RNA–Protein interactions for RNA: ENST00000526279.5

PDZD3-204, Transcript of PDZ domain containing 3, humanhuman

TSL 4

Gene PDZD3, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-204ENST00000526279 ZFYVE9O95405 1425 aa21.8■■□□□ 1.08
PDZD3-204ENST00000526279 ADGRL2O95490 1459 aa21.79■■□□□ 1.08
PDZD3-204ENST00000526279 ANKRD30AQ9BXX3 1397 aa21.79■■□□□ 1.08
PDZD3-204ENST00000526279 PROSER2Q86WR7 435 aaPredicted RBP21.79■■□□□ 1.08
PDZD3-204ENST00000526279 RPRD2Q5VT52 1461 aaKnown RBP21.78■■□□□ 1.08
PDZD3-204ENST00000526279 MSH6P52701 1360 aa21.78■■□□□ 1.08
PDZD3-204ENST00000526279 TMEM131LA2VDJ0 1609 aa21.77■■□□□ 1.08
PDZD3-204ENST00000526279 LOC105371045A0A1W2PR82 267 aa21.76■■□□□ 1.07
PDZD3-204ENST00000526279 PLEKHG1Q9ULL1 1385 aa21.74■■□□□ 1.07
PDZD3-204ENST00000526279 JCADQ9P266 1359 aa21.74■■□□□ 1.07
PDZD3-204ENST00000526279 LRP6O75581 1613 aa21.73■■□□□ 1.07
PDZD3-204ENST00000526279 SLC52A1Q9NWF4 448 aa21.72■■□□□ 1.07
PDZD3-204ENST00000526279 CHIC2Q9UKJ5 165 aa21.72■■□□□ 1.07
PDZD3-204ENST00000526279 AHDC1Q5TGY3 1603 aaPredicted RBP21.71■■□□□ 1.07
PDZD3-204ENST00000526279 SHPRHQ149N8 1683 aa21.71■■□□□ 1.07
PDZD3-204ENST00000526279 RIMS2Q9UQ26 1411 aa21.71■■□□□ 1.07
PDZD3-204ENST00000526279 UNC13BO14795 1591 aa21.7■■□□□ 1.06
PDZD3-204ENST00000526279 SLAIN2Q9P270 581 aa21.7■■□□□ 1.06
PDZD3-204ENST00000526279 DIP2AQ14689 1571 aa21.7■■□□□ 1.06
PDZD3-204ENST00000526279 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.69■■□□□ 1.06
PDZD3-204ENST00000526279 E9PCH4 1651 aa21.67■■□□□ 1.06
PDZD3-204ENST00000526279 ANKRD50Q9ULJ7 1429 aa21.67■■□□□ 1.06
PDZD3-204ENST00000526279 ADAMTS13Q76LX8 1427 aa21.66■■□□□ 1.06
PDZD3-204ENST00000526279 NCOA3Q9Y6Q9 1424 aa21.66■■□□□ 1.06
PDZD3-204ENST00000526279 BCANQ96GW7 911 aa21.64■■□□□ 1.05
PDZD3-204ENST00000526279 PPP1R15AO75807 674 aaPredicted RBP21.61■■□□□ 1.05
PDZD3-204ENST00000526279 IQGAP3Q86VI3 1631 aa21.61■■□□□ 1.05
PDZD3-204ENST00000526279 SPATA31A6Q5VVP1 1343 aa21.6■■□□□ 1.05
PDZD3-204ENST00000526279 TBX22Q9Y458 520 aa21.6■■□□□ 1.05
PDZD3-204ENST00000526279 APLP2Q06481 763 aa21.59■■□□□ 1.05
PDZD3-204ENST00000526279 XRN1Q8IZH2 1706 aaKnown RBP21.59■■□□□ 1.05
PDZD3-204ENST00000526279 TRPM2O94759 1503 aa21.59■■□□□ 1.05
PDZD3-204ENST00000526279 PIK3R4Q99570 1358 aa21.58■■□□□ 1.04
PDZD3-204ENST00000526279 NRXN3Q9Y4C0 1643 aa21.58■■□□□ 1.04
PDZD3-204ENST00000526279 NHSL1Q5SYE7 1610 aa21.56■■□□□ 1.04
PDZD3-204ENST00000526279 PTPRUQ92729 1446 aa21.55■■□□□ 1.04
PDZD3-204ENST00000526279 ASXL1Q8IXJ9 1541 aa21.54■■□□□ 1.04
PDZD3-204ENST00000526279 HDGFP51858 240 aaKnown RBP21.53■■□□□ 1.04
PDZD3-204ENST00000526279 C14orf37Q86TY3 774 aa21.53■■□□□ 1.04
PDZD3-204ENST00000526279 CADPS2Q86UW7 1296 aa21.53■■□□□ 1.04
PDZD3-204ENST00000526279 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.53■■□□□ 1.04
PDZD3-204ENST00000526279 DCCP43146 1447 aa21.53■■□□□ 1.04
PDZD3-204ENST00000526279 SRCAPQ6ZRS2 3230 aa21.53■■□□□ 1.04
PDZD3-204ENST00000526279 ZNF772Q68DY9 489 aaPredicted RBP21.52■■□□□ 1.04
PDZD3-204ENST00000526279 UPF1Q92900 1129 aaKnown RBP eCLIP21.52■■□□□ 1.04
PDZD3-204ENST00000526279 C19orf44Q9H6X5 657 aa21.52■■□□□ 1.04
PDZD3-204ENST00000526279 SETBP1Q9Y6X0 1596 aa21.52■■□□□ 1.04
PDZD3-204ENST00000526279 CDK12Q9NYV4 1490 aaPredicted RBP21.52■■□□□ 1.03
PDZD3-204ENST00000526279 FAM50AQ14320 339 aaKnown RBP21.51■■□□□ 1.03
PDZD3-204ENST00000526279 MEX3CQ5U5Q3 659 aaKnown RBP21.51■■□□□ 1.03
PDZD3-204ENST00000526279 NUTM2DQ5VT03 806 aaPredicted RBP21.51■■□□□ 1.03
PDZD3-204ENST00000526279 ATF3P18847 181 aa21.49■■□□□ 1.03
PDZD3-204ENST00000526279 BRINP3Q76B58 766 aa21.49■■□□□ 1.03
PDZD3-204ENST00000526279 TRIM52Q96A61 297 aa21.49■■□□□ 1.03
PDZD3-204ENST00000526279 CHGAP10645 457 aaKnown RBP21.48■■□□□ 1.03
PDZD3-204ENST00000526279 SPHKAPQ2M3C7 1700 aa21.48■■□□□ 1.03
PDZD3-204ENST00000526279 MST1RQ04912 1400 aa21.47■■□□□ 1.03
PDZD3-204ENST00000526279 NALCNQ8IZF0 1738 aa21.47■■□□□ 1.03
PDZD3-204ENST00000526279 SETD5Q9C0A6 1442 aa21.46■■□□□ 1.03
PDZD3-204ENST00000526279 ROCK1Q13464 1354 aa21.46■■□□□ 1.03
PDZD3-204ENST00000526279 AMOTL2Q9Y2J4 779 aa21.44■■□□□ 1.02
PDZD3-204ENST00000526279 RGS12O14924 1447 aa21.41■■□□□ 1.02
PDZD3-204ENST00000526279 RXRBP28702 533 aa21.41■■□□□ 1.02
PDZD3-204ENST00000526279 ADGRL3Q9HAR2 1447 aa21.4■■□□□ 1.02
PDZD3-204ENST00000526279 AFF2P51816 1311 aa21.4■■□□□ 1.02
PDZD3-204ENST00000526279 LAMC1P11047 1609 aa21.4■■□□□ 1.02
PDZD3-204ENST00000526279 NUTM2BA6NNL0 878 aaPredicted RBP21.39■■□□□ 1.01
PDZD3-204ENST00000526279 NUTM2EB1AL46 878 aaPredicted RBP21.39■■□□□ 1.01
PDZD3-204ENST00000526279 NUTM2AQ8IVF1 878 aaPredicted RBP21.39■■□□□ 1.01
PDZD3-204ENST00000526279 NEXMIFQ5QGS0 1516 aa21.38■■□□□ 1.01
PDZD3-204ENST00000526279 EP400Q96L91 3159 aa21.38■■□□□ 1.01
PDZD3-204ENST00000526279 NUP155O75694 1391 aa21.37■■□□□ 1.01
PDZD3-204ENST00000526279 METP08581 1390 aa21.37■■□□□ 1.01
PDZD3-204ENST00000526279 CLTCL1P53675 1640 aa21.37■■□□□ 1.01
PDZD3-204ENST00000526279 PNPLA6Q8IY17 1366 aa21.36■■□□□ 1.01
PDZD3-204ENST00000526279 DDX17Q92841 729 aaKnown RBP21.31■■□□□ 1
PDZD3-204ENST00000526279 LRRC59Q96AG4 307 aaKnown RBP21.3■■□□□ 1
PDZD3-204ENST00000526279 C8orf37Q96NL8 207 aa21.29■■□□□ 1
PDZD3-204ENST00000526279 KIF1BO60333 1816 aa21.29■■□□□ 1
PDZD3-204ENST00000526279 PTCH1Q13635 1447 aa21.29■■□□□ 1
PDZD3-204ENST00000526279 C1orf167Q5SNV9 1468 aa21.28■■□□□ 1
PDZD3-204ENST00000526279 COL22A1Q8NFW1 1626 aaPredicted RBP21.27■■□□□ 1
PDZD3-204ENST00000526279 RBM6P78332 1123 aaKnown RBP21.27■■□□□ 1
PDZD3-204ENST00000526279 PRAG1Q86YV5 1406 aa21.26■□□□□ 0.99
PDZD3-204ENST00000526279 ZNF326Q5BKZ1 582 aaKnown RBP21.24■□□□□ 0.99
PDZD3-204ENST00000526279 QTRT2Q9H974 415 aaKnown RBP21.24■□□□□ 0.99
PDZD3-204ENST00000526279 MARF1Q9Y4F3 1742 aaKnown RBP21.21■□□□□ 0.99
PDZD3-204ENST00000526279 ROBO2Q9HCK4 1378 aa21.21■□□□□ 0.99
PDZD3-204ENST00000526279 ADAMTS2O95450 1211 aa21.2■□□□□ 0.98
PDZD3-204ENST00000526279 SOS2Q07890 1332 aaPredicted RBP21.2■□□□□ 0.98
PDZD3-204ENST00000526279 ATAD2Q6PL18 1390 aa21.2■□□□□ 0.98
PDZD3-204ENST00000526279 PPLO60437 1756 aa21.18■□□□□ 0.98
PDZD3-204ENST00000526279 ITGAEP38570 1179 aa21.18■□□□□ 0.98
PDZD3-204ENST00000526279 MYOM2P54296 1465 aa21.18■□□□□ 0.98
PDZD3-204ENST00000526279 CDC42BPGQ6DT37 1551 aa21.18■□□□□ 0.98
PDZD3-204ENST00000526279 NGLY1Q96IV0 654 aa21.17■□□□□ 0.98
PDZD3-204ENST00000526279 ATRNO75882 1429 aa21.17■□□□□ 0.98
PDZD3-204ENST00000526279 ORAI2Q96SN7 254 aa21.15■□□□□ 0.98
PDZD3-204ENST00000526279 PXDNQ92626 1479 aa21.14■□□□□ 0.98
PDZD3-204ENST00000526279 FNBP4Q8N3X1 1017 aaPredicted RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms