RNA–Protein interactions for RNA: ENST00000526874.5

CTR9-203, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene CTR9, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-203ENST00000526874 KCTD12Q96CX2 325 aaKnown RBP9□□□□□ -0.97
CTR9-203ENST00000526874 BCAMP50895 628 aa8.99□□□□□ -0.97
CTR9-203ENST00000526874 NEUROD2Q15784 382 aa8.99□□□□□ -0.97
CTR9-203ENST00000526874 AMHR2Q16671 573 aa8.99□□□□□ -0.97
CTR9-203ENST00000526874 LAPTM4BQ86VI4 370 aa8.99□□□□□ -0.97
CTR9-203ENST00000526874 SPNS2Q8IVW8 549 aa8.99□□□□□ -0.97
CTR9-203ENST00000526874 WNT2BQ93097 391 aa8.99□□□□□ -0.97
CTR9-203ENST00000526874 TMEM134Q9H6X4 195 aa8.99□□□□□ -0.97
CTR9-203ENST00000526874 PCDH10Q9P2E7 1040 aa8.98□□□□□ -0.97
CTR9-203ENST00000526874 BRPF1P55201 1214 aaPredicted RBP8.97□□□□□ -0.97
CTR9-203ENST00000526874 MYT1LQ9UL68 1186 aa8.97□□□□□ -0.97
CTR9-203ENST00000526874 DDX11L8A8MPP1 907 aa8.96□□□□□ -0.98
CTR9-203ENST00000526874 TMEM132AQ24JP5 1023 aa8.96□□□□□ -0.98
CTR9-203ENST00000526874 GIGYF2Q6Y7W6 1299 aaKnown RBP8.96□□□□□ -0.98
CTR9-203ENST00000526874 ANKK1Q8NFD2 765 aa8.96□□□□□ -0.98
CTR9-203ENST00000526874 GPCPD1Q9NPB8 672 aa8.96□□□□□ -0.98
CTR9-203ENST00000526874 CLCN1P35523 988 aa8.95□□□□□ -0.98
CTR9-203ENST00000526874 ERICH6Q7L0X2 663 aa8.95□□□□□ -0.98
CTR9-203ENST00000526874 LRCH3Q96II8 777 aa8.95□□□□□ -0.98
CTR9-203ENST00000526874 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.95□□□□□ -0.98
CTR9-203ENST00000526874 TMUB1Q9BVT8 246 aa8.94□□□□□ -0.98
CTR9-203ENST00000526874 MS4A1P11836 297 aa8.93□□□□□ -0.98
CTR9-203ENST00000526874 HDGFP51858 240 aaKnown RBP8.93□□□□□ -0.98
CTR9-203ENST00000526874 RDH13Q8NBN7 331 aa8.93□□□□□ -0.98
CTR9-203ENST00000526874 KDM4CQ9H3R0 1056 aa8.93□□□□□ -0.98
CTR9-203ENST00000526874 HPS5Q9UPZ3 1129 aa8.93□□□□□ -0.98
CTR9-203ENST00000526874 SOWAHBA6NEL2 793 aa8.92□□□□□ -0.98
CTR9-203ENST00000526874 SLC10A3P09131 477 aa8.92□□□□□ -0.98
CTR9-203ENST00000526874 SSTR3P32745 418 aaPredicted RBP8.92□□□□□ -0.98
CTR9-203ENST00000526874 PTPN5P54829 565 aa8.92□□□□□ -0.98
CTR9-203ENST00000526874 THSD4Q6ZMP0 1018 aa8.92□□□□□ -0.98
CTR9-203ENST00000526874 FAM217BQ9NTX9 383 aaPredicted RBP8.92□□□□□ -0.98
CTR9-203ENST00000526874 RNF166Q96A37 237 aaPredicted RBP8.91□□□□□ -0.98
CTR9-203ENST00000526874 MMRN1Q13201 1228 aa8.89□□□□□ -0.99
CTR9-203ENST00000526874 SLF2Q8IX21 1173 aa8.89□□□□□ -0.99
CTR9-203ENST00000526874 WBP1LQ9NX94 342 aa8.89□□□□□ -0.99
CTR9-203ENST00000526874 CD46P15529 392 aa8.88□□□□□ -0.99
CTR9-203ENST00000526874 FAM117AQ9C073 453 aa8.88□□□□□ -0.99
CTR9-203ENST00000526874 CFHP08603 1231 aa8.87□□□□□ -0.99
CTR9-203ENST00000526874 PPP4CP60510 307 aa8.87□□□□□ -0.99
CTR9-203ENST00000526874 C14orf37Q86TY3 774 aa8.87□□□□□ -0.99
CTR9-203ENST00000526874 BEGAINQ9BUH8 593 aa8.87□□□□□ -0.99
CTR9-203ENST00000526874 SLC4A3P48751 1232 aa8.86□□□□□ -0.99
CTR9-203ENST00000526874 SULF1Q8IWU6 871 aa8.86□□□□□ -0.99
CTR9-203ENST00000526874 TSR3Q9UJK0 312 aaKnown RBP8.86□□□□□ -0.99
CTR9-203ENST00000526874 APLP1P51693 650 aa8.85□□□□□ -0.99
CTR9-203ENST00000526874 IL27Q8NEV9 243 aa8.85□□□□□ -0.99
CTR9-203ENST00000526874 HLA-CQ95604 372 aa8.82□□□□□ -1
CTR9-203ENST00000526874 PLEKHG3A1L390 1219 aa8.81□□□□□ -1
CTR9-203ENST00000526874 GCGRP47871 477 aa8.81□□□□□ -1
CTR9-203ENST00000526874 PUS10Q3MIT2 529 aaKnown RBP8.81□□□□□ -1
CTR9-203ENST00000526874 RSPH4AQ5TD94 716 aa8.81□□□□□ -1
CTR9-203ENST00000526874 PODXL2Q9NZ53 605 aa8.81□□□□□ -1
CTR9-203ENST00000526874 GUCA2AQ02747 115 aa8.8□□□□□ -1
CTR9-203ENST00000526874 FUT2Q10981 343 aa8.8□□□□□ -1
CTR9-203ENST00000526874 KMT5BQ4FZB7 885 aa8.8□□□□□ -1
CTR9-203ENST00000526874 PLSCR2Q9NRY7 297 aa8.8□□□□□ -1
CTR9-203ENST00000526874 RANGAP1P46060 587 aaPredicted RBP8.79□□□□□ -1
CTR9-203ENST00000526874 NUTM1Q86Y26 1132 aa8.79□□□□□ -1
CTR9-203ENST00000526874 SPIRE2Q8WWL2 714 aa8.79□□□□□ -1
CTR9-203ENST00000526874 KDM4AO75164 1064 aa8.78□□□□□ -1
CTR9-203ENST00000526874 COPS2P61201 443 aa8.78□□□□□ -1
CTR9-203ENST00000526874 TBC1D2Q9BYX2 928 aa8.78□□□□□ -1
CTR9-203ENST00000526874 NDUFV2P19404 249 aa8.77□□□□□ -1.01
CTR9-203ENST00000526874 DDRGK1Q96HY6 314 aa8.77□□□□□ -1.01
CTR9-203ENST00000526874 MOXD2PA6NHM9 499 aa8.76□□□□□ -1.01
CTR9-203ENST00000526874 ACTN4O43707 911 aaKnown RBP8.76□□□□□ -1.01
CTR9-203ENST00000526874 BLOC1S3Q6QNY0 202 aa8.76□□□□□ -1.01
CTR9-203ENST00000526874 NECTIN2Q92692 538 aa8.76□□□□□ -1.01
CTR9-203ENST00000526874 HCSTQ9UBK5 93 aa8.76□□□□□ -1.01
CTR9-203ENST00000526874 PCDHB3Q9Y5E6 796 aa8.76□□□□□ -1.01
CTR9-203ENST00000526874 HOXA2O43364 376 aa8.75□□□□□ -1.01
CTR9-203ENST00000526874 MYSM1Q5VVJ2 828 aa8.75□□□□□ -1.01
CTR9-203ENST00000526874 POLR3EQ9NVU0 708 aa8.75□□□□□ -1.01
CTR9-203ENST00000526874 CSPP1Q1MSJ5 1256 aa8.74□□□□□ -1.01
CTR9-203ENST00000526874 MTRQ99707 1265 aa8.73□□□□□ -1.01
CTR9-203ENST00000526874 PRR14Q9BWN1 585 aa8.73□□□□□ -1.01
CTR9-203ENST00000526874 LIMD1Q9UGP4 676 aa8.73□□□□□ -1.01
CTR9-203ENST00000526874 ATP1B4Q9UN42 357 aaPredicted RBP8.73□□□□□ -1.01
CTR9-203ENST00000526874 ATP6V1AP38606 617 aa8.72□□□□□ -1.01
CTR9-203ENST00000526874 TLL1O43897 1013 aa8.71□□□□□ -1.02
CTR9-203ENST00000526874 MORN1Q5T089 497 aa8.71□□□□□ -1.02
CTR9-203ENST00000526874 ZNF516Q92618 1163 aa8.71□□□□□ -1.02
CTR9-203ENST00000526874 SLC27A5Q9Y2P5 690 aa8.71□□□□□ -1.02
CTR9-203ENST00000526874 SUPT5HO00267 1087 aaKnown RBP8.7□□□□□ -1.02
CTR9-203ENST00000526874 FDX1P10109 184 aa8.7□□□□□ -1.02
CTR9-203ENST00000526874 USP46P62068 366 aa8.7□□□□□ -1.02
CTR9-203ENST00000526874 RSBN1LQ6PCB5 846 aaPredicted RBP8.7□□□□□ -1.02
CTR9-203ENST00000526874 NYAP1Q6ZVC0 841 aa8.7□□□□□ -1.02
CTR9-203ENST00000526874 RIC3Q7Z5B4 369 aa8.7□□□□□ -1.02
CTR9-203ENST00000526874 PROCA1Q8NCQ7 364 aaPredicted RBP8.7□□□□□ -1.02
CTR9-203ENST00000526874 SYMPKQ92797 1274 aaKnown RBP8.7□□□□□ -1.02
CTR9-203ENST00000526874 PCDHGC3Q9UN70 934 aa8.7□□□□□ -1.02
CTR9-203ENST00000526874 PCDHB15Q9Y5E8 787 aa8.7□□□□□ -1.02
CTR9-203ENST00000526874 CLK2P49760 499 aaKnown RBP8.69□□□□□ -1.02
CTR9-203ENST00000526874 SH3D19Q5HYK7 790 aa8.69□□□□□ -1.02
CTR9-203ENST00000526874 RNF19BQ6ZMZ0 732 aa8.69□□□□□ -1.02
CTR9-203ENST00000526874 TJAP1Q5JTD0 557 aa8.68□□□□□ -1.02
CTR9-203ENST00000526874 SCUBE3Q8IX30 993 aa8.68□□□□□ -1.02
CTR9-203ENST00000526874 CABLES1Q8TDN4 633 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms