RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 ALKQ9UM73 1620 aa18.73■□□□□ 0.59
SSSCA1-203ENST00000526877 ACIN1Q9UKV3 1341 aaKnown RBP18.73■□□□□ 0.59
SSSCA1-203ENST00000526877 TOM1O60784 492 aa18.71■□□□□ 0.59
SSSCA1-203ENST00000526877 SLC26A8Q96RN1 970 aa18.71■□□□□ 0.59
SSSCA1-203ENST00000526877 RIMS2Q9UQ26 1411 aa18.69■□□□□ 0.58
SSSCA1-203ENST00000526877 XIRP1Q702N8 1843 aaKnown RBP18.69■□□□□ 0.58
SSSCA1-203ENST00000526877 KCNA6P17658 529 aa18.68■□□□□ 0.58
SSSCA1-203ENST00000526877 CCER1Q8TC90 406 aaPredicted RBP18.68■□□□□ 0.58
SSSCA1-203ENST00000526877 CHGAP10645 457 aaKnown RBP18.67■□□□□ 0.58
SSSCA1-203ENST00000526877 HDGFP51858 240 aaKnown RBP18.67■□□□□ 0.58
SSSCA1-203ENST00000526877 PLEKHG1Q9ULL1 1385 aa18.67■□□□□ 0.58
SSSCA1-203ENST00000526877 PIP4K2BP78356 416 aa18.66■□□□□ 0.58
SSSCA1-203ENST00000526877 SPHKAPQ2M3C7 1700 aa18.66■□□□□ 0.58
SSSCA1-203ENST00000526877 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.64■□□□□ 0.57
SSSCA1-203ENST00000526877 HSPA1LP34931 641 aa18.62■□□□□ 0.57
SSSCA1-203ENST00000526877 NUTM2DQ5VT03 806 aaPredicted RBP18.62■□□□□ 0.57
SSSCA1-203ENST00000526877 TRIM52Q96A61 297 aa18.62■□□□□ 0.57
SSSCA1-203ENST00000526877 BCANQ96GW7 911 aa18.62■□□□□ 0.57
SSSCA1-203ENST00000526877 SENP3Q9H4L4 574 aaPredicted RBP18.62■□□□□ 0.57
SSSCA1-203ENST00000526877 TBX22Q9Y458 520 aa18.62■□□□□ 0.57
SSSCA1-203ENST00000526877 SCAF1Q9H7N4 1312 aaKnown RBP18.62■□□□□ 0.57
SSSCA1-203ENST00000526877 CHD2O14647 1828 aaKnown RBP18.61■□□□□ 0.57
SSSCA1-203ENST00000526877 NWD1Q149M9 1564 aa18.61■□□□□ 0.57
SSSCA1-203ENST00000526877 PPP1R15AO75807 674 aaPredicted RBP18.61■□□□□ 0.57
SSSCA1-203ENST00000526877 ADAMTS13Q76LX8 1427 aa18.6■□□□□ 0.57
SSSCA1-203ENST00000526877 TMEM94Q12767 1356 aa18.6■□□□□ 0.57
SSSCA1-203ENST00000526877 DHX57Q6P158 1386 aaKnown RBP18.59■□□□□ 0.57
SSSCA1-203ENST00000526877 PROSER2Q86WR7 435 aaPredicted RBP18.59■□□□□ 0.57
SSSCA1-203ENST00000526877 CLTCL1P53675 1640 aa18.58■□□□□ 0.56
SSSCA1-203ENST00000526877 TRPM2O94759 1503 aa18.58■□□□□ 0.56
SSSCA1-203ENST00000526877 RBM33Q96EV2 1170 aaKnown RBP18.57■□□□□ 0.56
SSSCA1-203ENST00000526877 NKTRP30414 1462 aaKnown RBP18.57■□□□□ 0.56
SSSCA1-203ENST00000526877 DISP3Q9P2K9 1392 aa18.55■□□□□ 0.56
SSSCA1-203ENST00000526877 SLC4A1APQ9BWU0 796 aaKnown RBP18.55■□□□□ 0.56
SSSCA1-203ENST00000526877 CLSPNQ9HAW4 1339 aa18.54■□□□□ 0.56
SSSCA1-203ENST00000526877 DIP2AQ14689 1571 aa18.53■□□□□ 0.56
SSSCA1-203ENST00000526877 PIK3R4Q99570 1358 aa18.53■□□□□ 0.56
SSSCA1-203ENST00000526877 KIF1BO60333 1816 aa18.52■□□□□ 0.56
SSSCA1-203ENST00000526877 ZNF326Q5BKZ1 582 aaKnown RBP18.52■□□□□ 0.56
SSSCA1-203ENST00000526877 NRXN3Q9Y4C0 1643 aa18.52■□□□□ 0.55
SSSCA1-203ENST00000526877 ZEB1P37275 1124 aaPredicted RBP18.51■□□□□ 0.55
SSSCA1-203ENST00000526877 FAM135BQ49AJ0 1406 aa18.5■□□□□ 0.55
SSSCA1-203ENST00000526877 PTPRUQ92729 1446 aa18.5■□□□□ 0.55
SSSCA1-203ENST00000526877 NEXMIFQ5QGS0 1516 aa18.5■□□□□ 0.55
SSSCA1-203ENST00000526877 MPHOSPH9Q99550 1183 aa18.5■□□□□ 0.55
SSSCA1-203ENST00000526877 SETBP1Q9Y6X0 1596 aa18.5■□□□□ 0.55
SSSCA1-203ENST00000526877 ILDR2Q71H61 639 aa18.49■□□□□ 0.55
SSSCA1-203ENST00000526877 FOXD1Q16676 465 aa18.48■□□□□ 0.55
SSSCA1-203ENST00000526877 AMOTL2Q9Y2J4 779 aa18.48■□□□□ 0.55
SSSCA1-203ENST00000526877 NCOA3Q9Y6Q9 1424 aa18.48■□□□□ 0.55
SSSCA1-203ENST00000526877 MSH6P52701 1360 aa18.46■□□□□ 0.55
SSSCA1-203ENST00000526877 METP08581 1390 aa18.45■□□□□ 0.54
SSSCA1-203ENST00000526877 SLAIN2Q9P270 581 aa18.44■□□□□ 0.54
SSSCA1-203ENST00000526877 RPGRIP1LQ68CZ1 1315 aa18.44■□□□□ 0.54
SSSCA1-203ENST00000526877 ROBO1Q9Y6N7 1651 aa18.43■□□□□ 0.54
SSSCA1-203ENST00000526877 XRN1Q8IZH2 1706 aaKnown RBP18.43■□□□□ 0.54
SSSCA1-203ENST00000526877 VGFO15240 615 aaPredicted RBP18.42■□□□□ 0.54
SSSCA1-203ENST00000526877 MED1Q15648 1581 aaPredicted RBP18.42■□□□□ 0.54
SSSCA1-203ENST00000526877 C19orf44Q9H6X5 657 aa18.41■□□□□ 0.54
SSSCA1-203ENST00000526877 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.4■□□□□ 0.54
SSSCA1-203ENST00000526877 PPLO60437 1756 aa18.4■□□□□ 0.54
SSSCA1-203ENST00000526877 SETD1AO15047 1707 aaKnown RBP18.38■□□□□ 0.53
SSSCA1-203ENST00000526877 CCDC144AA2RUR9 1427 aa18.38■□□□□ 0.53
SSSCA1-203ENST00000526877 SPATA31E1Q6ZUB1 1445 aa18.38■□□□□ 0.53
SSSCA1-203ENST00000526877 C14orf37Q86TY3 774 aa18.37■□□□□ 0.53
SSSCA1-203ENST00000526877 CADPS2Q86UW7 1296 aa18.36■□□□□ 0.53
SSSCA1-203ENST00000526877 ATF3P18847 181 aa18.34■□□□□ 0.53
SSSCA1-203ENST00000526877 RGL3Q3MIN7 710 aa18.34■□□□□ 0.53
SSSCA1-203ENST00000526877 ANKRD30BQ9BXX2 1392 aa18.33■□□□□ 0.53
SSSCA1-203ENST00000526877 ADGRF5Q8IZF2 1346 aa18.33■□□□□ 0.53
SSSCA1-203ENST00000526877 DCCP43146 1447 aa18.32■□□□□ 0.52
SSSCA1-203ENST00000526877 NEUROD1Q13562 356 aa18.32■□□□□ 0.52
SSSCA1-203ENST00000526877 SIN3AQ96ST3 1273 aa18.32■□□□□ 0.52
SSSCA1-203ENST00000526877 IFT172Q9UG01 1749 aa18.32■□□□□ 0.52
SSSCA1-203ENST00000526877 PHLPP1O60346 1717 aa18.31■□□□□ 0.52
SSSCA1-203ENST00000526877 SOCS7O14512 581 aa18.3■□□□□ 0.52
SSSCA1-203ENST00000526877 PRAG1Q86YV5 1406 aa18.3■□□□□ 0.52
SSSCA1-203ENST00000526877 ROBO2Q9HCK4 1378 aa18.3■□□□□ 0.52
SSSCA1-203ENST00000526877 ADGRL3Q9HAR2 1447 aa18.29■□□□□ 0.52
SSSCA1-203ENST00000526877 BRINP3Q76B58 766 aa18.28■□□□□ 0.52
SSSCA1-203ENST00000526877 TIMELESSQ9UNS1 1208 aa18.28■□□□□ 0.52
SSSCA1-203ENST00000526877 MST1RQ04912 1400 aa18.28■□□□□ 0.52
SSSCA1-203ENST00000526877 PTCH1Q13635 1447 aa18.28■□□□□ 0.52
SSSCA1-203ENST00000526877 COL16A1Q07092 1604 aaPredicted RBP18.27■□□□□ 0.52
SSSCA1-203ENST00000526877 NALCNQ8IZF0 1738 aa18.27■□□□□ 0.52
SSSCA1-203ENST00000526877 AHDC1Q5TGY3 1603 aaPredicted RBP18.27■□□□□ 0.51
SSSCA1-203ENST00000526877 RGS17Q9UGC6 210 aaPredicted RBP18.26■□□□□ 0.51
SSSCA1-203ENST00000526877 PHF23Q9BUL5 403 aaPredicted RBP18.25■□□□□ 0.51
SSSCA1-203ENST00000526877 JCADQ9P266 1359 aa18.24■□□□□ 0.51
SSSCA1-203ENST00000526877 PIK3C2GO75747 1445 aa18.23■□□□□ 0.51
SSSCA1-203ENST00000526877 TONSLQ96HA7 1378 aa18.23■□□□□ 0.51
SSSCA1-203ENST00000526877 ASXL1Q8IXJ9 1541 aa18.22■□□□□ 0.51
SSSCA1-203ENST00000526877 NRXN1Q9ULB1 1477 aa18.21■□□□□ 0.51
SSSCA1-203ENST00000526877 TMEM132EQ6IEE7 984 aa18.21■□□□□ 0.51
SSSCA1-203ENST00000526877 C14orf93Q9H972 538 aaKnown RBP18.2■□□□□ 0.5
SSSCA1-203ENST00000526877 TECPR2O15040 1411 aa18.2■□□□□ 0.5
SSSCA1-203ENST00000526877 LRPPRCP42704 1394 aaKnown RBP18.19■□□□□ 0.5
SSSCA1-203ENST00000526877 ABCC11Q96J66 1382 aa18.19■□□□□ 0.5
SSSCA1-203ENST00000526877 NHSL1Q5SYE7 1610 aa18.19■□□□□ 0.5
SSSCA1-203ENST00000526877 C1orf167Q5SNV9 1468 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms