RNA–Protein interactions for RNA: ENST00000525568.1

PITPNM1-205, Transcript of phosphatidylinositol transfer protein membrane associated 1, humanhuman

TSL 3

Gene PITPNM1, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM1-205ENST00000525568 HDGFP51858 240 aaKnown RBP28.72■■■□□ 2.19
PITPNM1-205ENST00000525568 PROSER2Q86WR7 435 aaPredicted RBP28.71■■■□□ 2.19
PITPNM1-205ENST00000525568 TMEM94Q12767 1356 aa28.71■■■□□ 2.19
PITPNM1-205ENST00000525568 CHGAP10645 457 aaKnown RBP28.68■■■□□ 2.18
PITPNM1-205ENST00000525568 ITGAEP38570 1179 aa28.66■■■□□ 2.18
PITPNM1-205ENST00000525568 ROCK1Q13464 1354 aa28.65■■■□□ 2.18
PITPNM1-205ENST00000525568 RIMS2Q9UQ26 1411 aa28.65■■■□□ 2.18
PITPNM1-205ENST00000525568 NKTRP30414 1462 aaKnown RBP28.65■■■□□ 2.18
PITPNM1-205ENST00000525568 E9PCH4 1651 aa28.64■■■□□ 2.18
PITPNM1-205ENST00000525568 TMEM131LA2VDJ0 1609 aa28.64■■■□□ 2.18
PITPNM1-205ENST00000525568 NWD1Q149M9 1564 aa28.63■■■□□ 2.17
PITPNM1-205ENST00000525568 IQGAP3Q86VI3 1631 aa28.62■■■□□ 2.17
PITPNM1-205ENST00000525568 RBM33Q96EV2 1170 aaKnown RBP28.62■■■□□ 2.17
PITPNM1-205ENST00000525568 PLEKHG1Q9ULL1 1385 aa28.62■■■□□ 2.17
PITPNM1-205ENST00000525568 ZFYVE9O95405 1425 aa28.61■■■□□ 2.17
PITPNM1-205ENST00000525568 FAM135BQ49AJ0 1406 aa28.6■■■□□ 2.17
PITPNM1-205ENST00000525568 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.6■■■□□ 2.17
PITPNM1-205ENST00000525568 MSH6P52701 1360 aa28.6■■■□□ 2.17
PITPNM1-205ENST00000525568 ROBO1Q9Y6N7 1651 aa28.59■■■□□ 2.17
PITPNM1-205ENST00000525568 CHD2O14647 1828 aaKnown RBP28.59■■■□□ 2.17
PITPNM1-205ENST00000525568 NUP155O75694 1391 aa28.58■■■□□ 2.17
PITPNM1-205ENST00000525568 PPARGC1BQ86YN6 1023 aaKnown RBP28.57■■■□□ 2.16
PITPNM1-205ENST00000525568 NUTM2DQ5VT03 806 aaPredicted RBP28.52■■■□□ 2.16
PITPNM1-205ENST00000525568 C14orf37Q86TY3 774 aa28.52■■■□□ 2.16
PITPNM1-205ENST00000525568 TBX22Q9Y458 520 aa28.5■■■□□ 2.15
PITPNM1-205ENST00000525568 DIP2AQ14689 1571 aa28.48■■■□□ 2.15
PITPNM1-205ENST00000525568 SLAIN2Q9P270 581 aa28.47■■■□□ 2.15
PITPNM1-205ENST00000525568 PHLPP1O60346 1717 aa28.46■■■□□ 2.15
PITPNM1-205ENST00000525568 SPHKAPQ2M3C7 1700 aa28.46■■■□□ 2.15
PITPNM1-205ENST00000525568 TRPM2O94759 1503 aa28.42■■■□□ 2.14
PITPNM1-205ENST00000525568 ADAMTS13Q76LX8 1427 aa28.42■■■□□ 2.14
PITPNM1-205ENST00000525568 PIK3R4Q99570 1358 aa28.41■■■□□ 2.14
PITPNM1-205ENST00000525568 NCOA3Q9Y6Q9 1424 aa28.41■■■□□ 2.14
PITPNM1-205ENST00000525568 ZNF326Q5BKZ1 582 aaKnown RBP28.4■■■□□ 2.14
PITPNM1-205ENST00000525568 ATF3P18847 181 aa28.37■■■□□ 2.13
PITPNM1-205ENST00000525568 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.36■■■□□ 2.13
PITPNM1-205ENST00000525568 CADPS2Q86UW7 1296 aa28.36■■■□□ 2.13
PITPNM1-205ENST00000525568 RGS17Q9UGC6 210 aaPredicted RBP28.36■■■□□ 2.13
PITPNM1-205ENST00000525568 C19orf44Q9H6X5 657 aa28.34■■■□□ 2.13
PITPNM1-205ENST00000525568 AMOTL2Q9Y2J4 779 aa28.34■■■□□ 2.13
PITPNM1-205ENST00000525568 JCADQ9P266 1359 aa28.34■■■□□ 2.13
PITPNM1-205ENST00000525568 KIF1BO60333 1816 aa28.3■■■□□ 2.12
PITPNM1-205ENST00000525568 RRBP1Q9P2E9 1410 aaKnown RBP28.28■■■□□ 2.12
PITPNM1-205ENST00000525568 COL16A1Q07092 1604 aaPredicted RBP28.28■■■□□ 2.12
PITPNM1-205ENST00000525568 SETBP1Q9Y6X0 1596 aa28.28■■■□□ 2.12
PITPNM1-205ENST00000525568 NRXN3Q9Y4C0 1643 aa28.27■■■□□ 2.12
PITPNM1-205ENST00000525568 PTPRUQ92729 1446 aa28.26■■■□□ 2.12
PITPNM1-205ENST00000525568 CLTCL1P53675 1640 aa28.26■■■□□ 2.11
PITPNM1-205ENST00000525568 XRN1Q8IZH2 1706 aaKnown RBP28.24■■■□□ 2.11
PITPNM1-205ENST00000525568 POTEAQ6S8J7 498 aa28.24■■■□□ 2.11
PITPNM1-205ENST00000525568 TRIM52Q96A61 297 aa28.24■■■□□ 2.11
PITPNM1-205ENST00000525568 MEX3CQ5U5Q3 659 aaKnown RBP28.23■■■□□ 2.11
PITPNM1-205ENST00000525568 NAIPQ13075 1403 aa28.23■■■□□ 2.11
PITPNM1-205ENST00000525568 AHDC1Q5TGY3 1603 aaPredicted RBP28.21■■■□□ 2.11
PITPNM1-205ENST00000525568 DCCP43146 1447 aa28.2■■■□□ 2.11
PITPNM1-205ENST00000525568 SPATA31A6Q5VVP1 1343 aa28.19■■■□□ 2.1
PITPNM1-205ENST00000525568 NEXMIFQ5QGS0 1516 aa28.19■■■□□ 2.1
PITPNM1-205ENST00000525568 SHPRHQ149N8 1683 aa28.17■■■□□ 2.1
PITPNM1-205ENST00000525568 METP08581 1390 aa28.16■■■□□ 2.1
PITPNM1-205ENST00000525568 BRINP3Q76B58 766 aa28.16■■■□□ 2.1
PITPNM1-205ENST00000525568 SLC4A1APQ9BWU0 796 aaKnown RBP28.13■■■□□ 2.09
PITPNM1-205ENST00000525568 HFM1A2PYH4 1435 aa28.12■■■□□ 2.09
PITPNM1-205ENST00000525568 ASXL1Q8IXJ9 1541 aa28.12■■■□□ 2.09
PITPNM1-205ENST00000525568 LRP6O75581 1613 aa28.1■■■□□ 2.09
PITPNM1-205ENST00000525568 VGFO15240 615 aaPredicted RBP28.1■■■□□ 2.09
PITPNM1-205ENST00000525568 ADGRL3Q9HAR2 1447 aa28.09■■■□□ 2.09
PITPNM1-205ENST00000525568 SETD1AO15047 1707 aaKnown RBP28.09■■■□□ 2.09
PITPNM1-205ENST00000525568 NALCNQ8IZF0 1738 aa28.09■■■□□ 2.09
PITPNM1-205ENST00000525568 MST1RQ04912 1400 aa28.09■■■□□ 2.09
PITPNM1-205ENST00000525568 ZNF772Q68DY9 489 aaPredicted RBP28.08■■■□□ 2.09
PITPNM1-205ENST00000525568 NUTM2BA6NNL0 878 aaPredicted RBP28.07■■■□□ 2.08
PITPNM1-205ENST00000525568 NUTM2EB1AL46 878 aaPredicted RBP28.07■■■□□ 2.08
PITPNM1-205ENST00000525568 NUTM2AQ8IVF1 878 aaPredicted RBP28.07■■■□□ 2.08
PITPNM1-205ENST00000525568 NHSL1Q5SYE7 1610 aa28.07■■■□□ 2.08
PITPNM1-205ENST00000525568 RPGRIP1LQ68CZ1 1315 aa28.04■■■□□ 2.08
PITPNM1-205ENST00000525568 PPLO60437 1756 aa28.03■■■□□ 2.08
PITPNM1-205ENST00000525568 LRRC59Q96AG4 307 aaKnown RBP28.02■■■□□ 2.08
PITPNM1-205ENST00000525568 SETD5Q9C0A6 1442 aa28.01■■■□□ 2.07
PITPNM1-205ENST00000525568 PTCH1Q13635 1447 aa28■■■□□ 2.07
PITPNM1-205ENST00000525568 DDX17Q92841 729 aaKnown RBP27.95■■■□□ 2.06
PITPNM1-205ENST00000525568 FOXD1Q16676 465 aa27.94■■■□□ 2.06
PITPNM1-205ENST00000525568 ROBO2Q9HCK4 1378 aa27.94■■■□□ 2.06
PITPNM1-205ENST00000525568 C1orf167Q5SNV9 1468 aa27.94■■■□□ 2.06
PITPNM1-205ENST00000525568 CCDC144AA2RUR9 1427 aa27.93■■■□□ 2.06
PITPNM1-205ENST00000525568 RXRBP28702 533 aa27.93■■■□□ 2.06
PITPNM1-205ENST00000525568 AFF2P51816 1311 aa27.92■■■□□ 2.06
PITPNM1-205ENST00000525568 PNPLA6Q8IY17 1366 aa27.89■■■□□ 2.06
PITPNM1-205ENST00000525568 RGL3Q3MIN7 710 aa27.89■■■□□ 2.06
PITPNM1-205ENST00000525568 C8orf37Q96NL8 207 aa27.89■■■□□ 2.06
PITPNM1-205ENST00000525568 PRAG1Q86YV5 1406 aa27.87■■■□□ 2.05
PITPNM1-205ENST00000525568 ORAI2Q96SN7 254 aa27.86■■■□□ 2.05
PITPNM1-205ENST00000525568 MPHOSPH9Q99550 1183 aa27.85■■■□□ 2.05
PITPNM1-205ENST00000525568 LAMC1P11047 1609 aa27.84■■■□□ 2.05
PITPNM1-205ENST00000525568 IFT172Q9UG01 1749 aa27.82■■■□□ 2.04
PITPNM1-205ENST00000525568 ADAMTS2O95450 1211 aa27.82■■■□□ 2.04
PITPNM1-205ENST00000525568 ADGRF5Q8IZF2 1346 aa27.82■■■□□ 2.04
PITPNM1-205ENST00000525568 ANKRD30BQ9BXX2 1392 aa27.82■■■□□ 2.04
PITPNM1-205ENST00000525568 NGLY1Q96IV0 654 aa27.81■■■□□ 2.04
PITPNM1-205ENST00000525568 STK26Q9P289 416 aa27.81■■■□□ 2.04
PITPNM1-205ENST00000525568 SOS2Q07890 1332 aaPredicted RBP27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms