RNA–Protein interactions for RNA: ENST00000525468.1

SDHD-210, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 3

Gene SDHD, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-210ENST00000525468 STAG3Q9UJ98 1225 aa13.22□□□□□ -0.29
SDHD-210ENST00000525468 NWD1Q149M9 1564 aa13.22□□□□□ -0.29
SDHD-210ENST00000525468 ITGAEP38570 1179 aa13.21□□□□□ -0.29
SDHD-210ENST00000525468 RBM33Q96EV2 1170 aaKnown RBP13.21□□□□□ -0.29
SDHD-210ENST00000525468 SENP3Q9H4L4 574 aaPredicted RBP13.21□□□□□ -0.29
SDHD-210ENST00000525468 TMEM94Q12767 1356 aa13.2□□□□□ -0.3
SDHD-210ENST00000525468 SOCS7O14512 581 aa13.19□□□□□ -0.3
SDHD-210ENST00000525468 KCNA6P17658 529 aa13.19□□□□□ -0.3
SDHD-210ENST00000525468 RRBP1Q9P2E9 1410 aaKnown RBP13.19□□□□□ -0.3
SDHD-210ENST00000525468 RIMS2Q9UQ26 1411 aa13.19□□□□□ -0.3
SDHD-210ENST00000525468 NUP155O75694 1391 aa13.19□□□□□ -0.3
SDHD-210ENST00000525468 PLEKHG1Q9ULL1 1385 aa13.18□□□□□ -0.3
SDHD-210ENST00000525468 SPHKAPQ2M3C7 1700 aa13.17□□□□□ -0.3
SDHD-210ENST00000525468 ADAMTS13Q76LX8 1427 aa13.17□□□□□ -0.3
SDHD-210ENST00000525468 NUTM2DQ5VT03 806 aaPredicted RBP13.16□□□□□ -0.3
SDHD-210ENST00000525468 NRXN3Q9Y4C0 1643 aa13.15□□□□□ -0.3
SDHD-210ENST00000525468 NKTRP30414 1462 aaKnown RBP13.15□□□□□ -0.3
SDHD-210ENST00000525468 ROBO1Q9Y6N7 1651 aa13.15□□□□□ -0.31
SDHD-210ENST00000525468 NAIPQ13075 1403 aa13.14□□□□□ -0.31
SDHD-210ENST00000525468 FAM135BQ49AJ0 1406 aa13.13□□□□□ -0.31
SDHD-210ENST00000525468 PROSER2Q86WR7 435 aaPredicted RBP13.13□□□□□ -0.31
SDHD-210ENST00000525468 TBX22Q9Y458 520 aa13.12□□□□□ -0.31
SDHD-210ENST00000525468 CLTCL1P53675 1640 aa13.12□□□□□ -0.31
SDHD-210ENST00000525468 PTPRUQ92729 1446 aa13.12□□□□□ -0.31
SDHD-210ENST00000525468 CHGAP10645 457 aaKnown RBP13.11□□□□□ -0.31
SDHD-210ENST00000525468 RGS17Q9UGC6 210 aaPredicted RBP13.1□□□□□ -0.31
SDHD-210ENST00000525468 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.1□□□□□ -0.31
SDHD-210ENST00000525468 PPP1R15AO75807 674 aaPredicted RBP13.09□□□□□ -0.31
SDHD-210ENST00000525468 DIP2AQ14689 1571 aa13.09□□□□□ -0.31
SDHD-210ENST00000525468 BCANQ96GW7 911 aa13.09□□□□□ -0.31
SDHD-210ENST00000525468 TRPM2O94759 1503 aa13.08□□□□□ -0.32
SDHD-210ENST00000525468 XRN1Q8IZH2 1706 aaKnown RBP13.08□□□□□ -0.32
SDHD-210ENST00000525468 SETBP1Q9Y6X0 1596 aa13.07□□□□□ -0.32
SDHD-210ENST00000525468 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.07□□□□□ -0.32
SDHD-210ENST00000525468 NEXMIFQ5QGS0 1516 aa13.07□□□□□ -0.32
SDHD-210ENST00000525468 KIF1BO60333 1816 aa13.06□□□□□ -0.32
SDHD-210ENST00000525468 HFM1A2PYH4 1435 aa13.06□□□□□ -0.32
SDHD-210ENST00000525468 SLAIN2Q9P270 581 aa13.06□□□□□ -0.32
SDHD-210ENST00000525468 MSH6P52701 1360 aa13.06□□□□□ -0.32
SDHD-210ENST00000525468 SETD1AO15047 1707 aaKnown RBP13.05□□□□□ -0.32
SDHD-210ENST00000525468 PHLPP1O60346 1717 aa13.05□□□□□ -0.32
SDHD-210ENST00000525468 HDGFP51858 240 aaKnown RBP13.05□□□□□ -0.32
SDHD-210ENST00000525468 COL16A1Q07092 1604 aaPredicted RBP13.05□□□□□ -0.32
SDHD-210ENST00000525468 PIK3R4Q99570 1358 aa13.05□□□□□ -0.32
SDHD-210ENST00000525468 METP08581 1390 aa13.04□□□□□ -0.32
SDHD-210ENST00000525468 AMOTL2Q9Y2J4 779 aa13.03□□□□□ -0.32
SDHD-210ENST00000525468 NCOA3Q9Y6Q9 1424 aa13.03□□□□□ -0.32
SDHD-210ENST00000525468 PPLO60437 1756 aa13.01□□□□□ -0.33
SDHD-210ENST00000525468 NALCNQ8IZF0 1738 aa13□□□□□ -0.33
SDHD-210ENST00000525468 FOXD1Q16676 465 aa12.99□□□□□ -0.33
SDHD-210ENST00000525468 ZNF326Q5BKZ1 582 aaKnown RBP12.99□□□□□ -0.33
SDHD-210ENST00000525468 PHF23Q9BUL5 403 aaPredicted RBP12.99□□□□□ -0.33
SDHD-210ENST00000525468 C19orf44Q9H6X5 657 aa12.99□□□□□ -0.33
SDHD-210ENST00000525468 AHDC1Q5TGY3 1603 aaPredicted RBP12.99□□□□□ -0.33
SDHD-210ENST00000525468 POTEAQ6S8J7 498 aa12.98□□□□□ -0.33
SDHD-210ENST00000525468 TRIM52Q96A61 297 aa12.97□□□□□ -0.33
SDHD-210ENST00000525468 LRP6O75581 1613 aa12.97□□□□□ -0.33
SDHD-210ENST00000525468 SLC4A1APQ9BWU0 796 aaKnown RBP12.96□□□□□ -0.33
SDHD-210ENST00000525468 MST1RQ04912 1400 aa12.96□□□□□ -0.34
SDHD-210ENST00000525468 NHSL1Q5SYE7 1610 aa12.95□□□□□ -0.34
SDHD-210ENST00000525468 BRINP3Q76B58 766 aa12.95□□□□□ -0.34
SDHD-210ENST00000525468 C14orf37Q86TY3 774 aa12.95□□□□□ -0.34
SDHD-210ENST00000525468 CADPS2Q86UW7 1296 aa12.95□□□□□ -0.34
SDHD-210ENST00000525468 IFT172Q9UG01 1749 aa12.95□□□□□ -0.34
SDHD-210ENST00000525468 SHPRHQ149N8 1683 aa12.95□□□□□ -0.34
SDHD-210ENST00000525468 DCCP43146 1447 aa12.95□□□□□ -0.34
SDHD-210ENST00000525468 JCADQ9P266 1359 aa12.94□□□□□ -0.34
SDHD-210ENST00000525468 ATF3P18847 181 aa12.94□□□□□ -0.34
SDHD-210ENST00000525468 ASXL1Q8IXJ9 1541 aa12.93□□□□□ -0.34
SDHD-210ENST00000525468 SPATA31E1Q6ZUB1 1445 aa12.93□□□□□ -0.34
SDHD-210ENST00000525468 ADGRL3Q9HAR2 1447 aa12.93□□□□□ -0.34
SDHD-210ENST00000525468 ROBO2Q9HCK4 1378 aa12.93□□□□□ -0.34
SDHD-210ENST00000525468 PRAG1Q86YV5 1406 aa12.92□□□□□ -0.34
SDHD-210ENST00000525468 DDX17Q92841 729 aaKnown RBP12.92□□□□□ -0.34
SDHD-210ENST00000525468 EP400Q96L91 3159 aa12.9□□□□□ -0.34
SDHD-210ENST00000525468 PTCH1Q13635 1447 aa12.9□□□□□ -0.34
SDHD-210ENST00000525468 SRCAPQ6ZRS2 3230 aa12.9□□□□□ -0.34
SDHD-210ENST00000525468 MPHOSPH9Q99550 1183 aa12.9□□□□□ -0.34
SDHD-210ENST00000525468 RPGRIP1LQ68CZ1 1315 aa12.89□□□□□ -0.35
SDHD-210ENST00000525468 ADGRF5Q8IZF2 1346 aa12.89□□□□□ -0.35
SDHD-210ENST00000525468 LAMC1P11047 1609 aa12.89□□□□□ -0.35
SDHD-210ENST00000525468 VGFO15240 615 aaPredicted RBP12.89□□□□□ -0.35
SDHD-210ENST00000525468 SETD5Q9C0A6 1442 aa12.88□□□□□ -0.35
SDHD-210ENST00000525468 C1orf167Q5SNV9 1468 aa12.88□□□□□ -0.35
SDHD-210ENST00000525468 SPATA31A6Q5VVP1 1343 aa12.87□□□□□ -0.35
SDHD-210ENST00000525468 RGL3Q3MIN7 710 aa12.85□□□□□ -0.35
SDHD-210ENST00000525468 ORAI2Q96SN7 254 aa12.85□□□□□ -0.35
SDHD-210ENST00000525468 CCDC144AA2RUR9 1427 aa12.85□□□□□ -0.35
SDHD-210ENST00000525468 PNPLA6Q8IY17 1366 aa12.83□□□□□ -0.36
SDHD-210ENST00000525468 KNDC1Q76NI1 1749 aa12.83□□□□□ -0.36
SDHD-210ENST00000525468 TECPR2O15040 1411 aa12.83□□□□□ -0.36
SDHD-210ENST00000525468 PIK3C2GO75747 1445 aa12.83□□□□□ -0.36
SDHD-210ENST00000525468 PLEKHH1Q9ULM0 1364 aa12.82□□□□□ -0.36
SDHD-210ENST00000525468 RGPD8O14715 1765 aaPredicted RBP12.82□□□□□ -0.36
SDHD-210ENST00000525468 TMEM132EQ6IEE7 984 aa12.82□□□□□ -0.36
SDHD-210ENST00000525468 WAPLQ7Z5K2 1190 aa12.82□□□□□ -0.36
SDHD-210ENST00000525468 RAB3GAP2Q9H2M9 1393 aa12.81□□□□□ -0.36
SDHD-210ENST00000525468 CDC42BPGQ6DT37 1551 aa12.81□□□□□ -0.36
SDHD-210ENST00000525468 NRXN1Q9ULB1 1477 aa12.81□□□□□ -0.36
SDHD-210ENST00000525468 NUTM2BA6NNL0 878 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms