RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 VGFO15240 615 aaPredicted RBP18.07■□□□□ 0.48
CCS-202ENST00000525435 CLTCL1P53675 1640 aa18.07■□□□□ 0.48
CCS-202ENST00000525435 NPHP4O75161 1426 aaPredicted RBP18.06■□□□□ 0.48
CCS-202ENST00000525435 PPP1R15AO75807 674 aaPredicted RBP18.06■□□□□ 0.48
CCS-202ENST00000525435 SPATA31E1Q6ZUB1 1445 aa18.06■□□□□ 0.48
CCS-202ENST00000525435 DHX57Q6P158 1386 aaKnown RBP18.05■□□□□ 0.48
CCS-202ENST00000525435 STAC3Q96MF2 364 aa18.05■□□□□ 0.48
CCS-202ENST00000525435 NEURL4Q96JN8 1562 aa18.04■□□□□ 0.48
CCS-202ENST00000525435 PLEKHG1Q9ULL1 1385 aa18.04■□□□□ 0.48
CCS-202ENST00000525435 RGL3Q3MIN7 710 aa18.03■□□□□ 0.48
CCS-202ENST00000525435 ILDR1Q86SU0 546 aaPredicted RBP18.02■□□□□ 0.48
CCS-202ENST00000525435 TBX22Q9Y458 520 aa18.01■□□□□ 0.47
CCS-202ENST00000525435 BCANQ96GW7 911 aa18■□□□□ 0.47
CCS-202ENST00000525435 KIF1BO60333 1816 aa18■□□□□ 0.47
CCS-202ENST00000525435 NUTM2DQ5VT03 806 aaPredicted RBP17.98■□□□□ 0.47
CCS-202ENST00000525435 POLR1AO95602 1720 aaPredicted RBP17.97■□□□□ 0.47
CCS-202ENST00000525435 SLC26A8Q96RN1 970 aa17.96■□□□□ 0.47
CCS-202ENST00000525435 CLSPNQ9HAW4 1339 aa17.96■□□□□ 0.46
CCS-202ENST00000525435 NEXMIFQ5QGS0 1516 aa17.95■□□□□ 0.46
CCS-202ENST00000525435 FBXO41Q8TF61 875 aa17.95■□□□□ 0.46
CCS-202ENST00000525435 IQGAP1P46940 1657 aa17.94■□□□□ 0.46
CCS-202ENST00000525435 MYO5BQ9ULV0 1848 aa17.94■□□□□ 0.46
CCS-202ENST00000525435 PIK3R4Q99570 1358 aa17.93■□□□□ 0.46
CCS-202ENST00000525435 KCNA6P17658 529 aa17.93■□□□□ 0.46
CCS-202ENST00000525435 ADAMTS13Q76LX8 1427 aa17.92■□□□□ 0.46
CCS-202ENST00000525435 DCAF11Q8TEB1 546 aa17.92■□□□□ 0.46
CCS-202ENST00000525435 SIN3AQ96ST3 1273 aa17.92■□□□□ 0.46
CCS-202ENST00000525435 ZNF335Q9H4Z2 1342 aaPredicted RBP17.92■□□□□ 0.46
CCS-202ENST00000525435 ADGRF5Q8IZF2 1346 aa17.91■□□□□ 0.46
CCS-202ENST00000525435 NEUROD1Q13562 356 aa17.9■□□□□ 0.46
CCS-202ENST00000525435 CERKQ8TCT0 537 aa17.9■□□□□ 0.46
CCS-202ENST00000525435 SETBP1Q9Y6X0 1596 aa17.89■□□□□ 0.45
CCS-202ENST00000525435 C14orf93Q9H972 538 aaKnown RBP17.88■□□□□ 0.45
CCS-202ENST00000525435 MYOM2P54296 1465 aa17.88■□□□□ 0.45
CCS-202ENST00000525435 DIP2AQ14689 1571 aa17.87■□□□□ 0.45
CCS-202ENST00000525435 L3MBTL2Q969R5 705 aa17.87■□□□□ 0.45
CCS-202ENST00000525435 KDM2AQ9Y2K7 1162 aa17.86■□□□□ 0.45
CCS-202ENST00000525435 NRXN1Q9ULB1 1477 aa17.86■□□□□ 0.45
CCS-202ENST00000525435 LTBP4Q8N2S1 1624 aa17.86■□□□□ 0.45
CCS-202ENST00000525435 PPLO60437 1756 aa17.85■□□□□ 0.45
CCS-202ENST00000525435 PIK3C2GO75747 1445 aa17.85■□□□□ 0.45
CCS-202ENST00000525435 CPS1P31327 1500 aa17.85■□□□□ 0.45
CCS-202ENST00000525435 SENP3Q9H4L4 574 aaPredicted RBP17.85■□□□□ 0.45
CCS-202ENST00000525435 TIMELESSQ9UNS1 1208 aa17.85■□□□□ 0.45
CCS-202ENST00000525435 CCER1Q8TC90 406 aaPredicted RBP17.84■□□□□ 0.45
CCS-202ENST00000525435 AMOTL2Q9Y2J4 779 aa17.84■□□□□ 0.45
CCS-202ENST00000525435 METP08581 1390 aa17.83■□□□□ 0.45
CCS-202ENST00000525435 ALKQ9UM73 1620 aa17.8■□□□□ 0.44
CCS-202ENST00000525435 NRXN3Q9Y4C0 1643 aa17.8■□□□□ 0.44
CCS-202ENST00000525435 CFAP70Q5T0N1 1121 aa17.8■□□□□ 0.44
CCS-202ENST00000525435 PROSER2Q86WR7 435 aaPredicted RBP17.8■□□□□ 0.44
CCS-202ENST00000525435 IQSEC2Q5JU85 1478 aa17.8■□□□□ 0.44
CCS-202ENST00000525435 TONSLQ96HA7 1378 aa17.79■□□□□ 0.44
CCS-202ENST00000525435 IFT172Q9UG01 1749 aa17.79■□□□□ 0.44
CCS-202ENST00000525435 NKTRP30414 1462 aaKnown RBP17.79■□□□□ 0.44
CCS-202ENST00000525435 NCOA3Q9Y6Q9 1424 aa17.79■□□□□ 0.44
CCS-202ENST00000525435 SIRT1Q96EB6 747 aa17.78■□□□□ 0.44
CCS-202ENST00000525435 ABCC11Q96J66 1382 aa17.78■□□□□ 0.44
CCS-202ENST00000525435 PTPRUQ92729 1446 aa17.77■□□□□ 0.44
CCS-202ENST00000525435 LRRC7Q96NW7 1537 aa17.77■□□□□ 0.43
CCS-202ENST00000525435 NWD1Q149M9 1564 aa17.76■□□□□ 0.43
CCS-202ENST00000525435 PRAG1Q86YV5 1406 aa17.76■□□□□ 0.43
CCS-202ENST00000525435 LRPPRCP42704 1394 aaKnown RBP17.76■□□□□ 0.43
CCS-202ENST00000525435 TMEM132EQ6IEE7 984 aa17.75■□□□□ 0.43
CCS-202ENST00000525435 TMEM94Q12767 1356 aa17.75■□□□□ 0.43
CCS-202ENST00000525435 CHD2O14647 1828 aaKnown RBP17.75■□□□□ 0.43
CCS-202ENST00000525435 TECPR2O15040 1411 aa17.72■□□□□ 0.43
CCS-202ENST00000525435 C19orf44Q9H6X5 657 aa17.72■□□□□ 0.43
CCS-202ENST00000525435 YTHDC2Q9H6S0 1430 aaKnown RBP17.72■□□□□ 0.43
CCS-202ENST00000525435 TOM1O60784 492 aa17.71■□□□□ 0.43
CCS-202ENST00000525435 STK26Q9P289 416 aa17.71■□□□□ 0.43
CCS-202ENST00000525435 PTCH1Q13635 1447 aa17.71■□□□□ 0.43
CCS-202ENST00000525435 STRCP1A6NGW2 1772 aa17.71■□□□□ 0.43
CCS-202ENST00000525435 LAMC1P11047 1609 aa17.7■□□□□ 0.42
CCS-202ENST00000525435 SETD1AO15047 1707 aaKnown RBP17.69■□□□□ 0.42
CCS-202ENST00000525435 FAM135BQ49AJ0 1406 aa17.69■□□□□ 0.42
CCS-202ENST00000525435 ROBO2Q9HCK4 1378 aa17.68■□□□□ 0.42
CCS-202ENST00000525435 NBPF1Q3BBV0 1214 aa17.68■□□□□ 0.42
CCS-202ENST00000525435 NBPF8Q3BBV2 869 aa17.68■□□□□ 0.42
CCS-202ENST00000525435 C14orf37Q86TY3 774 aa17.68■□□□□ 0.42
CCS-202ENST00000525435 XRN1Q8IZH2 1706 aaKnown RBP17.68■□□□□ 0.42
CCS-202ENST00000525435 MSH6P52701 1360 aa17.67■□□□□ 0.42
CCS-202ENST00000525435 ADGRB1O14514 1584 aa17.66■□□□□ 0.42
CCS-202ENST00000525435 UBAP1LF5GYI3 381 aa17.66■□□□□ 0.42
CCS-202ENST00000525435 CADPS2Q86UW7 1296 aa17.66■□□□□ 0.42
CCS-202ENST00000525435 RBM33Q96EV2 1170 aaKnown RBP17.66■□□□□ 0.42
CCS-202ENST00000525435 ASXL1Q8IXJ9 1541 aa17.66■□□□□ 0.42
CCS-202ENST00000525435 KIAA1210Q9ULL0 1709 aa17.64■□□□□ 0.41
CCS-202ENST00000525435 ATF3P18847 181 aa17.64■□□□□ 0.41
CCS-202ENST00000525435 WAPLQ7Z5K2 1190 aa17.64■□□□□ 0.41
CCS-202ENST00000525435 TRAK1Q9UPV9 953 aa17.64■□□□□ 0.41
CCS-202ENST00000525435 DLC1Q96QB1 1528 aa17.63■□□□□ 0.41
CCS-202ENST00000525435 POGKQ9P215 609 aa17.63■□□□□ 0.41
CCS-202ENST00000525435 DCCP43146 1447 aa17.63■□□□□ 0.41
CCS-202ENST00000525435 PRAM1Q96QH2 718 aa17.62■□□□□ 0.41
CCS-202ENST00000525435 ROCK2O75116 1388 aaKnown RBP17.62■□□□□ 0.41
CCS-202ENST00000525435 GPRASP1Q5JY77 1395 aa17.62■□□□□ 0.41
CCS-202ENST00000525435 SLAIN2Q9P270 581 aa17.61■□□□□ 0.41
CCS-202ENST00000525435 ADGRL3Q9HAR2 1447 aa17.61■□□□□ 0.41
CCS-202ENST00000525435 CARD11Q9BXL7 1154 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms