RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 FGD6Q6ZV73 1430 aa20.41■□□□□ 0.86
CLNS1A-207ENST00000527133 PHLPP1O60346 1717 aa20.4■□□□□ 0.86
CLNS1A-207ENST00000527133 SLC52A1Q9NWF4 448 aa20.39■□□□□ 0.85
CLNS1A-207ENST00000527133 SETD1AO15047 1707 aaKnown RBP20.39■□□□□ 0.85
CLNS1A-207ENST00000527133 JCADQ9P266 1359 aa20.38■□□□□ 0.85
CLNS1A-207ENST00000527133 APLP2Q06481 763 aa20.38■□□□□ 0.85
CLNS1A-207ENST00000527133 PPP1R15AO75807 674 aaPredicted RBP20.35■□□□□ 0.85
CLNS1A-207ENST00000527133 ZFYVE9O95405 1425 aa20.35■□□□□ 0.85
CLNS1A-207ENST00000527133 PLEKHG1Q9ULL1 1385 aa20.34■□□□□ 0.85
CLNS1A-207ENST00000527133 RIMS2Q9UQ26 1411 aa20.33■□□□□ 0.84
CLNS1A-207ENST00000527133 CHD2O14647 1828 aaKnown RBP20.32■□□□□ 0.84
CLNS1A-207ENST00000527133 RPRD2Q5VT52 1461 aaKnown RBP20.32■□□□□ 0.84
CLNS1A-207ENST00000527133 COL16A1Q07092 1604 aaPredicted RBP20.32■□□□□ 0.84
CLNS1A-207ENST00000527133 MYO5BQ9ULV0 1848 aa20.32■□□□□ 0.84
CLNS1A-207ENST00000527133 C14orf37Q86TY3 774 aa20.31■□□□□ 0.84
CLNS1A-207ENST00000527133 ADGRL2O95490 1459 aa20.3■□□□□ 0.84
CLNS1A-207ENST00000527133 GCC2Q8IWJ2 1684 aa20.3■□□□□ 0.84
CLNS1A-207ENST00000527133 LRP6O75581 1613 aa20.29■□□□□ 0.84
CLNS1A-207ENST00000527133 HDGFP51858 240 aaKnown RBP20.29■□□□□ 0.84
CLNS1A-207ENST00000527133 MEX3CQ5U5Q3 659 aaKnown RBP20.29■□□□□ 0.84
CLNS1A-207ENST00000527133 ANKRD50Q9ULJ7 1429 aa20.27■□□□□ 0.84
CLNS1A-207ENST00000527133 TMEM131LA2VDJ0 1609 aa20.27■□□□□ 0.84
CLNS1A-207ENST00000527133 CHGAP10645 457 aaKnown RBP20.27■□□□□ 0.84
CLNS1A-207ENST00000527133 TBX22Q9Y458 520 aa20.27■□□□□ 0.84
CLNS1A-207ENST00000527133 SPATA31A6Q5VVP1 1343 aa20.27■□□□□ 0.83
CLNS1A-207ENST00000527133 FAM50AQ14320 339 aaKnown RBP20.26■□□□□ 0.83
CLNS1A-207ENST00000527133 NCOA3Q9Y6Q9 1424 aa20.26■□□□□ 0.83
CLNS1A-207ENST00000527133 NUTM2DQ5VT03 806 aaPredicted RBP20.25■□□□□ 0.83
CLNS1A-207ENST00000527133 ZNF772Q68DY9 489 aaPredicted RBP20.24■□□□□ 0.83
CLNS1A-207ENST00000527133 CADPS2Q86UW7 1296 aa20.24■□□□□ 0.83
CLNS1A-207ENST00000527133 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.24■□□□□ 0.83
CLNS1A-207ENST00000527133 TRIM52Q96A61 297 aa20.24■□□□□ 0.83
CLNS1A-207ENST00000527133 ATF3P18847 181 aa20.23■□□□□ 0.83
CLNS1A-207ENST00000527133 ADAMTS13Q76LX8 1427 aa20.23■□□□□ 0.83
CLNS1A-207ENST00000527133 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.22■□□□□ 0.83
CLNS1A-207ENST00000527133 C19orf44Q9H6X5 657 aa20.22■□□□□ 0.83
CLNS1A-207ENST00000527133 AHDC1Q5TGY3 1603 aaPredicted RBP20.22■□□□□ 0.83
CLNS1A-207ENST00000527133 UPF1Q92900 1129 aaKnown RBP eCLIP20.21■□□□□ 0.83
CLNS1A-207ENST00000527133 SHPRHQ149N8 1683 aa20.2■□□□□ 0.82
CLNS1A-207ENST00000527133 DIP2AQ14689 1571 aa20.2■□□□□ 0.82
CLNS1A-207ENST00000527133 PIK3R4Q99570 1358 aa20.19■□□□□ 0.82
CLNS1A-207ENST00000527133 UNC13BO14795 1591 aa20.17■□□□□ 0.82
CLNS1A-207ENST00000527133 NUTM2BA6NNL0 878 aaPredicted RBP20.17■□□□□ 0.82
CLNS1A-207ENST00000527133 NUTM2EB1AL46 878 aaPredicted RBP20.17■□□□□ 0.82
CLNS1A-207ENST00000527133 NUTM2AQ8IVF1 878 aaPredicted RBP20.17■□□□□ 0.82
CLNS1A-207ENST00000527133 E9PCH4 1651 aa20.16■□□□□ 0.82
CLNS1A-207ENST00000527133 RXRBP28702 533 aa20.16■□□□□ 0.82
CLNS1A-207ENST00000527133 BRINP3Q76B58 766 aa20.16■□□□□ 0.82
CLNS1A-207ENST00000527133 AMOTL2Q9Y2J4 779 aa20.16■□□□□ 0.82
CLNS1A-207ENST00000527133 TRPM2O94759 1503 aa20.15■□□□□ 0.82
CLNS1A-207ENST00000527133 PTPRUQ92729 1446 aa20.14■□□□□ 0.81
CLNS1A-207ENST00000527133 SRCAPQ6ZRS2 3230 aa20.11■□□□□ 0.81
CLNS1A-207ENST00000527133 ASXL1Q8IXJ9 1541 aa20.11■□□□□ 0.81
CLNS1A-207ENST00000527133 AFF2P51816 1311 aa20.1■□□□□ 0.81
CLNS1A-207ENST00000527133 DCCP43146 1447 aa20.1■□□□□ 0.81
CLNS1A-207ENST00000527133 IQGAP3Q86VI3 1631 aa20.09■□□□□ 0.81
CLNS1A-207ENST00000527133 CDK12Q9NYV4 1490 aaPredicted RBP20.09■□□□□ 0.81
CLNS1A-207ENST00000527133 MST1RQ04912 1400 aa20.07■□□□□ 0.8
CLNS1A-207ENST00000527133 SETD5Q9C0A6 1442 aa20.07■□□□□ 0.8
CLNS1A-207ENST00000527133 NUP155O75694 1391 aa20.07■□□□□ 0.8
CLNS1A-207ENST00000527133 XRN1Q8IZH2 1706 aaKnown RBP20.06■□□□□ 0.8
CLNS1A-207ENST00000527133 ROCK1Q13464 1354 aa20.05■□□□□ 0.8
CLNS1A-207ENST00000527133 NHSL1Q5SYE7 1610 aa20.05■□□□□ 0.8
CLNS1A-207ENST00000527133 NRXN3Q9Y4C0 1643 aa20.05■□□□□ 0.8
CLNS1A-207ENST00000527133 C8orf37Q96NL8 207 aa20.04■□□□□ 0.8
CLNS1A-207ENST00000527133 SETBP1Q9Y6X0 1596 aa20.04■□□□□ 0.8
CLNS1A-207ENST00000527133 DDX17Q92841 729 aaKnown RBP20.03■□□□□ 0.8
CLNS1A-207ENST00000527133 LRRC59Q96AG4 307 aaKnown RBP20.03■□□□□ 0.8
CLNS1A-207ENST00000527133 ZNF326Q5BKZ1 582 aaKnown RBP20.02■□□□□ 0.8
CLNS1A-207ENST00000527133 METP08581 1390 aa20.02■□□□□ 0.8
CLNS1A-207ENST00000527133 RGS12O14924 1447 aa20.02■□□□□ 0.79
CLNS1A-207ENST00000527133 PNPLA6Q8IY17 1366 aa20■□□□□ 0.79
CLNS1A-207ENST00000527133 QTRT2Q9H974 415 aaKnown RBP20■□□□□ 0.79
CLNS1A-207ENST00000527133 RBM6P78332 1123 aaKnown RBP19.99■□□□□ 0.79
CLNS1A-207ENST00000527133 ADGRL3Q9HAR2 1447 aa19.99■□□□□ 0.79
CLNS1A-207ENST00000527133 ITGAEP38570 1179 aa19.98■□□□□ 0.79
CLNS1A-207ENST00000527133 SPHKAPQ2M3C7 1700 aa19.97■□□□□ 0.79
CLNS1A-207ENST00000527133 ADAMTS2O95450 1211 aa19.96■□□□□ 0.79
CLNS1A-207ENST00000527133 NALCNQ8IZF0 1738 aa19.96■□□□□ 0.79
CLNS1A-207ENST00000527133 NGLY1Q96IV0 654 aa19.95■□□□□ 0.78
CLNS1A-207ENST00000527133 C1orf167Q5SNV9 1468 aa19.92■□□□□ 0.78
CLNS1A-207ENST00000527133 NEXMIFQ5QGS0 1516 aa19.92■□□□□ 0.78
CLNS1A-207ENST00000527133 EP400Q96L91 3159 aa19.89■□□□□ 0.78
CLNS1A-207ENST00000527133 CLTCL1P53675 1640 aa19.89■□□□□ 0.77
CLNS1A-207ENST00000527133 ATAD2Q6PL18 1390 aa19.88■□□□□ 0.77
CLNS1A-207ENST00000527133 ORAI2Q96SN7 254 aa19.88■□□□□ 0.77
CLNS1A-207ENST00000527133 USP21Q9UK80 565 aa19.88■□□□□ 0.77
CLNS1A-207ENST00000527133 LAMC1P11047 1609 aa19.87■□□□□ 0.77
CLNS1A-207ENST00000527133 SOS2Q07890 1332 aaPredicted RBP19.86■□□□□ 0.77
CLNS1A-207ENST00000527133 PTCH1Q13635 1447 aa19.85■□□□□ 0.77
CLNS1A-207ENST00000527133 ROBO2Q9HCK4 1378 aa19.85■□□□□ 0.77
CLNS1A-207ENST00000527133 TRPC5Q9UL62 973 aaPredicted RBP19.85■□□□□ 0.77
CLNS1A-207ENST00000527133 KIF1BO60333 1816 aa19.82■□□□□ 0.76
CLNS1A-207ENST00000527133 FNBP4Q8N3X1 1017 aaPredicted RBP19.82■□□□□ 0.76
CLNS1A-207ENST00000527133 PPARGC1BQ86YN6 1023 aaKnown RBP19.81■□□□□ 0.76
CLNS1A-207ENST00000527133 ATRNO75882 1429 aa19.8■□□□□ 0.76
CLNS1A-207ENST00000527133 VGFO15240 615 aaPredicted RBP19.8■□□□□ 0.76
CLNS1A-207ENST00000527133 COL22A1Q8NFW1 1626 aaPredicted RBP19.78■□□□□ 0.76
CLNS1A-207ENST00000527133 ZRANB1Q9UGI0 708 aa19.78■□□□□ 0.76
CLNS1A-207ENST00000527133 HFM1A2PYH4 1435 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms