RNA–Protein interactions for RNA: ENST00000525074.5

TRIM3-203, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRIM3, Length 3,044 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-203ENST00000525074 CROCC2H7BZ55 1655 aa16.95■□□□□ 0.3
TRIM3-203ENST00000525074 ARHGEF12Q9NZN5 1544 aa16.95■□□□□ 0.3
TRIM3-203ENST00000525074 NEUROD2Q15784 382 aa16.94■□□□□ 0.3
TRIM3-203ENST00000525074 ABCA8O94911 1581 aa16.94■□□□□ 0.3
TRIM3-203ENST00000525074 SLFN5Q08AF3 891 aa16.94■□□□□ 0.3
TRIM3-203ENST00000525074 A2MP01023 1474 aa16.93■□□□□ 0.3
TRIM3-203ENST00000525074 ERBINQ96RT1 1412 aa16.93■□□□□ 0.3
TRIM3-203ENST00000525074 CCDC141Q6ZP82 1450 aa16.92■□□□□ 0.3
TRIM3-203ENST00000525074 SAMD9LQ8IVG5 1584 aa16.92■□□□□ 0.3
TRIM3-203ENST00000525074 COL17A1Q9UMD9 1497 aaPredicted RBP16.91■□□□□ 0.3
TRIM3-203ENST00000525074 CHGAP10645 457 aaKnown RBP16.9■□□□□ 0.3
TRIM3-203ENST00000525074 BCL2L13Q9BXK5 485 aa16.9■□□□□ 0.3
TRIM3-203ENST00000525074 PANK2Q9BZ23 570 aa16.9■□□□□ 0.3
TRIM3-203ENST00000525074 ERCC6L2Q5T890 1561 aa16.9■□□□□ 0.3
TRIM3-203ENST00000525074 KDM5DQ9BY66 1539 aa16.89■□□□□ 0.29
TRIM3-203ENST00000525074 NAP1L5Q96NT1 182 aaPredicted RBP16.89■□□□□ 0.29
TRIM3-203ENST00000525074 BECN1Q14457 450 aa16.89■□□□□ 0.29
TRIM3-203ENST00000525074 ZNF521Q96K83 1311 aa16.89■□□□□ 0.29
TRIM3-203ENST00000525074 TNNQ9UQP3 1299 aa16.88■□□□□ 0.29
TRIM3-203ENST00000525074 NUTM2DQ5VT03 806 aaPredicted RBP16.88■□□□□ 0.29
TRIM3-203ENST00000525074 ADCY10Q96PN6 1610 aa16.88■□□□□ 0.29
TRIM3-203ENST00000525074 CLUAP1Q96AJ1 413 aa16.87■□□□□ 0.29
TRIM3-203ENST00000525074 RRP7AQ9Y3A4 280 aaKnown RBP16.87■□□□□ 0.29
TRIM3-203ENST00000525074 AMER1Q5JTC6 1135 aaPredicted RBP16.86■□□□□ 0.29
TRIM3-203ENST00000525074 MAGI2Q86UL8 1455 aa16.86■□□□□ 0.29
TRIM3-203ENST00000525074 TTC37Q6PGP7 1564 aa16.86■□□□□ 0.29
TRIM3-203ENST00000525074 CFAP70Q5T0N1 1121 aa16.86■□□□□ 0.29
TRIM3-203ENST00000525074 SHANK2Q9UPX8 1470 aa16.85■□□□□ 0.29
TRIM3-203ENST00000525074 CDC42BPBQ9Y5S2 1711 aa16.85■□□□□ 0.29
TRIM3-203ENST00000525074 XRCC6P12956 609 aaKnown RBP eCLIP16.84■□□□□ 0.29
TRIM3-203ENST00000525074 KIF3BO15066 747 aa16.84■□□□□ 0.29
TRIM3-203ENST00000525074 TBC1D2Q9BYX2 928 aa16.84■□□□□ 0.29
TRIM3-203ENST00000525074 TRPM1Q7Z4N2 1603 aa16.84■□□□□ 0.29
TRIM3-203ENST00000525074 TRAPPC8Q9Y2L5 1435 aa16.83■□□□□ 0.28
TRIM3-203ENST00000525074 CENPJQ9HC77 1338 aaPredicted RBP16.82■□□□□ 0.28
TRIM3-203ENST00000525074 UPF2Q9HAU5 1272 aaKnown RBP16.81■□□□□ 0.28
TRIM3-203ENST00000525074 L1TD1Q5T7N2 865 aaKnown RBP16.81■□□□□ 0.28
TRIM3-203ENST00000525074 ANTXR1Q9H6X2 564 aa16.81■□□□□ 0.28
TRIM3-203ENST00000525074 SPAG9O60271 1321 aaKnown RBP16.81■□□□□ 0.28
TRIM3-203ENST00000525074 EIF3AQ14152 1382 aaKnown RBP16.81■□□□□ 0.28
TRIM3-203ENST00000525074 GOLGA6L3A6NEY3 463 aa16.8■□□□□ 0.28
TRIM3-203ENST00000525074 EFCAB2Q5VUJ9 269 aa16.8■□□□□ 0.28
TRIM3-203ENST00000525074 PCDHB15Q9Y5E8 787 aa16.8■□□□□ 0.28
TRIM3-203ENST00000525074 NKTRP30414 1462 aaKnown RBP16.8■□□□□ 0.28
TRIM3-203ENST00000525074 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.8■□□□□ 0.28
TRIM3-203ENST00000525074 RSPH4AQ5TD94 716 aa16.79■□□□□ 0.28
TRIM3-203ENST00000525074 GPRASP1Q5JY77 1395 aa16.79■□□□□ 0.28
TRIM3-203ENST00000525074 E9PSI1 815 aa16.79■□□□□ 0.28
TRIM3-203ENST00000525074 RLBP1P12271 317 aa16.79■□□□□ 0.28
TRIM3-203ENST00000525074 PNNQ9H307 717 aaKnown RBP16.79■□□□□ 0.28
TRIM3-203ENST00000525074 TRMT2AQ8IZ69 625 aaKnown RBP16.78■□□□□ 0.28
TRIM3-203ENST00000525074 MAPK8IP3Q9UPT6 1336 aa16.78■□□□□ 0.28
TRIM3-203ENST00000525074 SAFB2Q14151 953 aaKnown RBP eCLIP16.78■□□□□ 0.28
TRIM3-203ENST00000525074 PDZRN3Q9UPQ7 1066 aa16.78■□□□□ 0.28
TRIM3-203ENST00000525074 CGNL1Q0VF96 1302 aa16.78■□□□□ 0.28
TRIM3-203ENST00000525074 MFAP1P55081 439 aaKnown RBP16.78■□□□□ 0.28
TRIM3-203ENST00000525074 WDR7Q9Y4E6 1490 aa16.77■□□□□ 0.28
TRIM3-203ENST00000525074 VSIG10Q8N0Z9 540 aa16.77■□□□□ 0.27
TRIM3-203ENST00000525074 INSRP06213 1382 aa16.76■□□□□ 0.27
TRIM3-203ENST00000525074 TMEM132EQ6IEE7 984 aa16.76■□□□□ 0.27
TRIM3-203ENST00000525074 ADGRF5Q8IZF2 1346 aa16.76■□□□□ 0.27
TRIM3-203ENST00000525074 TRAK1Q9UPV9 953 aa16.76■□□□□ 0.27
TRIM3-203ENST00000525074 TBC1D32Q96NH3 1257 aa16.75■□□□□ 0.27
TRIM3-203ENST00000525074 MCM4P33991 863 aa16.75■□□□□ 0.27
TRIM3-203ENST00000525074 PRDM15P57071 1507 aaPredicted RBP16.75■□□□□ 0.27
TRIM3-203ENST00000525074 WWC1Q8IX03 1113 aa16.74■□□□□ 0.27
TRIM3-203ENST00000525074 CARD14Q9BXL6 1004 aa16.74■□□□□ 0.27
TRIM3-203ENST00000525074 ARHGEF5Q12774 1597 aa16.74■□□□□ 0.27
TRIM3-203ENST00000525074 PDE3AQ14432 1141 aa16.73■□□□□ 0.27
TRIM3-203ENST00000525074 PREX2Q70Z35 1606 aa16.73■□□□□ 0.27
TRIM3-203ENST00000525074 NLRP1Q9C000 1473 aa16.72■□□□□ 0.27
TRIM3-203ENST00000525074 TRAK2O60296 914 aa16.72■□□□□ 0.27
TRIM3-203ENST00000525074 PKNOX2Q96KN3 472 aa16.72■□□□□ 0.27
TRIM3-203ENST00000525074 UGGT1Q9NYU2 1555 aa16.71■□□□□ 0.27
TRIM3-203ENST00000525074 GGT6Q6P531 493 aa16.71■□□□□ 0.27
TRIM3-203ENST00000525074 SLC12A5Q9H2X9 1139 aa16.7■□□□□ 0.26
TRIM3-203ENST00000525074 SCAPERQ9BY12 1400 aa16.69■□□□□ 0.26
TRIM3-203ENST00000525074 RARSP54136 660 aaKnown RBP16.69■□□□□ 0.26
TRIM3-203ENST00000525074 HSP90AA2PQ14568 343 aaPredicted RBP16.69■□□□□ 0.26
TRIM3-203ENST00000525074 FOXD4L1Q9NU39 408 aa16.69■□□□□ 0.26
TRIM3-203ENST00000525074 HSP90AA1P07900 732 aaKnown RBP16.68■□□□□ 0.26
TRIM3-203ENST00000525074 PMFBP1Q8TBY8 1022 aa16.68■□□□□ 0.26
TRIM3-203ENST00000525074 C22orf23Q9BZE7 217 aa16.68■□□□□ 0.26
TRIM3-203ENST00000525074 MYO5CQ9NQX4 1742 aa16.68■□□□□ 0.26
TRIM3-203ENST00000525074 FSD2A1L4K1 749 aa16.67■□□□□ 0.26
TRIM3-203ENST00000525074 CDCA8Q53HL2 280 aa16.67■□□□□ 0.26
TRIM3-203ENST00000525074 ASXL1Q8IXJ9 1541 aa16.66■□□□□ 0.26
TRIM3-203ENST00000525074 CHD1O14646 1710 aa16.66■□□□□ 0.26
TRIM3-203ENST00000525074 ERBB4Q15303 1308 aa16.66■□□□□ 0.26
TRIM3-203ENST00000525074 TCP11L2Q8N4U5 519 aa16.66■□□□□ 0.26
TRIM3-203ENST00000525074 ZMYND15Q9H091 742 aa16.66■□□□□ 0.26
TRIM3-203ENST00000525074 MYH16Q9H6N6 1097 aa16.65■□□□□ 0.26
TRIM3-203ENST00000525074 CLCN1P35523 988 aa16.65■□□□□ 0.26
TRIM3-203ENST00000525074 PIK3C2GO75747 1445 aa16.65■□□□□ 0.26
TRIM3-203ENST00000525074 GLIPR1L2Q4G1C9 344 aa16.64■□□□□ 0.26
TRIM3-203ENST00000525074 PLCH2O75038 1416 aa16.64■□□□□ 0.25
TRIM3-203ENST00000525074 RWDD1Q9H446 243 aaPredicted RBP16.64■□□□□ 0.25
TRIM3-203ENST00000525074 CHMP5Q9NZZ3 219 aa16.64■□□□□ 0.25
TRIM3-203ENST00000525074 CFAP65Q6ZU64 1925 aaKnown RBP16.64■□□□□ 0.25
TRIM3-203ENST00000525074 GRPEL1Q9HAV7 217 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms