RNA–Protein interactions for RNA: ENST00000525653.1

HHLA3-206, Transcript of HERV-H LTR-associating 3, humanhuman

TSL 3

Gene HHLA3, Length 689 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3-206ENST00000525653 ROCK1Q13464 1354 aa13.71□□□□□ -0.22
HHLA3-206ENST00000525653 XIRP1Q702N8 1843 aaKnown RBP13.69□□□□□ -0.22
HHLA3-206ENST00000525653 MED1Q15648 1581 aaPredicted RBP13.68□□□□□ -0.22
HHLA3-206ENST00000525653 HDGFP51858 240 aaKnown RBP13.68□□□□□ -0.22
HHLA3-206ENST00000525653 MYO5BQ9ULV0 1848 aa13.67□□□□□ -0.22
HHLA3-206ENST00000525653 IQGAP3Q86VI3 1631 aa13.66□□□□□ -0.22
HHLA3-206ENST00000525653 NKTRP30414 1462 aaKnown RBP13.66□□□□□ -0.22
HHLA3-206ENST00000525653 KCNA6P17658 529 aa13.65□□□□□ -0.22
HHLA3-206ENST00000525653 NWD1Q149M9 1564 aa13.65□□□□□ -0.22
HHLA3-206ENST00000525653 E9PCH4 1651 aa13.64□□□□□ -0.23
HHLA3-206ENST00000525653 TMEM131LA2VDJ0 1609 aa13.64□□□□□ -0.23
HHLA3-206ENST00000525653 ZFYVE9O95405 1425 aa13.63□□□□□ -0.23
HHLA3-206ENST00000525653 CHD2O14647 1828 aaKnown RBP13.62□□□□□ -0.23
HHLA3-206ENST00000525653 PLEKHG1Q9ULL1 1385 aa13.62□□□□□ -0.23
HHLA3-206ENST00000525653 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.62□□□□□ -0.23
HHLA3-206ENST00000525653 FAM135BQ49AJ0 1406 aa13.62□□□□□ -0.23
HHLA3-206ENST00000525653 TMEM94Q12767 1356 aa13.61□□□□□ -0.23
HHLA3-206ENST00000525653 RIMS2Q9UQ26 1411 aa13.61□□□□□ -0.23
HHLA3-206ENST00000525653 PPP1R15AO75807 674 aaPredicted RBP13.6□□□□□ -0.23
HHLA3-206ENST00000525653 DIP2AQ14689 1571 aa13.6□□□□□ -0.23
HHLA3-206ENST00000525653 PROSER2Q86WR7 435 aaPredicted RBP13.6□□□□□ -0.23
HHLA3-206ENST00000525653 BCANQ96GW7 911 aa13.59□□□□□ -0.23
HHLA3-206ENST00000525653 SLC26A8Q96RN1 970 aa13.59□□□□□ -0.23
HHLA3-206ENST00000525653 NCOA3Q9Y6Q9 1424 aa13.58□□□□□ -0.24
HHLA3-206ENST00000525653 NUP155O75694 1391 aa13.58□□□□□ -0.24
HHLA3-206ENST00000525653 MSH6P52701 1360 aa13.58□□□□□ -0.24
HHLA3-206ENST00000525653 PIK3R4Q99570 1358 aa13.58□□□□□ -0.24
HHLA3-206ENST00000525653 TBX22Q9Y458 520 aa13.57□□□□□ -0.24
HHLA3-206ENST00000525653 SPHKAPQ2M3C7 1700 aa13.56□□□□□ -0.24
HHLA3-206ENST00000525653 ROBO1Q9Y6N7 1651 aa13.56□□□□□ -0.24
HHLA3-206ENST00000525653 CHGAP10645 457 aaKnown RBP13.54□□□□□ -0.24
HHLA3-206ENST00000525653 RRBP1Q9P2E9 1410 aaKnown RBP13.53□□□□□ -0.24
HHLA3-206ENST00000525653 TRPM2O94759 1503 aa13.53□□□□□ -0.24
HHLA3-206ENST00000525653 ITGAEP38570 1179 aa13.52□□□□□ -0.25
HHLA3-206ENST00000525653 ADAMTS13Q76LX8 1427 aa13.52□□□□□ -0.25
HHLA3-206ENST00000525653 CNKSR2Q8WXI2 1034 aa13.51□□□□□ -0.25
HHLA3-206ENST00000525653 KIF1BO60333 1816 aa13.5□□□□□ -0.25
HHLA3-206ENST00000525653 PHLPP1O60346 1717 aa13.5□□□□□ -0.25
HHLA3-206ENST00000525653 SLAIN2Q9P270 581 aa13.49□□□□□ -0.25
HHLA3-206ENST00000525653 SETBP1Q9Y6X0 1596 aa13.49□□□□□ -0.25
HHLA3-206ENST00000525653 CADPS2Q86UW7 1296 aa13.48□□□□□ -0.25
HHLA3-206ENST00000525653 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.47□□□□□ -0.25
HHLA3-206ENST00000525653 C19orf44Q9H6X5 657 aa13.47□□□□□ -0.25
HHLA3-206ENST00000525653 DCCP43146 1447 aa13.47□□□□□ -0.25
HHLA3-206ENST00000525653 C14orf37Q86TY3 774 aa13.46□□□□□ -0.25
HHLA3-206ENST00000525653 RBM33Q96EV2 1170 aaKnown RBP13.46□□□□□ -0.25
HHLA3-206ENST00000525653 XRN1Q8IZH2 1706 aaKnown RBP13.46□□□□□ -0.25
HHLA3-206ENST00000525653 NAIPQ13075 1403 aa13.46□□□□□ -0.26
HHLA3-206ENST00000525653 NRXN3Q9Y4C0 1643 aa13.46□□□□□ -0.26
HHLA3-206ENST00000525653 JCADQ9P266 1359 aa13.45□□□□□ -0.26
HHLA3-206ENST00000525653 ATF3P18847 181 aa13.45□□□□□ -0.26
HHLA3-206ENST00000525653 CLTCL1P53675 1640 aa13.44□□□□□ -0.26
HHLA3-206ENST00000525653 COL16A1Q07092 1604 aaPredicted RBP13.44□□□□□ -0.26
HHLA3-206ENST00000525653 AHDC1Q5TGY3 1603 aaPredicted RBP13.44□□□□□ -0.26
HHLA3-206ENST00000525653 NUTM2DQ5VT03 806 aaPredicted RBP13.44□□□□□ -0.26
HHLA3-206ENST00000525653 PPARGC1BQ86YN6 1023 aaKnown RBP13.44□□□□□ -0.26
HHLA3-206ENST00000525653 HFM1A2PYH4 1435 aa13.44□□□□□ -0.26
HHLA3-206ENST00000525653 ZNF326Q5BKZ1 582 aaKnown RBP13.43□□□□□ -0.26
HHLA3-206ENST00000525653 AMOTL2Q9Y2J4 779 aa13.43□□□□□ -0.26
HHLA3-206ENST00000525653 NEXMIFQ5QGS0 1516 aa13.43□□□□□ -0.26
HHLA3-206ENST00000525653 PTPRUQ92729 1446 aa13.41□□□□□ -0.26
HHLA3-206ENST00000525653 SHPRHQ149N8 1683 aa13.4□□□□□ -0.26
HHLA3-206ENST00000525653 SPATA31A6Q5VVP1 1343 aa13.4□□□□□ -0.26
HHLA3-206ENST00000525653 HOXD11P31277 338 aaPredicted RBP13.4□□□□□ -0.26
HHLA3-206ENST00000525653 RGS17Q9UGC6 210 aaPredicted RBP13.4□□□□□ -0.26
HHLA3-206ENST00000525653 RPGRIP1LQ68CZ1 1315 aa13.39□□□□□ -0.27
HHLA3-206ENST00000525653 VGFO15240 615 aaPredicted RBP13.38□□□□□ -0.27
HHLA3-206ENST00000525653 ADGRL3Q9HAR2 1447 aa13.38□□□□□ -0.27
HHLA3-206ENST00000525653 ACIN1Q9UKV3 1341 aaKnown RBP13.38□□□□□ -0.27
HHLA3-206ENST00000525653 TRIM52Q96A61 297 aa13.37□□□□□ -0.27
HHLA3-206ENST00000525653 PPLO60437 1756 aa13.37□□□□□ -0.27
HHLA3-206ENST00000525653 METP08581 1390 aa13.36□□□□□ -0.27
HHLA3-206ENST00000525653 NHSL1Q5SYE7 1610 aa13.36□□□□□ -0.27
HHLA3-206ENST00000525653 SLC4A1APQ9BWU0 796 aaKnown RBP13.36□□□□□ -0.27
HHLA3-206ENST00000525653 PTCH1Q13635 1447 aa13.36□□□□□ -0.27
HHLA3-206ENST00000525653 PRAG1Q86YV5 1406 aa13.36□□□□□ -0.27
HHLA3-206ENST00000525653 SETD1AO15047 1707 aaKnown RBP13.36□□□□□ -0.27
HHLA3-206ENST00000525653 ASXL1Q8IXJ9 1541 aa13.35□□□□□ -0.27
HHLA3-206ENST00000525653 NCBP3Q53F19 620 aaKnown RBP13.35□□□□□ -0.27
HHLA3-206ENST00000525653 RNF216Q9NWF9 866 aaPredicted RBP13.35□□□□□ -0.27
HHLA3-206ENST00000525653 MST1RQ04912 1400 aa13.35□□□□□ -0.27
HHLA3-206ENST00000525653 NALCNQ8IZF0 1738 aa13.34□□□□□ -0.27
HHLA3-206ENST00000525653 BRINP3Q76B58 766 aa13.34□□□□□ -0.27
HHLA3-206ENST00000525653 SETD5Q9C0A6 1442 aa13.33□□□□□ -0.28
HHLA3-206ENST00000525653 POTEAQ6S8J7 498 aa13.33□□□□□ -0.28
HHLA3-206ENST00000525653 ZNF772Q68DY9 489 aaPredicted RBP13.32□□□□□ -0.28
HHLA3-206ENST00000525653 MEX3CQ5U5Q3 659 aaKnown RBP13.31□□□□□ -0.28
HHLA3-206ENST00000525653 LRP6O75581 1613 aa13.31□□□□□ -0.28
HHLA3-206ENST00000525653 LAMC1P11047 1609 aa13.31□□□□□ -0.28
HHLA3-206ENST00000525653 CCDC144AA2RUR9 1427 aa13.3□□□□□ -0.28
HHLA3-206ENST00000525653 LRRC59Q96AG4 307 aaKnown RBP13.3□□□□□ -0.28
HHLA3-206ENST00000525653 IFT172Q9UG01 1749 aa13.28□□□□□ -0.28
HHLA3-206ENST00000525653 ANKRD30BQ9BXX2 1392 aa13.28□□□□□ -0.28
HHLA3-206ENST00000525653 C1orf167Q5SNV9 1468 aa13.28□□□□□ -0.28
HHLA3-206ENST00000525653 CDC42BPGQ6DT37 1551 aa13.26□□□□□ -0.29
HHLA3-206ENST00000525653 ROBO2Q9HCK4 1378 aa13.26□□□□□ -0.29
HHLA3-206ENST00000525653 KNDC1Q76NI1 1749 aa13.25□□□□□ -0.29
HHLA3-206ENST00000525653 CDK12Q9NYV4 1490 aaPredicted RBP13.25□□□□□ -0.29
HHLA3-206ENST00000525653 SPATA31E1Q6ZUB1 1445 aa13.25□□□□□ -0.29
HHLA3-206ENST00000525653 TECPR2O15040 1411 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms