RNA–Protein interactions for RNA: ENST00000525798.1

PACS1-204, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 2

Gene PACS1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-204ENST00000525798 HDGFP51858 240 aaKnown RBP16.85■□□□□ 0.29
PACS1-204ENST00000525798 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.85■□□□□ 0.29
PACS1-204ENST00000525798 EID1Q9Y6B2 187 aa16.85■□□□□ 0.29
PACS1-204ENST00000525798 NCKAP5LQ9HCH0 1330 aa16.85■□□□□ 0.29
PACS1-204ENST00000525798 LMTK3Q96Q04 1460 aa16.85■□□□□ 0.29
PACS1-204ENST00000525798 VGFO15240 615 aaPredicted RBP16.84■□□□□ 0.29
PACS1-204ENST00000525798 NBPF8Q3BBV2 869 aa16.84■□□□□ 0.29
PACS1-204ENST00000525798 ANKLE2Q86XL3 938 aa16.84■□□□□ 0.29
PACS1-204ENST00000525798 ZFYVE9O95405 1425 aa16.84■□□□□ 0.29
PACS1-204ENST00000525798 UBR1Q8IWV7 1749 aa16.82■□□□□ 0.28
PACS1-204ENST00000525798 NEURL4Q96JN8 1562 aa16.82■□□□□ 0.28
PACS1-204ENST00000525798 ARHGAP23Q9P227 1491 aa16.82■□□□□ 0.28
PACS1-204ENST00000525798 BCANQ96GW7 911 aa16.82■□□□□ 0.28
PACS1-204ENST00000525798 SETD1BQ9UPS6 1966 aaKnown RBP16.82■□□□□ 0.28
PACS1-204ENST00000525798 NEXMIFQ5QGS0 1516 aa16.81■□□□□ 0.28
PACS1-204ENST00000525798 ZEB1P37275 1124 aaPredicted RBP16.81■□□□□ 0.28
PACS1-204ENST00000525798 STAC3Q96MF2 364 aa16.8■□□□□ 0.28
PACS1-204ENST00000525798 SLIT1O75093 1534 aa16.8■□□□□ 0.28
PACS1-204ENST00000525798 KIF1BO60333 1816 aa16.8■□□□□ 0.28
PACS1-204ENST00000525798 CFAP70Q5T0N1 1121 aa16.79■□□□□ 0.28
PACS1-204ENST00000525798 SCAF11Q99590 1463 aaKnown RBP16.78■□□□□ 0.28
PACS1-204ENST00000525798 ZNF142P52746 1687 aaPredicted RBP16.78■□□□□ 0.28
PACS1-204ENST00000525798 SLC26A8Q96RN1 970 aa16.77■□□□□ 0.28
PACS1-204ENST00000525798 PRAG1Q86YV5 1406 aa16.77■□□□□ 0.27
PACS1-204ENST00000525798 MYOM2P54296 1465 aa16.76■□□□□ 0.27
PACS1-204ENST00000525798 NBPF1Q3BBV0 1214 aa16.76■□□□□ 0.27
PACS1-204ENST00000525798 C14orf93Q9H972 538 aaKnown RBP16.76■□□□□ 0.27
PACS1-204ENST00000525798 PLEKHG1Q9ULL1 1385 aa16.76■□□□□ 0.27
PACS1-204ENST00000525798 KDM5AP29375 1690 aaKnown RBP16.75■□□□□ 0.27
PACS1-204ENST00000525798 MYO5BQ9ULV0 1848 aa16.75■□□□□ 0.27
PACS1-204ENST00000525798 NRXN1Q9ULB1 1477 aa16.74■□□□□ 0.27
PACS1-204ENST00000525798 PIK3C2GO75747 1445 aa16.74■□□□□ 0.27
PACS1-204ENST00000525798 TMEM132EQ6IEE7 984 aa16.74■□□□□ 0.27
PACS1-204ENST00000525798 NPHP4O75161 1426 aaPredicted RBP16.72■□□□□ 0.27
PACS1-204ENST00000525798 ADAMTS13Q76LX8 1427 aa16.7■□□□□ 0.26
PACS1-204ENST00000525798 PPLO60437 1756 aa16.7■□□□□ 0.26
PACS1-204ENST00000525798 TBX22Q9Y458 520 aa16.7■□□□□ 0.26
PACS1-204ENST00000525798 METP08581 1390 aa16.69■□□□□ 0.26
PACS1-204ENST00000525798 MED14O60244 1454 aa16.68■□□□□ 0.26
PACS1-204ENST00000525798 STK26Q9P289 416 aa16.68■□□□□ 0.26
PACS1-204ENST00000525798 IFT172Q9UG01 1749 aa16.67■□□□□ 0.26
PACS1-204ENST00000525798 ROCK2O75116 1388 aaKnown RBP16.67■□□□□ 0.26
PACS1-204ENST00000525798 CARD11Q9BXL7 1154 aa16.67■□□□□ 0.26
PACS1-204ENST00000525798 SETBP1Q9Y6X0 1596 aa16.65■□□□□ 0.26
PACS1-204ENST00000525798 ALKQ9UM73 1620 aa16.65■□□□□ 0.26
PACS1-204ENST00000525798 TRAK1Q9UPV9 953 aa16.64■□□□□ 0.25
PACS1-204ENST00000525798 RALGAPBQ86X10 1494 aa16.64■□□□□ 0.25
PACS1-204ENST00000525798 DMRT2Q9Y5R5 561 aa16.63■□□□□ 0.25
PACS1-204ENST00000525798 NRXN3Q9Y4C0 1643 aa16.63■□□□□ 0.25
PACS1-204ENST00000525798 AMOTL2Q9Y2J4 779 aa16.62■□□□□ 0.25
PACS1-204ENST00000525798 GPRASP1Q5JY77 1395 aa16.62■□□□□ 0.25
PACS1-204ENST00000525798 PTPRUQ92729 1446 aa16.62■□□□□ 0.25
PACS1-204ENST00000525798 ASXL1Q8IXJ9 1541 aa16.6■□□□□ 0.25
PACS1-204ENST00000525798 ADGRB1O14514 1584 aa16.6■□□□□ 0.25
PACS1-204ENST00000525798 STRCQ7RTU9 1775 aa16.6■□□□□ 0.25
PACS1-204ENST00000525798 LRPPRCP42704 1394 aaKnown RBP16.6■□□□□ 0.25
PACS1-204ENST00000525798 YTHDC2Q9H6S0 1430 aaKnown RBP16.6■□□□□ 0.25
PACS1-204ENST00000525798 IQGAP1P46940 1657 aa16.59■□□□□ 0.25
PACS1-204ENST00000525798 KCNA6P17658 529 aa16.59■□□□□ 0.25
PACS1-204ENST00000525798 HIRIP3Q9BW71 556 aaPredicted RBP16.59■□□□□ 0.25
PACS1-204ENST00000525798 TRPM1Q7Z4N2 1603 aa16.58■□□□□ 0.24
PACS1-204ENST00000525798 ABCC11Q96J66 1382 aa16.57■□□□□ 0.24
PACS1-204ENST00000525798 PIK3R4Q99570 1358 aa16.57■□□□□ 0.24
PACS1-204ENST00000525798 ZNF335Q9H4Z2 1342 aaPredicted RBP16.57■□□□□ 0.24
PACS1-204ENST00000525798 WAPLQ7Z5K2 1190 aa16.57■□□□□ 0.24
PACS1-204ENST00000525798 RBM33Q96EV2 1170 aaKnown RBP16.57■□□□□ 0.24
PACS1-204ENST00000525798 HSPA5P11021 654 aaKnown RBP16.56■□□□□ 0.24
PACS1-204ENST00000525798 SAFB2Q14151 953 aaKnown RBP eCLIP16.56■□□□□ 0.24
PACS1-204ENST00000525798 PRAM1Q96QH2 718 aa16.56■□□□□ 0.24
PACS1-204ENST00000525798 POLR1AO95602 1720 aaPredicted RBP16.56■□□□□ 0.24
PACS1-204ENST00000525798 USP47Q96K76 1375 aa16.55■□□□□ 0.24
PACS1-204ENST00000525798 ROBO2Q9HCK4 1378 aa16.55■□□□□ 0.24
PACS1-204ENST00000525798 ST20-MTHFSA0A0A6YYL1 179 aa16.55■□□□□ 0.24
PACS1-204ENST00000525798 EIF4G2P78344 907 aaKnown RBP eCLIP16.55■□□□□ 0.24
PACS1-204ENST00000525798 DIP2AQ14689 1571 aa16.55■□□□□ 0.24
PACS1-204ENST00000525798 PLEKHH1Q9ULM0 1364 aa16.54■□□□□ 0.24
PACS1-204ENST00000525798 POGKQ9P215 609 aa16.54■□□□□ 0.24
PACS1-204ENST00000525798 SETD1AO15047 1707 aaKnown RBP16.53■□□□□ 0.24
PACS1-204ENST00000525798 KIAA1210Q9ULL0 1709 aa16.53■□□□□ 0.24
PACS1-204ENST00000525798 PROSER2Q86WR7 435 aaPredicted RBP16.52■□□□□ 0.24
PACS1-204ENST00000525798 SIRT1Q96EB6 747 aa16.52■□□□□ 0.24
PACS1-204ENST00000525798 LAMC1P11047 1609 aa16.52■□□□□ 0.23
PACS1-204ENST00000525798 TECPR2O15040 1411 aa16.51■□□□□ 0.23
PACS1-204ENST00000525798 CENPJQ9HC77 1338 aaPredicted RBP16.5■□□□□ 0.23
PACS1-204ENST00000525798 EIF3AQ14152 1382 aaKnown RBP16.49■□□□□ 0.23
PACS1-204ENST00000525798 MINK1Q8N4C8 1332 aaPredicted RBP16.48■□□□□ 0.23
PACS1-204ENST00000525798 TESK2Q96S53 571 aa16.48■□□□□ 0.23
PACS1-204ENST00000525798 FAM135BQ49AJ0 1406 aa16.47■□□□□ 0.23
PACS1-204ENST00000525798 PTCH1Q13635 1447 aa16.46■□□□□ 0.23
PACS1-204ENST00000525798 DLC1Q96QB1 1528 aa16.46■□□□□ 0.23
PACS1-204ENST00000525798 C14orf37Q86TY3 774 aa16.45■□□□□ 0.22
PACS1-204ENST00000525798 TMEM94Q12767 1356 aa16.45■□□□□ 0.22
PACS1-204ENST00000525798 C11orf95C9JLR9 678 aaPredicted RBP16.44■□□□□ 0.22
PACS1-204ENST00000525798 XRN1Q8IZH2 1706 aaKnown RBP16.44■□□□□ 0.22
PACS1-204ENST00000525798 NWD1Q149M9 1564 aa16.43■□□□□ 0.22
PACS1-204ENST00000525798 CPS1P31327 1500 aa16.42■□□□□ 0.22
PACS1-204ENST00000525798 NKTRP30414 1462 aaKnown RBP16.42■□□□□ 0.22
PACS1-204ENST00000525798 LRRC7Q96NW7 1537 aa16.41■□□□□ 0.22
PACS1-204ENST00000525798 CHD2O14647 1828 aaKnown RBP16.41■□□□□ 0.22
PACS1-204ENST00000525798 CDK19Q9BWU1 502 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms