RNA–Protein interactions for RNA: ENST00000525375.1

GPATCH4-212, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-212ENST00000525375 ZNF335Q9H4Z2 1342 aaPredicted RBP17.68■□□□□ 0.42
GPATCH4-212ENST00000525375 STRCP1A6NGW2 1772 aa17.67■□□□□ 0.42
GPATCH4-212ENST00000525375 HRCP23327 699 aa17.67■□□□□ 0.42
GPATCH4-212ENST00000525375 DMRT2Q9Y5R5 561 aa17.66■□□□□ 0.42
GPATCH4-212ENST00000525375 NRXN3Q9Y4C0 1643 aa17.65■□□□□ 0.42
GPATCH4-212ENST00000525375 CCDC144AA2RUR9 1427 aa17.64■□□□□ 0.42
GPATCH4-212ENST00000525375 ANKRD30BQ9BXX2 1392 aa17.64■□□□□ 0.41
GPATCH4-212ENST00000525375 SPATA31E1Q6ZUB1 1445 aa17.64■□□□□ 0.41
GPATCH4-212ENST00000525375 EID1Q9Y6B2 187 aa17.62■□□□□ 0.41
GPATCH4-212ENST00000525375 IFT172Q9UG01 1749 aa17.61■□□□□ 0.41
GPATCH4-212ENST00000525375 PPLO60437 1756 aa17.61■□□□□ 0.41
GPATCH4-212ENST00000525375 PLEKHG1Q9ULL1 1385 aa17.61■□□□□ 0.41
GPATCH4-212ENST00000525375 ADAMTS13Q76LX8 1427 aa17.61■□□□□ 0.41
GPATCH4-212ENST00000525375 ZNF326Q5BKZ1 582 aaKnown RBP17.6■□□□□ 0.41
GPATCH4-212ENST00000525375 ACIN1Q9UKV3 1341 aaKnown RBP17.6■□□□□ 0.41
GPATCH4-212ENST00000525375 SLC26A8Q96RN1 970 aa17.59■□□□□ 0.41
GPATCH4-212ENST00000525375 PPP1R15AO75807 674 aaPredicted RBP17.57■□□□□ 0.4
GPATCH4-212ENST00000525375 SETBP1Q9Y6X0 1596 aa17.57■□□□□ 0.4
GPATCH4-212ENST00000525375 DHX57Q6P158 1386 aaKnown RBP17.56■□□□□ 0.4
GPATCH4-212ENST00000525375 SETD1AO15047 1707 aaKnown RBP17.55■□□□□ 0.4
GPATCH4-212ENST00000525375 NWD1Q149M9 1564 aa17.55■□□□□ 0.4
GPATCH4-212ENST00000525375 RGL3Q3MIN7 710 aa17.54■□□□□ 0.4
GPATCH4-212ENST00000525375 CERKQ8TCT0 537 aa17.54■□□□□ 0.4
GPATCH4-212ENST00000525375 DIP2AQ14689 1571 aa17.53■□□□□ 0.4
GPATCH4-212ENST00000525375 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.53■□□□□ 0.4
GPATCH4-212ENST00000525375 PTPRUQ92729 1446 aa17.52■□□□□ 0.4
GPATCH4-212ENST00000525375 CPS1P31327 1500 aa17.52■□□□□ 0.39
GPATCH4-212ENST00000525375 LRRC7Q96NW7 1537 aa17.52■□□□□ 0.39
GPATCH4-212ENST00000525375 XIRP1Q702N8 1843 aaKnown RBP17.51■□□□□ 0.39
GPATCH4-212ENST00000525375 BCANQ96GW7 911 aa17.51■□□□□ 0.39
GPATCH4-212ENST00000525375 PCGF6Q9BYE7 350 aa17.51■□□□□ 0.39
GPATCH4-212ENST00000525375 CHD2O14647 1828 aaKnown RBP17.51■□□□□ 0.39
GPATCH4-212ENST00000525375 ADGRF5Q8IZF2 1346 aa17.5■□□□□ 0.39
GPATCH4-212ENST00000525375 ASXL1Q8IXJ9 1541 aa17.49■□□□□ 0.39
GPATCH4-212ENST00000525375 METP08581 1390 aa17.49■□□□□ 0.39
GPATCH4-212ENST00000525375 RPGRIP1LQ68CZ1 1315 aa17.48■□□□□ 0.39
GPATCH4-212ENST00000525375 ALKQ9UM73 1620 aa17.48■□□□□ 0.39
GPATCH4-212ENST00000525375 XRN1Q8IZH2 1706 aaKnown RBP17.48■□□□□ 0.39
GPATCH4-212ENST00000525375 HDGFP51858 240 aaKnown RBP17.47■□□□□ 0.39
GPATCH4-212ENST00000525375 NRXN1Q9ULB1 1477 aa17.47■□□□□ 0.39
GPATCH4-212ENST00000525375 PIK3C2GO75747 1445 aa17.47■□□□□ 0.39
GPATCH4-212ENST00000525375 MYOM2P54296 1465 aa17.46■□□□□ 0.39
GPATCH4-212ENST00000525375 RBM33Q96EV2 1170 aaKnown RBP17.46■□□□□ 0.39
GPATCH4-212ENST00000525375 SIN3AQ96ST3 1273 aa17.46■□□□□ 0.39
GPATCH4-212ENST00000525375 TBX22Q9Y458 520 aa17.46■□□□□ 0.39
GPATCH4-212ENST00000525375 NKTRP30414 1462 aaKnown RBP17.44■□□□□ 0.38
GPATCH4-212ENST00000525375 IQSEC2Q5JU85 1478 aa17.44■□□□□ 0.38
GPATCH4-212ENST00000525375 KCNA6P17658 529 aa17.44■□□□□ 0.38
GPATCH4-212ENST00000525375 VGFO15240 615 aaPredicted RBP17.42■□□□□ 0.38
GPATCH4-212ENST00000525375 TMEM94Q12767 1356 aa17.41■□□□□ 0.38
GPATCH4-212ENST00000525375 PIK3R4Q99570 1358 aa17.4■□□□□ 0.38
GPATCH4-212ENST00000525375 ILDR1Q86SU0 546 aaPredicted RBP17.4■□□□□ 0.38
GPATCH4-212ENST00000525375 AMOTL2Q9Y2J4 779 aa17.38■□□□□ 0.37
GPATCH4-212ENST00000525375 DCAF11Q8TEB1 546 aa17.37■□□□□ 0.37
GPATCH4-212ENST00000525375 FBXO41Q8TF61 875 aa17.37■□□□□ 0.37
GPATCH4-212ENST00000525375 KDM2AQ9Y2K7 1162 aa17.37■□□□□ 0.37
GPATCH4-212ENST00000525375 CFAP70Q5T0N1 1121 aa17.36■□□□□ 0.37
GPATCH4-212ENST00000525375 LAMC1P11047 1609 aa17.36■□□□□ 0.37
GPATCH4-212ENST00000525375 NEUROD1Q13562 356 aa17.35■□□□□ 0.37
GPATCH4-212ENST00000525375 TMEM132EQ6IEE7 984 aa17.35■□□□□ 0.37
GPATCH4-212ENST00000525375 PROSER2Q86WR7 435 aaPredicted RBP17.35■□□□□ 0.37
GPATCH4-212ENST00000525375 ROBO2Q9HCK4 1378 aa17.35■□□□□ 0.37
GPATCH4-212ENST00000525375 ADGRB1O14514 1584 aa17.35■□□□□ 0.37
GPATCH4-212ENST00000525375 NALCNQ8IZF0 1738 aa17.35■□□□□ 0.37
GPATCH4-212ENST00000525375 KNDC1Q76NI1 1749 aa17.34■□□□□ 0.37
GPATCH4-212ENST00000525375 PRAG1Q86YV5 1406 aa17.34■□□□□ 0.37
GPATCH4-212ENST00000525375 PTCH1Q13635 1447 aa17.33■□□□□ 0.36
GPATCH4-212ENST00000525375 UBAP1LF5GYI3 381 aa17.32■□□□□ 0.36
GPATCH4-212ENST00000525375 L3MBTL2Q969R5 705 aa17.32■□□□□ 0.36
GPATCH4-212ENST00000525375 C14orf93Q9H972 538 aaKnown RBP17.32■□□□□ 0.36
GPATCH4-212ENST00000525375 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.31■□□□□ 0.36
GPATCH4-212ENST00000525375 YTHDC2Q9H6S0 1430 aaKnown RBP17.3■□□□□ 0.36
GPATCH4-212ENST00000525375 PLEKHH1Q9ULM0 1364 aa17.3■□□□□ 0.36
GPATCH4-212ENST00000525375 TECPR2O15040 1411 aa17.3■□□□□ 0.36
GPATCH4-212ENST00000525375 LRPPRCP42704 1394 aaKnown RBP17.29■□□□□ 0.36
GPATCH4-212ENST00000525375 STK26Q9P289 416 aa17.29■□□□□ 0.36
GPATCH4-212ENST00000525375 ADGRL3Q9HAR2 1447 aa17.27■□□□□ 0.35
GPATCH4-212ENST00000525375 PIP4K2BP78356 416 aa17.26■□□□□ 0.35
GPATCH4-212ENST00000525375 KIAA1210Q9ULL0 1709 aa17.26■□□□□ 0.35
GPATCH4-212ENST00000525375 TRPM1Q7Z4N2 1603 aa17.25■□□□□ 0.35
GPATCH4-212ENST00000525375 NCOA3Q9Y6Q9 1424 aa17.25■□□□□ 0.35
GPATCH4-212ENST00000525375 MSH6P52701 1360 aa17.25■□□□□ 0.35
GPATCH4-212ENST00000525375 ABCC11Q96J66 1382 aa17.25■□□□□ 0.35
GPATCH4-212ENST00000525375 WAPLQ7Z5K2 1190 aa17.24■□□□□ 0.35
GPATCH4-212ENST00000525375 ARHGEF28Q8N1W1 1705 aaKnown RBP17.24■□□□□ 0.35
GPATCH4-212ENST00000525375 ROBO1Q9Y6N7 1651 aa17.23■□□□□ 0.35
GPATCH4-212ENST00000525375 NBPF1Q3BBV0 1214 aa17.23■□□□□ 0.35
GPATCH4-212ENST00000525375 SCAF1Q9H7N4 1312 aaKnown RBP17.22■□□□□ 0.35
GPATCH4-212ENST00000525375 DLC1Q96QB1 1528 aa17.22■□□□□ 0.35
GPATCH4-212ENST00000525375 TOM1O60784 492 aa17.22■□□□□ 0.35
GPATCH4-212ENST00000525375 NBPF8Q3BBV2 869 aa17.22■□□□□ 0.35
GPATCH4-212ENST00000525375 C14orf37Q86TY3 774 aa17.22■□□□□ 0.35
GPATCH4-212ENST00000525375 MST1RQ04912 1400 aa17.21■□□□□ 0.34
GPATCH4-212ENST00000525375 TONSLQ96HA7 1378 aa17.2■□□□□ 0.34
GPATCH4-212ENST00000525375 STAC3Q96MF2 364 aa17.2■□□□□ 0.34
GPATCH4-212ENST00000525375 DCCP43146 1447 aa17.2■□□□□ 0.34
GPATCH4-212ENST00000525375 CDC42BPGQ6DT37 1551 aa17.19■□□□□ 0.34
GPATCH4-212ENST00000525375 C19orf44Q9H6X5 657 aa17.19■□□□□ 0.34
GPATCH4-212ENST00000525375 TRAK1Q9UPV9 953 aa17.19■□□□□ 0.34
GPATCH4-212ENST00000525375 FAM135BQ49AJ0 1406 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms