RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 ADGRB3O60242 1522 aa19.05■□□□□ 0.64
SMCO4-202ENST00000525141 ZFYVE9O95405 1425 aa19.04■□□□□ 0.64
SMCO4-202ENST00000525141 KCNA6P17658 529 aa19.04■□□□□ 0.64
SMCO4-202ENST00000525141 HSPA1LP34931 641 aa19.04■□□□□ 0.64
SMCO4-202ENST00000525141 MYO5BQ9ULV0 1848 aa19.04■□□□□ 0.64
SMCO4-202ENST00000525141 TMEM131LA2VDJ0 1609 aa19.03■□□□□ 0.64
SMCO4-202ENST00000525141 NAIPQ13075 1403 aa19.03■□□□□ 0.64
SMCO4-202ENST00000525141 CHGAP10645 457 aaKnown RBP19.02■□□□□ 0.64
SMCO4-202ENST00000525141 NUTM2DQ5VT03 806 aaPredicted RBP19.02■□□□□ 0.64
SMCO4-202ENST00000525141 RIMS2Q9UQ26 1411 aa19■□□□□ 0.63
SMCO4-202ENST00000525141 RBM33Q96EV2 1170 aaKnown RBP19■□□□□ 0.63
SMCO4-202ENST00000525141 XIRP1Q702N8 1843 aaKnown RBP19■□□□□ 0.63
SMCO4-202ENST00000525141 SCAF1Q9H7N4 1312 aaKnown RBP19■□□□□ 0.63
SMCO4-202ENST00000525141 ILDR2Q71H61 639 aa18.99■□□□□ 0.63
SMCO4-202ENST00000525141 HDGFP51858 240 aaKnown RBP18.98■□□□□ 0.63
SMCO4-202ENST00000525141 DISP3Q9P2K9 1392 aa18.97■□□□□ 0.63
SMCO4-202ENST00000525141 PLEKHG1Q9ULL1 1385 aa18.97■□□□□ 0.63
SMCO4-202ENST00000525141 BCANQ96GW7 911 aa18.97■□□□□ 0.63
SMCO4-202ENST00000525141 TBX22Q9Y458 520 aa18.97■□□□□ 0.63
SMCO4-202ENST00000525141 PROSER2Q86WR7 435 aaPredicted RBP18.96■□□□□ 0.63
SMCO4-202ENST00000525141 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.95■□□□□ 0.62
SMCO4-202ENST00000525141 TMEM94Q12767 1356 aa18.94■□□□□ 0.62
SMCO4-202ENST00000525141 PPP1R15AO75807 674 aaPredicted RBP18.93■□□□□ 0.62
SMCO4-202ENST00000525141 ADAMTS13Q76LX8 1427 aa18.92■□□□□ 0.62
SMCO4-202ENST00000525141 TRIM52Q96A61 297 aa18.92■□□□□ 0.62
SMCO4-202ENST00000525141 HFM1A2PYH4 1435 aa18.91■□□□□ 0.62
SMCO4-202ENST00000525141 CHD2O14647 1828 aaKnown RBP18.89■□□□□ 0.61
SMCO4-202ENST00000525141 SPHKAPQ2M3C7 1700 aa18.86■□□□□ 0.61
SMCO4-202ENST00000525141 NWD1Q149M9 1564 aa18.86■□□□□ 0.61
SMCO4-202ENST00000525141 PTPRUQ92729 1446 aa18.85■□□□□ 0.61
SMCO4-202ENST00000525141 ZNF326Q5BKZ1 582 aaKnown RBP18.85■□□□□ 0.61
SMCO4-202ENST00000525141 SLC4A1APQ9BWU0 796 aaKnown RBP18.85■□□□□ 0.61
SMCO4-202ENST00000525141 FAM135BQ49AJ0 1406 aa18.84■□□□□ 0.61
SMCO4-202ENST00000525141 AMOTL2Q9Y2J4 779 aa18.84■□□□□ 0.61
SMCO4-202ENST00000525141 CLTCL1P53675 1640 aa18.83■□□□□ 0.61
SMCO4-202ENST00000525141 SLAIN2Q9P270 581 aa18.82■□□□□ 0.6
SMCO4-202ENST00000525141 NKTRP30414 1462 aaKnown RBP18.82■□□□□ 0.6
SMCO4-202ENST00000525141 PIK3R4Q99570 1358 aa18.81■□□□□ 0.6
SMCO4-202ENST00000525141 TRPM2O94759 1503 aa18.8■□□□□ 0.6
SMCO4-202ENST00000525141 MPHOSPH9Q99550 1183 aa18.8■□□□□ 0.6
SMCO4-202ENST00000525141 METP08581 1390 aa18.8■□□□□ 0.6
SMCO4-202ENST00000525141 NRXN3Q9Y4C0 1643 aa18.79■□□□□ 0.6
SMCO4-202ENST00000525141 NCOA3Q9Y6Q9 1424 aa18.77■□□□□ 0.6
SMCO4-202ENST00000525141 C19orf44Q9H6X5 657 aa18.77■□□□□ 0.6
SMCO4-202ENST00000525141 NEXMIFQ5QGS0 1516 aa18.77■□□□□ 0.6
SMCO4-202ENST00000525141 MSH6P52701 1360 aa18.77■□□□□ 0.6
SMCO4-202ENST00000525141 DIP2AQ14689 1571 aa18.76■□□□□ 0.59
SMCO4-202ENST00000525141 SETBP1Q9Y6X0 1596 aa18.75■□□□□ 0.59
SMCO4-202ENST00000525141 MED1Q15648 1581 aaPredicted RBP18.74■□□□□ 0.59
SMCO4-202ENST00000525141 SOCS7O14512 581 aa18.74■□□□□ 0.59
SMCO4-202ENST00000525141 KIF1BO60333 1816 aa18.74■□□□□ 0.59
SMCO4-202ENST00000525141 VGFO15240 615 aaPredicted RBP18.73■□□□□ 0.59
SMCO4-202ENST00000525141 RPGRIP1LQ68CZ1 1315 aa18.73■□□□□ 0.59
SMCO4-202ENST00000525141 ROBO1Q9Y6N7 1651 aa18.72■□□□□ 0.59
SMCO4-202ENST00000525141 C14orf37Q86TY3 774 aa18.71■□□□□ 0.59
SMCO4-202ENST00000525141 RGS17Q9UGC6 210 aaPredicted RBP18.71■□□□□ 0.59
SMCO4-202ENST00000525141 SETD5Q9C0A6 1442 aa18.7■□□□□ 0.58
SMCO4-202ENST00000525141 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.7■□□□□ 0.58
SMCO4-202ENST00000525141 CADPS2Q86UW7 1296 aa18.69■□□□□ 0.58
SMCO4-202ENST00000525141 ATF3P18847 181 aa18.68■□□□□ 0.58
SMCO4-202ENST00000525141 RGL3Q3MIN7 710 aa18.68■□□□□ 0.58
SMCO4-202ENST00000525141 ADGRF5Q8IZF2 1346 aa18.68■□□□□ 0.58
SMCO4-202ENST00000525141 XRN1Q8IZH2 1706 aaKnown RBP18.67■□□□□ 0.58
SMCO4-202ENST00000525141 SPATA31E1Q6ZUB1 1445 aa18.66■□□□□ 0.58
SMCO4-202ENST00000525141 BRINP3Q76B58 766 aa18.64■□□□□ 0.57
SMCO4-202ENST00000525141 RAB3GAP2Q9H2M9 1393 aa18.63■□□□□ 0.57
SMCO4-202ENST00000525141 SETD1AO15047 1707 aaKnown RBP18.63■□□□□ 0.57
SMCO4-202ENST00000525141 PPLO60437 1756 aa18.63■□□□□ 0.57
SMCO4-202ENST00000525141 ROBO2Q9HCK4 1378 aa18.62■□□□□ 0.57
SMCO4-202ENST00000525141 CCDC144AA2RUR9 1427 aa18.62■□□□□ 0.57
SMCO4-202ENST00000525141 ACIN1Q9UKV3 1341 aaKnown RBP18.6■□□□□ 0.57
SMCO4-202ENST00000525141 PHLPP1O60346 1717 aa18.6■□□□□ 0.57
SMCO4-202ENST00000525141 MST1RQ04912 1400 aa18.59■□□□□ 0.57
SMCO4-202ENST00000525141 DCCP43146 1447 aa18.57■□□□□ 0.56
SMCO4-202ENST00000525141 JCADQ9P266 1359 aa18.57■□□□□ 0.56
SMCO4-202ENST00000525141 HRCP23327 699 aa18.57■□□□□ 0.56
SMCO4-202ENST00000525141 TMEM132EQ6IEE7 984 aa18.57■□□□□ 0.56
SMCO4-202ENST00000525141 POTEAQ6S8J7 498 aa18.57■□□□□ 0.56
SMCO4-202ENST00000525141 DDX17Q92841 729 aaKnown RBP18.57■□□□□ 0.56
SMCO4-202ENST00000525141 ADGRL3Q9HAR2 1447 aa18.57■□□□□ 0.56
SMCO4-202ENST00000525141 COL16A1Q07092 1604 aaPredicted RBP18.56■□□□□ 0.56
SMCO4-202ENST00000525141 WAPLQ7Z5K2 1190 aa18.55■□□□□ 0.56
SMCO4-202ENST00000525141 ANKRD30BQ9BXX2 1392 aa18.55■□□□□ 0.56
SMCO4-202ENST00000525141 STK26Q9P289 416 aa18.54■□□□□ 0.56
SMCO4-202ENST00000525141 PRAG1Q86YV5 1406 aa18.54■□□□□ 0.56
SMCO4-202ENST00000525141 AHDC1Q5TGY3 1603 aaPredicted RBP18.53■□□□□ 0.56
SMCO4-202ENST00000525141 PTCH1Q13635 1447 aa18.53■□□□□ 0.56
SMCO4-202ENST00000525141 ORAI2Q96SN7 254 aa18.53■□□□□ 0.56
SMCO4-202ENST00000525141 C14orf93Q9H972 538 aaKnown RBP18.53■□□□□ 0.56
SMCO4-202ENST00000525141 NALCNQ8IZF0 1738 aa18.52■□□□□ 0.56
SMCO4-202ENST00000525141 IFT172Q9UG01 1749 aa18.52■□□□□ 0.56
SMCO4-202ENST00000525141 CFAP70Q5T0N1 1121 aa18.51■□□□□ 0.55
SMCO4-202ENST00000525141 C1orf167Q5SNV9 1468 aa18.51■□□□□ 0.55
SMCO4-202ENST00000525141 ASXL1Q8IXJ9 1541 aa18.5■□□□□ 0.55
SMCO4-202ENST00000525141 ABCC11Q96J66 1382 aa18.5■□□□□ 0.55
SMCO4-202ENST00000525141 PIK3C2GO75747 1445 aa18.49■□□□□ 0.55
SMCO4-202ENST00000525141 LRPPRCP42704 1394 aaKnown RBP18.49■□□□□ 0.55
SMCO4-202ENST00000525141 LRP6O75581 1613 aa18.49■□□□□ 0.55
SMCO4-202ENST00000525141 SPATA31A6Q5VVP1 1343 aa18.49■□□□□ 0.55
SMCO4-202ENST00000525141 PLEKHH1Q9ULM0 1364 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms