RNA–Protein interactions for RNA: ENST00000526825.5

LTBP3-206, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 5

Gene LTBP3, Length 1,002 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-206ENST00000526825 HDGFP51858 240 aaKnown RBP23.13■■□□□ 1.29
LTBP3-206ENST00000526825 BCANQ96GW7 911 aa23.13■■□□□ 1.29
LTBP3-206ENST00000526825 ZFYVE9O95405 1425 aa23.13■■□□□ 1.29
LTBP3-206ENST00000526825 PHF23Q9BUL5 403 aaPredicted RBP23.12■■□□□ 1.29
LTBP3-206ENST00000526825 PLEKHG1Q9ULL1 1385 aa23.1■■□□□ 1.29
LTBP3-206ENST00000526825 RIMS2Q9UQ26 1411 aa23.09■■□□□ 1.29
LTBP3-206ENST00000526825 TBX22Q9Y458 520 aa23.09■■□□□ 1.29
LTBP3-206ENST00000526825 UNC13BO14795 1591 aa23.07■■□□□ 1.28
LTBP3-206ENST00000526825 PPP1R15AO75807 674 aaPredicted RBP23.06■■□□□ 1.28
LTBP3-206ENST00000526825 CHGAP10645 457 aaKnown RBP23.06■■□□□ 1.28
LTBP3-206ENST00000526825 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.06■■□□□ 1.28
LTBP3-206ENST00000526825 RGS17Q9UGC6 210 aaPredicted RBP23.06■■□□□ 1.28
LTBP3-206ENST00000526825 TMEM131LA2VDJ0 1609 aa23.06■■□□□ 1.28
LTBP3-206ENST00000526825 NKTRP30414 1462 aaKnown RBP23.05■■□□□ 1.28
LTBP3-206ENST00000526825 GCC2Q8IWJ2 1684 aa23.05■■□□□ 1.28
LTBP3-206ENST00000526825 MYO5BQ9ULV0 1848 aa23.05■■□□□ 1.28
LTBP3-206ENST00000526825 NWD1Q149M9 1564 aa23.05■■□□□ 1.28
LTBP3-206ENST00000526825 NUP155O75694 1391 aa23.04■■□□□ 1.28
LTBP3-206ENST00000526825 ITGAEP38570 1179 aa23.04■■□□□ 1.28
LTBP3-206ENST00000526825 SLAIN2Q9P270 581 aa23.03■■□□□ 1.28
LTBP3-206ENST00000526825 NUTM2DQ5VT03 806 aaPredicted RBP23.02■■□□□ 1.28
LTBP3-206ENST00000526825 E9PCH4 1651 aa23.02■■□□□ 1.28
LTBP3-206ENST00000526825 CHD2O14647 1828 aaKnown RBP23.01■■□□□ 1.27
LTBP3-206ENST00000526825 MSH6P52701 1360 aa23.01■■□□□ 1.27
LTBP3-206ENST00000526825 ADAMTS13Q76LX8 1427 aa22.99■■□□□ 1.27
LTBP3-206ENST00000526825 IQGAP3Q86VI3 1631 aa22.99■■□□□ 1.27
LTBP3-206ENST00000526825 NCOA3Q9Y6Q9 1424 aa22.97■■□□□ 1.27
LTBP3-206ENST00000526825 ROBO1Q9Y6N7 1651 aa22.97■■□□□ 1.27
LTBP3-206ENST00000526825 PIK3R4Q99570 1358 aa22.94■■□□□ 1.26
LTBP3-206ENST00000526825 C19orf44Q9H6X5 657 aa22.92■■□□□ 1.26
LTBP3-206ENST00000526825 AMOTL2Q9Y2J4 779 aa22.91■■□□□ 1.26
LTBP3-206ENST00000526825 POTEAQ6S8J7 498 aa22.9■■□□□ 1.26
LTBP3-206ENST00000526825 C14orf37Q86TY3 774 aa22.88■■□□□ 1.25
LTBP3-206ENST00000526825 CADPS2Q86UW7 1296 aa22.88■■□□□ 1.25
LTBP3-206ENST00000526825 PTPRUQ92729 1446 aa22.88■■□□□ 1.25
LTBP3-206ENST00000526825 DIP2AQ14689 1571 aa22.87■■□□□ 1.25
LTBP3-206ENST00000526825 JCADQ9P266 1359 aa22.86■■□□□ 1.25
LTBP3-206ENST00000526825 ATF3P18847 181 aa22.84■■□□□ 1.25
LTBP3-206ENST00000526825 RRBP1Q9P2E9 1410 aaKnown RBP22.83■■□□□ 1.25
LTBP3-206ENST00000526825 ZNF326Q5BKZ1 582 aaKnown RBP22.83■■□□□ 1.25
LTBP3-206ENST00000526825 PHLPP1O60346 1717 aa22.82■■□□□ 1.24
LTBP3-206ENST00000526825 TRPM2O94759 1503 aa22.82■■□□□ 1.24
LTBP3-206ENST00000526825 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.81■■□□□ 1.24
LTBP3-206ENST00000526825 NAIPQ13075 1403 aa22.8■■□□□ 1.24
LTBP3-206ENST00000526825 SPHKAPQ2M3C7 1700 aa22.79■■□□□ 1.24
LTBP3-206ENST00000526825 NRXN3Q9Y4C0 1643 aa22.79■■□□□ 1.24
LTBP3-206ENST00000526825 METP08581 1390 aa22.78■■□□□ 1.24
LTBP3-206ENST00000526825 COL16A1Q07092 1604 aaPredicted RBP22.78■■□□□ 1.24
LTBP3-206ENST00000526825 SETBP1Q9Y6X0 1596 aa22.77■■□□□ 1.24
LTBP3-206ENST00000526825 BRINP3Q76B58 766 aa22.77■■□□□ 1.24
LTBP3-206ENST00000526825 SPATA31A6Q5VVP1 1343 aa22.76■■□□□ 1.23
LTBP3-206ENST00000526825 AHDC1Q5TGY3 1603 aaPredicted RBP22.73■■□□□ 1.23
LTBP3-206ENST00000526825 DCCP43146 1447 aa22.73■■□□□ 1.23
LTBP3-206ENST00000526825 XRN1Q8IZH2 1706 aaKnown RBP22.72■■□□□ 1.23
LTBP3-206ENST00000526825 CLTCL1P53675 1640 aa22.71■■□□□ 1.23
LTBP3-206ENST00000526825 TRIM52Q96A61 297 aa22.71■■□□□ 1.23
LTBP3-206ENST00000526825 NEXMIFQ5QGS0 1516 aa22.71■■□□□ 1.23
LTBP3-206ENST00000526825 LRP6O75581 1613 aa22.7■■□□□ 1.22
LTBP3-206ENST00000526825 MST1RQ04912 1400 aa22.68■■□□□ 1.22
LTBP3-206ENST00000526825 VGFO15240 615 aaPredicted RBP22.68■■□□□ 1.22
LTBP3-206ENST00000526825 HFM1A2PYH4 1435 aa22.67■■□□□ 1.22
LTBP3-206ENST00000526825 SLC4A1APQ9BWU0 796 aaKnown RBP22.66■■□□□ 1.22
LTBP3-206ENST00000526825 RPGRIP1LQ68CZ1 1315 aa22.65■■□□□ 1.22
LTBP3-206ENST00000526825 MEX3CQ5U5Q3 659 aaKnown RBP22.65■■□□□ 1.22
LTBP3-206ENST00000526825 ZNF772Q68DY9 489 aaPredicted RBP22.65■■□□□ 1.22
LTBP3-206ENST00000526825 KIF1BO60333 1816 aa22.64■■□□□ 1.22
LTBP3-206ENST00000526825 SETD5Q9C0A6 1442 aa22.64■■□□□ 1.21
LTBP3-206ENST00000526825 ADGRL3Q9HAR2 1447 aa22.64■■□□□ 1.21
LTBP3-206ENST00000526825 SHPRHQ149N8 1683 aa22.63■■□□□ 1.21
LTBP3-206ENST00000526825 LRRC59Q96AG4 307 aaKnown RBP22.63■■□□□ 1.21
LTBP3-206ENST00000526825 ASXL1Q8IXJ9 1541 aa22.62■■□□□ 1.21
LTBP3-206ENST00000526825 NUTM2BA6NNL0 878 aaPredicted RBP22.61■■□□□ 1.21
LTBP3-206ENST00000526825 NUTM2EB1AL46 878 aaPredicted RBP22.61■■□□□ 1.21
LTBP3-206ENST00000526825 NUTM2AQ8IVF1 878 aaPredicted RBP22.61■■□□□ 1.21
LTBP3-206ENST00000526825 DDX17Q92841 729 aaKnown RBP22.61■■□□□ 1.21
LTBP3-206ENST00000526825 ROBO2Q9HCK4 1378 aa22.59■■□□□ 1.21
LTBP3-206ENST00000526825 FOXD1Q16676 465 aa22.58■■□□□ 1.21
LTBP3-206ENST00000526825 C1orf167Q5SNV9 1468 aa22.56■■□□□ 1.2
LTBP3-206ENST00000526825 NHSL1Q5SYE7 1610 aa22.56■■□□□ 1.2
LTBP3-206ENST00000526825 PTCH1Q13635 1447 aa22.56■■□□□ 1.2
LTBP3-206ENST00000526825 SETD1AO15047 1707 aaKnown RBP22.54■■□□□ 1.2
LTBP3-206ENST00000526825 NALCNQ8IZF0 1738 aa22.54■■□□□ 1.2
LTBP3-206ENST00000526825 RXRBP28702 533 aa22.54■■□□□ 1.2
LTBP3-206ENST00000526825 ORAI2Q96SN7 254 aa22.54■■□□□ 1.2
LTBP3-206ENST00000526825 PRAG1Q86YV5 1406 aa22.54■■□□□ 1.2
LTBP3-206ENST00000526825 PNPLA6Q8IY17 1366 aa22.52■■□□□ 1.2
LTBP3-206ENST00000526825 AFF2P51816 1311 aa22.52■■□□□ 1.2
LTBP3-206ENST00000526825 MPHOSPH9Q99550 1183 aa22.51■■□□□ 1.19
LTBP3-206ENST00000526825 SOS2Q07890 1332 aaPredicted RBP22.51■■□□□ 1.19
LTBP3-206ENST00000526825 ADGRF5Q8IZF2 1346 aa22.51■■□□□ 1.19
LTBP3-206ENST00000526825 UPF1Q92900 1129 aaKnown RBP eCLIP22.5■■□□□ 1.19
LTBP3-206ENST00000526825 PPLO60437 1756 aa22.49■■□□□ 1.19
LTBP3-206ENST00000526825 RGL3Q3MIN7 710 aa22.48■■□□□ 1.19
LTBP3-206ENST00000526825 C8orf37Q96NL8 207 aa22.47■■□□□ 1.19
LTBP3-206ENST00000526825 QTRT2Q9H974 415 aaKnown RBP22.46■■□□□ 1.19
LTBP3-206ENST00000526825 SPATA31E1Q6ZUB1 1445 aa22.46■■□□□ 1.19
LTBP3-206ENST00000526825 CCDC144AA2RUR9 1427 aa22.45■■□□□ 1.18
LTBP3-206ENST00000526825 LAMC1P11047 1609 aa22.45■■□□□ 1.18
LTBP3-206ENST00000526825 CDK12Q9NYV4 1490 aaPredicted RBP22.44■■□□□ 1.18
LTBP3-206ENST00000526825 WAPLQ7Z5K2 1190 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms