9H2M9 1393 aa10.25□□□□□ -0.77
PPFIA1-209ENST00000527612 MYOM2P54296 1465 aa10.24□□□□□ -0.77
PPFIA1-209ENST00000527612 FOXD1Q16676 465 aa10.24□□□□□ -0.77
PPFIA1-209ENST00000527612 LRP6O75581 1613 aa10.24□□□□□ -0.77
PPFIA1-209ENST00000527612 FMN2Q9NZ56 1722 aa10.24□□□□□ -0.77
PPFIA1-209ENST00000527612 TECPR2O15040 1411 aa10.24□□□□□ -0.77
PPFIA1-209ENST00000527612 ZNF326Q5BKZ1 582 aaKnown RBP10.23□□□□□ -0.77
PPFIA1-209ENST00000527612 AMOTL2Q9Y2J4 779 aa10.23□□□□□ -0.77
PPFIA1-209ENST00000527612 ROBO2Q9HCK4 1378 aa10.23□□□□□ -0.77
PPFIA1-209ENST00000527612 MPHOSPH9Q99550 1183 aa10.21□□□□□ -0.77
PPFIA1-209ENST00000527612 RGPD8O14715 1765 aaPredicted RBP10.21□□□□□ -0.78
PPFIA1-209ENST00000527612 ADGRB1O14514 1584 aa10.2□□□□□ -0.78
PPFIA1-209ENST00000527612 RPGRIP1LQ68CZ1 1315 aa10.2□□□□□ -0.78
PPFIA1-209ENST00000527612 COL22A1Q8NFW1 1626 aaPredicted RBP10.2□□□□□ -0.78
PPFIA1-209ENST00000527612 SLAIN2Q9P270 581 aa10.2□□□□□ -0.78
PPFIA1-209ENST00000527612 ARHGEF28Q8N1W1 1705 aaKnown RBP10.19□□□□□ -0.78
PPFIA1-209ENST00000527612 MARF1Q9Y4F3 1742 aaKnown RBP10.19□□□□□ -0.78
PPFIA1-209ENST00000527612 ADGRB2O60241 1585 aa10.19□□□□□ -0.78
PPFIA1-209ENST00000527612 ANKRD30BQ9BXX2 1392 aa10.19□□□□□ -0.78
PPFIA1-209ENST00000527612 SOCS7O14512 581 aa10.19□□□□□ -0.78
PPFIA1-209ENST00000527612 CADPS2Q86UW7 1296 aa10.19□□□□□ -0.78
PPFIA1-209ENST00000527612 C19orf44Q9H6X5 657 aa10.19□□□□□ -0.78
PPFIA1-209ENST00000527612 KIF1AQ12756 1690 aa10.18□□□□□ -0.78
PPFIA1-209ENST00000527612 C1orf167Q5SNV9 1468 aa10.18□□□□□ -0.78
PPFIA1-209ENST00000527612 JCADQ9P266 1359 aa10.18□□□□□ -0.78
PPFIA1-209ENST00000527612 ADGRF5Q8IZF2 1346 aa10.18□□□□□ -0.78
PPFIA1-209ENST00000527612 ABCA3Q99758 1704 aa10.18□□□□□ -0.78
PPFIA1-209ENST00000527612 USP32Q8NFA0 1604 aa10.18□□□□□ -0.78
PPFIA1-209ENST00000527612 VGFO15240 615 aaPredicted RBP10.17□□□□□ -0.78
PPFIA1-209ENST00000527612 BRINP3Q76B58 766 aa10.17□□□□□ -0.78
PPFIA1-209ENST00000527612 C14orf37Q86TY3 774 aa10.17□□□□□ -0.78
PPFIA1-209ENST00000527612 RGS17Q9UGC6 210 aaPredicted RBP10.16□□□□□ -0.78
PPFIA1-209ENST00000527612 EP400Q96L91 3159 aa10.16□□□□□ -0.78
PPFIA1-209ENST00000527612 DLC1Q96QB1 1528 aa10.16□□□□□ -0.78
PPFIA1-209ENST00000527612 KIAA1210Q9ULL0 1709 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms