RNA–Protein interactions for RNA: ENST00000526545.5

AMBRA1-204, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 837 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-204ENST00000526545 IQGAP3Q86VI3 1631 aa16.92■□□□□ 0.3
AMBRA1-204ENST00000526545 PLEKHG1Q9ULL1 1385 aa16.92■□□□□ 0.3
AMBRA1-204ENST00000526545 PPP1R15AO75807 674 aaPredicted RBP16.92■□□□□ 0.3
AMBRA1-204ENST00000526545 PROSER2Q86WR7 435 aaPredicted RBP16.92■□□□□ 0.3
AMBRA1-204ENST00000526545 PPARGC1BQ86YN6 1023 aaKnown RBP16.92■□□□□ 0.3
AMBRA1-204ENST00000526545 TMEM131LA2VDJ0 1609 aa16.92■□□□□ 0.3
AMBRA1-204ENST00000526545 TMEM94Q12767 1356 aa16.91■□□□□ 0.3
AMBRA1-204ENST00000526545 RIMS2Q9UQ26 1411 aa16.91■□□□□ 0.3
AMBRA1-204ENST00000526545 NKTRP30414 1462 aaKnown RBP16.9■□□□□ 0.3
AMBRA1-204ENST00000526545 E9PCH4 1651 aa16.9■□□□□ 0.3
AMBRA1-204ENST00000526545 MED1Q15648 1581 aaPredicted RBP16.89■□□□□ 0.3
AMBRA1-204ENST00000526545 XIRP1Q702N8 1843 aaKnown RBP16.89■□□□□ 0.29
AMBRA1-204ENST00000526545 CHGAP10645 457 aaKnown RBP16.89■□□□□ 0.29
AMBRA1-204ENST00000526545 TBX22Q9Y458 520 aa16.89■□□□□ 0.29
AMBRA1-204ENST00000526545 FAM135BQ49AJ0 1406 aa16.88■□□□□ 0.29
AMBRA1-204ENST00000526545 NWD1Q149M9 1564 aa16.87■□□□□ 0.29
AMBRA1-204ENST00000526545 RRBP1Q9P2E9 1410 aaKnown RBP16.85■□□□□ 0.29
AMBRA1-204ENST00000526545 MYO5BQ9ULV0 1848 aa16.84■□□□□ 0.29
AMBRA1-204ENST00000526545 SENP3Q9H4L4 574 aaPredicted RBP16.84■□□□□ 0.29
AMBRA1-204ENST00000526545 MSH6P52701 1360 aa16.84■□□□□ 0.29
AMBRA1-204ENST00000526545 PIK3R4Q99570 1358 aa16.83■□□□□ 0.28
AMBRA1-204ENST00000526545 PHF23Q9BUL5 403 aaPredicted RBP16.83■□□□□ 0.28
AMBRA1-204ENST00000526545 NCOA3Q9Y6Q9 1424 aa16.83■□□□□ 0.28
AMBRA1-204ENST00000526545 RBM33Q96EV2 1170 aaKnown RBP16.82■□□□□ 0.28
AMBRA1-204ENST00000526545 CHD2O14647 1828 aaKnown RBP16.82■□□□□ 0.28
AMBRA1-204ENST00000526545 DIP2AQ14689 1571 aa16.81■□□□□ 0.28
AMBRA1-204ENST00000526545 SLAIN2Q9P270 581 aa16.81■□□□□ 0.28
AMBRA1-204ENST00000526545 ADAMTS13Q76LX8 1427 aa16.8■□□□□ 0.28
AMBRA1-204ENST00000526545 NUTM2DQ5VT03 806 aaPredicted RBP16.79■□□□□ 0.28
AMBRA1-204ENST00000526545 NAIPQ13075 1403 aa16.78■□□□□ 0.28
AMBRA1-204ENST00000526545 ROBO1Q9Y6N7 1651 aa16.77■□□□□ 0.28
AMBRA1-204ENST00000526545 SPHKAPQ2M3C7 1700 aa16.76■□□□□ 0.27
AMBRA1-204ENST00000526545 TRPM2O94759 1503 aa16.75■□□□□ 0.27
AMBRA1-204ENST00000526545 ZNF326Q5BKZ1 582 aaKnown RBP16.75■□□□□ 0.27
AMBRA1-204ENST00000526545 C14orf37Q86TY3 774 aa16.75■□□□□ 0.27
AMBRA1-204ENST00000526545 C19orf44Q9H6X5 657 aa16.75■□□□□ 0.27
AMBRA1-204ENST00000526545 AMOTL2Q9Y2J4 779 aa16.75■□□□□ 0.27
AMBRA1-204ENST00000526545 CADPS2Q86UW7 1296 aa16.74■□□□□ 0.27
AMBRA1-204ENST00000526545 HFM1A2PYH4 1435 aa16.73■□□□□ 0.27
AMBRA1-204ENST00000526545 ATF3P18847 181 aa16.72■□□□□ 0.27
AMBRA1-204ENST00000526545 SETBP1Q9Y6X0 1596 aa16.72■□□□□ 0.27
AMBRA1-204ENST00000526545 TRIM52Q96A61 297 aa16.71■□□□□ 0.27
AMBRA1-204ENST00000526545 PTPRUQ92729 1446 aa16.7■□□□□ 0.26
AMBRA1-204ENST00000526545 RGS17Q9UGC6 210 aaPredicted RBP16.69■□□□□ 0.26
AMBRA1-204ENST00000526545 JCADQ9P266 1359 aa16.68■□□□□ 0.26
AMBRA1-204ENST00000526545 CLTCL1P53675 1640 aa16.68■□□□□ 0.26
AMBRA1-204ENST00000526545 SLC4A1APQ9BWU0 796 aaKnown RBP16.68■□□□□ 0.26
AMBRA1-204ENST00000526545 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.67■□□□□ 0.26
AMBRA1-204ENST00000526545 NRXN3Q9Y4C0 1643 aa16.67■□□□□ 0.26
AMBRA1-204ENST00000526545 VGFO15240 615 aaPredicted RBP16.67■□□□□ 0.26
AMBRA1-204ENST00000526545 DCCP43146 1447 aa16.67■□□□□ 0.26
AMBRA1-204ENST00000526545 PHLPP1O60346 1717 aa16.67■□□□□ 0.26
AMBRA1-204ENST00000526545 NEXMIFQ5QGS0 1516 aa16.66■□□□□ 0.26
AMBRA1-204ENST00000526545 RPGRIP1LQ68CZ1 1315 aa16.66■□□□□ 0.26
AMBRA1-204ENST00000526545 METP08581 1390 aa16.65■□□□□ 0.26
AMBRA1-204ENST00000526545 KIF1BO60333 1816 aa16.65■□□□□ 0.26
AMBRA1-204ENST00000526545 XRN1Q8IZH2 1706 aaKnown RBP16.65■□□□□ 0.26
AMBRA1-204ENST00000526545 SPATA31A6Q5VVP1 1343 aa16.62■□□□□ 0.25
AMBRA1-204ENST00000526545 COL16A1Q07092 1604 aaPredicted RBP16.62■□□□□ 0.25
AMBRA1-204ENST00000526545 AHDC1Q5TGY3 1603 aaPredicted RBP16.62■□□□□ 0.25
AMBRA1-204ENST00000526545 BRINP3Q76B58 766 aa16.61■□□□□ 0.25
AMBRA1-204ENST00000526545 ACIN1Q9UKV3 1341 aaKnown RBP16.61■□□□□ 0.25
AMBRA1-204ENST00000526545 POTEAQ6S8J7 498 aa16.59■□□□□ 0.25
AMBRA1-204ENST00000526545 ADGRL3Q9HAR2 1447 aa16.58■□□□□ 0.24
AMBRA1-204ENST00000526545 MST1RQ04912 1400 aa16.57■□□□□ 0.24
AMBRA1-204ENST00000526545 ASXL1Q8IXJ9 1541 aa16.55■□□□□ 0.24
AMBRA1-204ENST00000526545 PTCH1Q13635 1447 aa16.55■□□□□ 0.24
AMBRA1-204ENST00000526545 MPHOSPH9Q99550 1183 aa16.55■□□□□ 0.24
AMBRA1-204ENST00000526545 CCDC144AA2RUR9 1427 aa16.54■□□□□ 0.24
AMBRA1-204ENST00000526545 PRAG1Q86YV5 1406 aa16.54■□□□□ 0.24
AMBRA1-204ENST00000526545 SHPRHQ149N8 1683 aa16.54■□□□□ 0.24
AMBRA1-204ENST00000526545 FOXD1Q16676 465 aa16.54■□□□□ 0.24
AMBRA1-204ENST00000526545 MEX3CQ5U5Q3 659 aaKnown RBP16.54■□□□□ 0.24
AMBRA1-204ENST00000526545 LRRC59Q96AG4 307 aaKnown RBP16.54■□□□□ 0.24
AMBRA1-204ENST00000526545 SETD5Q9C0A6 1442 aa16.53■□□□□ 0.24
AMBRA1-204ENST00000526545 PPLO60437 1756 aa16.52■□□□□ 0.24
AMBRA1-204ENST00000526545 ZNF772Q68DY9 489 aaPredicted RBP16.52■□□□□ 0.24
AMBRA1-204ENST00000526545 ANKRD30BQ9BXX2 1392 aa16.51■□□□□ 0.23
AMBRA1-204ENST00000526545 ROBO2Q9HCK4 1378 aa16.51■□□□□ 0.23
AMBRA1-204ENST00000526545 SETD1AO15047 1707 aaKnown RBP16.51■□□□□ 0.23
AMBRA1-204ENST00000526545 NALCNQ8IZF0 1738 aa16.51■□□□□ 0.23
AMBRA1-204ENST00000526545 LRP6O75581 1613 aa16.51■□□□□ 0.23
AMBRA1-204ENST00000526545 NHSL1Q5SYE7 1610 aa16.5■□□□□ 0.23
AMBRA1-204ENST00000526545 C1orf167Q5SNV9 1468 aa16.49■□□□□ 0.23
AMBRA1-204ENST00000526545 RGL3Q3MIN7 710 aa16.49■□□□□ 0.23
AMBRA1-204ENST00000526545 SPATA31E1Q6ZUB1 1445 aa16.49■□□□□ 0.23
AMBRA1-204ENST00000526545 ADGRF5Q8IZF2 1346 aa16.47■□□□□ 0.23
AMBRA1-204ENST00000526545 NUTM2BA6NNL0 878 aaPredicted RBP16.47■□□□□ 0.23
AMBRA1-204ENST00000526545 NUTM2EB1AL46 878 aaPredicted RBP16.47■□□□□ 0.23
AMBRA1-204ENST00000526545 NUTM2AQ8IVF1 878 aaPredicted RBP16.47■□□□□ 0.23
AMBRA1-204ENST00000526545 DDX17Q92841 729 aaKnown RBP16.44■□□□□ 0.22
AMBRA1-204ENST00000526545 ORAI2Q96SN7 254 aa16.44■□□□□ 0.22
AMBRA1-204ENST00000526545 LAMC1P11047 1609 aa16.44■□□□□ 0.22
AMBRA1-204ENST00000526545 TECPR2O15040 1411 aa16.44■□□□□ 0.22
AMBRA1-204ENST00000526545 LRPPRCP42704 1394 aaKnown RBP16.43■□□□□ 0.22
AMBRA1-204ENST00000526545 PNPLA6Q8IY17 1366 aa16.43■□□□□ 0.22
AMBRA1-204ENST00000526545 ABCC11Q96J66 1382 aa16.43■□□□□ 0.22
AMBRA1-204ENST00000526545 SOS2Q07890 1332 aaPredicted RBP16.43■□□□□ 0.22
AMBRA1-204ENST00000526545 RXRBP28702 533 aa16.42■□□□□ 0.22
AMBRA1-204ENST00000526545 PIK3C2GO75747 1445 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms