RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 ILDR1Q86SU0 546 aaPredicted RBP18.96■□□□□ 0.63
SMPD1-202ENST00000526280 MED14O60244 1454 aa18.96■□□□□ 0.63
SMPD1-202ENST00000526280 NEURL4Q96JN8 1562 aa18.95■□□□□ 0.62
SMPD1-202ENST00000526280 ZNF326Q5BKZ1 582 aaKnown RBP18.95■□□□□ 0.62
SMPD1-202ENST00000526280 DHX57Q6P158 1386 aaKnown RBP18.94■□□□□ 0.62
SMPD1-202ENST00000526280 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.94■□□□□ 0.62
SMPD1-202ENST00000526280 NPHP4O75161 1426 aaPredicted RBP18.93■□□□□ 0.62
SMPD1-202ENST00000526280 SPATA31E1Q6ZUB1 1445 aa18.92■□□□□ 0.62
SMPD1-202ENST00000526280 PPP1R15AO75807 674 aaPredicted RBP18.9■□□□□ 0.62
SMPD1-202ENST00000526280 NUTM2DQ5VT03 806 aaPredicted RBP18.9■□□□□ 0.62
SMPD1-202ENST00000526280 RPGRIP1LQ68CZ1 1315 aa18.9■□□□□ 0.62
SMPD1-202ENST00000526280 RGL3Q3MIN7 710 aa18.89■□□□□ 0.61
SMPD1-202ENST00000526280 IQGAP1P46940 1657 aa18.88■□□□□ 0.61
SMPD1-202ENST00000526280 NEXMIFQ5QGS0 1516 aa18.88■□□□□ 0.61
SMPD1-202ENST00000526280 PLEKHG1Q9ULL1 1385 aa18.87■□□□□ 0.61
SMPD1-202ENST00000526280 VGFO15240 615 aaPredicted RBP18.85■□□□□ 0.61
SMPD1-202ENST00000526280 CERKQ8TCT0 537 aa18.83■□□□□ 0.61
SMPD1-202ENST00000526280 FBXO41Q8TF61 875 aa18.83■□□□□ 0.61
SMPD1-202ENST00000526280 BCANQ96GW7 911 aa18.83■□□□□ 0.61
SMPD1-202ENST00000526280 PPLO60437 1756 aa18.83■□□□□ 0.6
SMPD1-202ENST00000526280 SLC26A8Q96RN1 970 aa18.82■□□□□ 0.6
SMPD1-202ENST00000526280 SENP3Q9H4L4 574 aaPredicted RBP18.82■□□□□ 0.6
SMPD1-202ENST00000526280 SIN3AQ96ST3 1273 aa18.81■□□□□ 0.6
SMPD1-202ENST00000526280 TBX22Q9Y458 520 aa18.8■□□□□ 0.6
SMPD1-202ENST00000526280 ZNF335Q9H4Z2 1342 aaPredicted RBP18.8■□□□□ 0.6
SMPD1-202ENST00000526280 ADAMTS13Q76LX8 1427 aa18.8■□□□□ 0.6
SMPD1-202ENST00000526280 IFT172Q9UG01 1749 aa18.79■□□□□ 0.6
SMPD1-202ENST00000526280 SETBP1Q9Y6X0 1596 aa18.78■□□□□ 0.6
SMPD1-202ENST00000526280 ADGRF5Q8IZF2 1346 aa18.78■□□□□ 0.6
SMPD1-202ENST00000526280 NEUROD1Q13562 356 aa18.76■□□□□ 0.59
SMPD1-202ENST00000526280 NRXN3Q9Y4C0 1643 aa18.76■□□□□ 0.59
SMPD1-202ENST00000526280 DCAF11Q8TEB1 546 aa18.75■□□□□ 0.59
SMPD1-202ENST00000526280 STAC3Q96MF2 364 aa18.75■□□□□ 0.59
SMPD1-202ENST00000526280 LTBP4Q8N2S1 1624 aa18.75■□□□□ 0.59
SMPD1-202ENST00000526280 DIP2AQ14689 1571 aa18.75■□□□□ 0.59
SMPD1-202ENST00000526280 MYOM2P54296 1465 aa18.74■□□□□ 0.59
SMPD1-202ENST00000526280 KDM2AQ9Y2K7 1162 aa18.74■□□□□ 0.59
SMPD1-202ENST00000526280 KCNA6P17658 529 aa18.73■□□□□ 0.59
SMPD1-202ENST00000526280 NRXN1Q9ULB1 1477 aa18.72■□□□□ 0.59
SMPD1-202ENST00000526280 PIK3R4Q99570 1358 aa18.72■□□□□ 0.59
SMPD1-202ENST00000526280 PIK3C2GO75747 1445 aa18.72■□□□□ 0.59
SMPD1-202ENST00000526280 L3MBTL2Q969R5 705 aa18.71■□□□□ 0.59
SMPD1-202ENST00000526280 CLSPNQ9HAW4 1339 aa18.7■□□□□ 0.58
SMPD1-202ENST00000526280 STRCP1A6NGW2 1772 aa18.7■□□□□ 0.58
SMPD1-202ENST00000526280 METP08581 1390 aa18.7■□□□□ 0.58
SMPD1-202ENST00000526280 ALKQ9UM73 1620 aa18.7■□□□□ 0.58
SMPD1-202ENST00000526280 CPS1P31327 1500 aa18.7■□□□□ 0.58
SMPD1-202ENST00000526280 CHD2O14647 1828 aaKnown RBP18.69■□□□□ 0.58
SMPD1-202ENST00000526280 CCER1Q8TC90 406 aaPredicted RBP18.68■□□□□ 0.58
SMPD1-202ENST00000526280 C14orf93Q9H972 538 aaKnown RBP18.68■□□□□ 0.58
SMPD1-202ENST00000526280 PTPRUQ92729 1446 aa18.67■□□□□ 0.58
SMPD1-202ENST00000526280 SETD1AO15047 1707 aaKnown RBP18.67■□□□□ 0.58
SMPD1-202ENST00000526280 NWD1Q149M9 1564 aa18.66■□□□□ 0.58
SMPD1-202ENST00000526280 CFAP70Q5T0N1 1121 aa18.66■□□□□ 0.58
SMPD1-202ENST00000526280 AMOTL2Q9Y2J4 779 aa18.66■□□□□ 0.58
SMPD1-202ENST00000526280 LRRC7Q96NW7 1537 aa18.64■□□□□ 0.57
SMPD1-202ENST00000526280 NKTRP30414 1462 aaKnown RBP18.63■□□□□ 0.57
SMPD1-202ENST00000526280 PROSER2Q86WR7 435 aaPredicted RBP18.63■□□□□ 0.57
SMPD1-202ENST00000526280 TONSLQ96HA7 1378 aa18.62■□□□□ 0.57
SMPD1-202ENST00000526280 TMEM132EQ6IEE7 984 aa18.62■□□□□ 0.57
SMPD1-202ENST00000526280 PRAG1Q86YV5 1406 aa18.61■□□□□ 0.57
SMPD1-202ENST00000526280 LAMC1P11047 1609 aa18.61■□□□□ 0.57
SMPD1-202ENST00000526280 IQSEC2Q5JU85 1478 aa18.61■□□□□ 0.57
SMPD1-202ENST00000526280 XRN1Q8IZH2 1706 aaKnown RBP18.61■□□□□ 0.57
SMPD1-202ENST00000526280 ASXL1Q8IXJ9 1541 aa18.6■□□□□ 0.57
SMPD1-202ENST00000526280 TMEM94Q12767 1356 aa18.59■□□□□ 0.57
SMPD1-202ENST00000526280 RBM33Q96EV2 1170 aaKnown RBP18.58■□□□□ 0.57
SMPD1-202ENST00000526280 LRPPRCP42704 1394 aaKnown RBP18.58■□□□□ 0.56
SMPD1-202ENST00000526280 ABCC11Q96J66 1382 aa18.57■□□□□ 0.56
SMPD1-202ENST00000526280 YTHDC2Q9H6S0 1430 aaKnown RBP18.56■□□□□ 0.56
SMPD1-202ENST00000526280 STK26Q9P289 416 aa18.56■□□□□ 0.56
SMPD1-202ENST00000526280 TIMELESSQ9UNS1 1208 aa18.56■□□□□ 0.56
SMPD1-202ENST00000526280 XIRP1Q702N8 1843 aaKnown RBP18.56■□□□□ 0.56
SMPD1-202ENST00000526280 ADGRB1O14514 1584 aa18.56■□□□□ 0.56
SMPD1-202ENST00000526280 NCOA3Q9Y6Q9 1424 aa18.55■□□□□ 0.56
SMPD1-202ENST00000526280 ROBO2Q9HCK4 1378 aa18.55■□□□□ 0.56
SMPD1-202ENST00000526280 KIAA1210Q9ULL0 1709 aa18.55■□□□□ 0.56
SMPD1-202ENST00000526280 TECPR2O15040 1411 aa18.55■□□□□ 0.56
SMPD1-202ENST00000526280 PTCH1Q13635 1447 aa18.55■□□□□ 0.56
SMPD1-202ENST00000526280 UBAP1LF5GYI3 381 aa18.54■□□□□ 0.56
SMPD1-202ENST00000526280 NBPF1Q3BBV0 1214 aa18.53■□□□□ 0.56
SMPD1-202ENST00000526280 NBPF8Q3BBV2 869 aa18.53■□□□□ 0.56
SMPD1-202ENST00000526280 SIRT1Q96EB6 747 aa18.52■□□□□ 0.56
SMPD1-202ENST00000526280 KNDC1Q76NI1 1749 aa18.51■□□□□ 0.55
SMPD1-202ENST00000526280 WAPLQ7Z5K2 1190 aa18.49■□□□□ 0.55
SMPD1-202ENST00000526280 C14orf37Q86TY3 774 aa18.49■□□□□ 0.55
SMPD1-202ENST00000526280 C19orf44Q9H6X5 657 aa18.49■□□□□ 0.55
SMPD1-202ENST00000526280 TRPM1Q7Z4N2 1603 aa18.49■□□□□ 0.55
SMPD1-202ENST00000526280 MSH6P52701 1360 aa18.49■□□□□ 0.55
SMPD1-202ENST00000526280 FAM135BQ49AJ0 1406 aa18.49■□□□□ 0.55
SMPD1-202ENST00000526280 TRAK1Q9UPV9 953 aa18.49■□□□□ 0.55
SMPD1-202ENST00000526280 TOM1O60784 492 aa18.48■□□□□ 0.55
SMPD1-202ENST00000526280 DLC1Q96QB1 1528 aa18.47■□□□□ 0.55
SMPD1-202ENST00000526280 PLEKHH1Q9ULM0 1364 aa18.46■□□□□ 0.55
SMPD1-202ENST00000526280 ADGRL3Q9HAR2 1447 aa18.46■□□□□ 0.55
SMPD1-202ENST00000526280 PRAM1Q96QH2 718 aa18.46■□□□□ 0.55
SMPD1-202ENST00000526280 ROCK2O75116 1388 aaKnown RBP18.45■□□□□ 0.54
SMPD1-202ENST00000526280 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.44■□□□□ 0.54
SMPD1-202ENST00000526280 ATF3P18847 181 aa18.44■□□□□ 0.54
SMPD1-202ENST00000526280 CADPS2Q86UW7 1296 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms