RNA–Protein interactions for RNA: ENST00000525918.1

VPS26B-203, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-203ENST00000525918 PROSER2Q86WR7 435 aaPredicted RBP16.54■□□□□ 0.24
VPS26B-203ENST00000525918 BCANQ96GW7 911 aa16.53■□□□□ 0.24
VPS26B-203ENST00000525918 NWD1Q149M9 1564 aa16.52■□□□□ 0.24
VPS26B-203ENST00000525918 HDGFP51858 240 aaKnown RBP16.52■□□□□ 0.24
VPS26B-203ENST00000525918 NKTRP30414 1462 aaKnown RBP16.52■□□□□ 0.23
VPS26B-203ENST00000525918 CHD2O14647 1828 aaKnown RBP16.52■□□□□ 0.23
VPS26B-203ENST00000525918 ROBO1Q9Y6N7 1651 aa16.51■□□□□ 0.23
VPS26B-203ENST00000525918 UNC13BO14795 1591 aa16.51■□□□□ 0.23
VPS26B-203ENST00000525918 TMEM131LA2VDJ0 1609 aa16.5■□□□□ 0.23
VPS26B-203ENST00000525918 ZFYVE9O95405 1425 aa16.5■□□□□ 0.23
VPS26B-203ENST00000525918 RBM33Q96EV2 1170 aaKnown RBP16.49■□□□□ 0.23
VPS26B-203ENST00000525918 PLEKHG1Q9ULL1 1385 aa16.49■□□□□ 0.23
VPS26B-203ENST00000525918 E9PCH4 1651 aa16.47■□□□□ 0.23
VPS26B-203ENST00000525918 RIMS2Q9UQ26 1411 aa16.47■□□□□ 0.23
VPS26B-203ENST00000525918 PPP1R15AO75807 674 aaPredicted RBP16.47■□□□□ 0.23
VPS26B-203ENST00000525918 MSH6P52701 1360 aa16.47■□□□□ 0.23
VPS26B-203ENST00000525918 RGS17Q9UGC6 210 aaPredicted RBP16.46■□□□□ 0.23
VPS26B-203ENST00000525918 POTEDQ86YR6 584 aa16.45■□□□□ 0.22
VPS26B-203ENST00000525918 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.45■□□□□ 0.22
VPS26B-203ENST00000525918 TBX22Q9Y458 520 aa16.45■□□□□ 0.22
VPS26B-203ENST00000525918 ROCK1Q13464 1354 aa16.45■□□□□ 0.22
VPS26B-203ENST00000525918 IQGAP3Q86VI3 1631 aa16.45■□□□□ 0.22
VPS26B-203ENST00000525918 MSH5O43196 834 aa16.44■□□□□ 0.22
VPS26B-203ENST00000525918 SLAIN2Q9P270 581 aa16.44■□□□□ 0.22
VPS26B-203ENST00000525918 PHLPP1O60346 1717 aa16.43■□□□□ 0.22
VPS26B-203ENST00000525918 CHGAP10645 457 aaKnown RBP16.43■□□□□ 0.22
VPS26B-203ENST00000525918 NCOA3Q9Y6Q9 1424 aa16.41■□□□□ 0.22
VPS26B-203ENST00000525918 DIP2AQ14689 1571 aa16.4■□□□□ 0.22
VPS26B-203ENST00000525918 NUP155O75694 1391 aa16.39■□□□□ 0.21
VPS26B-203ENST00000525918 ADAMTS13Q76LX8 1427 aa16.38■□□□□ 0.21
VPS26B-203ENST00000525918 NUTM2DQ5VT03 806 aaPredicted RBP16.38■□□□□ 0.21
VPS26B-203ENST00000525918 PIK3R4Q99570 1358 aa16.38■□□□□ 0.21
VPS26B-203ENST00000525918 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.37■□□□□ 0.21
VPS26B-203ENST00000525918 C14orf37Q86TY3 774 aa16.37■□□□□ 0.21
VPS26B-203ENST00000525918 ITGAEP38570 1179 aa16.36■□□□□ 0.21
VPS26B-203ENST00000525918 POTEAQ6S8J7 498 aa16.36■□□□□ 0.21
VPS26B-203ENST00000525918 JCADQ9P266 1359 aa16.36■□□□□ 0.21
VPS26B-203ENST00000525918 C19orf44Q9H6X5 657 aa16.35■□□□□ 0.21
VPS26B-203ENST00000525918 TRPM2O94759 1503 aa16.35■□□□□ 0.21
VPS26B-203ENST00000525918 COL16A1Q07092 1604 aaPredicted RBP16.34■□□□□ 0.21
VPS26B-203ENST00000525918 SPHKAPQ2M3C7 1700 aa16.34■□□□□ 0.21
VPS26B-203ENST00000525918 CADPS2Q86UW7 1296 aa16.34■□□□□ 0.21
VPS26B-203ENST00000525918 ATF3P18847 181 aa16.33■□□□□ 0.2
VPS26B-203ENST00000525918 AMOTL2Q9Y2J4 779 aa16.32■□□□□ 0.2
VPS26B-203ENST00000525918 AHDC1Q5TGY3 1603 aaPredicted RBP16.3■□□□□ 0.2
VPS26B-203ENST00000525918 NRXN3Q9Y4C0 1643 aa16.3■□□□□ 0.2
VPS26B-203ENST00000525918 PTPRUQ92729 1446 aa16.29■□□□□ 0.2
VPS26B-203ENST00000525918 SPATA31A6Q5VVP1 1343 aa16.29■□□□□ 0.2
VPS26B-203ENST00000525918 PPARGC1BQ86YN6 1023 aaKnown RBP16.29■□□□□ 0.2
VPS26B-203ENST00000525918 SETBP1Q9Y6X0 1596 aa16.29■□□□□ 0.2
VPS26B-203ENST00000525918 XRN1Q8IZH2 1706 aaKnown RBP16.28■□□□□ 0.2
VPS26B-203ENST00000525918 SHPRHQ149N8 1683 aa16.28■□□□□ 0.2
VPS26B-203ENST00000525918 ZNF326Q5BKZ1 582 aaKnown RBP16.27■□□□□ 0.2
VPS26B-203ENST00000525918 DCCP43146 1447 aa16.27■□□□□ 0.19
VPS26B-203ENST00000525918 KIF1BO60333 1816 aa16.26■□□□□ 0.19
VPS26B-203ENST00000525918 LRP6O75581 1613 aa16.25■□□□□ 0.19
VPS26B-203ENST00000525918 MEX3CQ5U5Q3 659 aaKnown RBP16.24■□□□□ 0.19
VPS26B-203ENST00000525918 BRINP3Q76B58 766 aa16.24■□□□□ 0.19
VPS26B-203ENST00000525918 SETD1AO15047 1707 aaKnown RBP16.24■□□□□ 0.19
VPS26B-203ENST00000525918 CLTCL1P53675 1640 aa16.23■□□□□ 0.19
VPS26B-203ENST00000525918 ZNF772Q68DY9 489 aaPredicted RBP16.23■□□□□ 0.19
VPS26B-203ENST00000525918 NEXMIFQ5QGS0 1516 aa16.22■□□□□ 0.19
VPS26B-203ENST00000525918 METP08581 1390 aa16.22■□□□□ 0.19
VPS26B-203ENST00000525918 NHSL1Q5SYE7 1610 aa16.21■□□□□ 0.19
VPS26B-203ENST00000525918 PIAS4Q8N2W9 510 aaPredicted RBP16.21■□□□□ 0.19
VPS26B-203ENST00000525918 MST1RQ04912 1400 aa16.2■□□□□ 0.18
VPS26B-203ENST00000525918 ASXL1Q8IXJ9 1541 aa16.2■□□□□ 0.18
VPS26B-203ENST00000525918 NAIPQ13075 1403 aa16.19■□□□□ 0.18
VPS26B-203ENST00000525918 RRBP1Q9P2E9 1410 aaKnown RBP16.19■□□□□ 0.18
VPS26B-203ENST00000525918 SETD5Q9C0A6 1442 aa16.19■□□□□ 0.18
VPS26B-203ENST00000525918 NALCNQ8IZF0 1738 aa16.18■□□□□ 0.18
VPS26B-203ENST00000525918 ADGRL3Q9HAR2 1447 aa16.18■□□□□ 0.18
VPS26B-203ENST00000525918 LRRC59Q96AG4 307 aaKnown RBP16.17■□□□□ 0.18
VPS26B-203ENST00000525918 NUTM2BA6NNL0 878 aaPredicted RBP16.16■□□□□ 0.18
VPS26B-203ENST00000525918 NUTM2EB1AL46 878 aaPredicted RBP16.16■□□□□ 0.18
VPS26B-203ENST00000525918 VGFO15240 615 aaPredicted RBP16.16■□□□□ 0.18
VPS26B-203ENST00000525918 NUTM2AQ8IVF1 878 aaPredicted RBP16.16■□□□□ 0.18
VPS26B-203ENST00000525918 RXRBP28702 533 aa16.14■□□□□ 0.17
VPS26B-203ENST00000525918 TRIM52Q96A61 297 aa16.14■□□□□ 0.17
VPS26B-203ENST00000525918 RPGRIP1LQ68CZ1 1315 aa16.13■□□□□ 0.17
VPS26B-203ENST00000525918 PPLO60437 1756 aa16.12■□□□□ 0.17
VPS26B-203ENST00000525918 HFM1A2PYH4 1435 aa16.11■□□□□ 0.17
VPS26B-203ENST00000525918 PTCH1Q13635 1447 aa16.11■□□□□ 0.17
VPS26B-203ENST00000525918 DDX17Q92841 729 aaKnown RBP16.11■□□□□ 0.17
VPS26B-203ENST00000525918 AFF2P51816 1311 aa16.11■□□□□ 0.17
VPS26B-203ENST00000525918 LAMC1P11047 1609 aa16.11■□□□□ 0.17
VPS26B-203ENST00000525918 CDK12Q9NYV4 1490 aaPredicted RBP16.1■□□□□ 0.17
VPS26B-203ENST00000525918 UPF1Q92900 1129 aaKnown RBP eCLIP16.1■□□□□ 0.17
VPS26B-203ENST00000525918 SLC4A1APQ9BWU0 796 aaKnown RBP16.1■□□□□ 0.17
VPS26B-203ENST00000525918 PNPLA6Q8IY17 1366 aa16.1■□□□□ 0.17
VPS26B-203ENST00000525918 C1orf167Q5SNV9 1468 aa16.1■□□□□ 0.17
VPS26B-203ENST00000525918 ROBO2Q9HCK4 1378 aa16.09■□□□□ 0.17
VPS26B-203ENST00000525918 C8orf37Q96NL8 207 aa16.08■□□□□ 0.16
VPS26B-203ENST00000525918 PRAG1Q86YV5 1406 aa16.08■□□□□ 0.16
VPS26B-203ENST00000525918 ORAI2Q96SN7 254 aa16.06■□□□□ 0.16
VPS26B-203ENST00000525918 QTRT2Q9H974 415 aaKnown RBP16.06■□□□□ 0.16
VPS26B-203ENST00000525918 SOS2Q07890 1332 aaPredicted RBP16.05■□□□□ 0.16
VPS26B-203ENST00000525918 RBM6P78332 1123 aaKnown RBP16.04■□□□□ 0.16
VPS26B-203ENST00000525918 NGLY1Q96IV0 654 aa16.03■□□□□ 0.16
VPS26B-203ENST00000525918 ADAMTS2O95450 1211 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms