RNA–Protein interactions for RNA: ENST00000524592.1

YPEL4-202, Transcript of yippee like 4, humanhuman

TSL 1 (best)

Gene YPEL4, Length 1,893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YPEL4-202ENST00000524592 NBPF1Q3BBV0 1214 aa17.29■□□□□ 0.36
YPEL4-202ENST00000524592 C20orf194Q5TEA3 1177 aa17.29■□□□□ 0.36
YPEL4-202ENST00000524592 BRPF3Q9ULD4 1205 aa17.29■□□□□ 0.36
YPEL4-202ENST00000524592 SCAPERQ9BY12 1400 aa17.29■□□□□ 0.36
YPEL4-202ENST00000524592 NKTRP30414 1462 aaKnown RBP17.29■□□□□ 0.36
YPEL4-202ENST00000524592 SENP3-EIF4A1A0A087X0R7 540 aa17.29■□□□□ 0.36
YPEL4-202ENST00000524592 SLFN5Q08AF3 891 aa17.29■□□□□ 0.36
YPEL4-202ENST00000524592 CDCA8Q53HL2 280 aa17.29■□□□□ 0.36
YPEL4-202ENST00000524592 ADAMTS8Q9UP79 889 aa17.29■□□□□ 0.36
YPEL4-202ENST00000524592 DUOX2Q9NRD8 1548 aa17.28■□□□□ 0.36
YPEL4-202ENST00000524592 MADDQ8WXG6 1647 aa17.28■□□□□ 0.36
YPEL4-202ENST00000524592 NEURL4Q96JN8 1562 aa17.27■□□□□ 0.36
YPEL4-202ENST00000524592 RSPH6AQ9H0K4 717 aa17.27■□□□□ 0.36
YPEL4-202ENST00000524592 PPP2R1AP30153 589 aa17.27■□□□□ 0.35
YPEL4-202ENST00000524592 AMER1Q5JTC6 1135 aaPredicted RBP17.27■□□□□ 0.35
YPEL4-202ENST00000524592 CC2D1BQ5T0F9 858 aaKnown RBP17.27■□□□□ 0.35
YPEL4-202ENST00000524592 UBE2Q2Q8WVN8 375 aa17.27■□□□□ 0.35
YPEL4-202ENST00000524592 MAPK8IP3Q9UPT6 1336 aa17.26■□□□□ 0.35
YPEL4-202ENST00000524592 KIAA1210Q9ULL0 1709 aa17.26■□□□□ 0.35
YPEL4-202ENST00000524592 WDR43Q15061 677 aaKnown RBP eCLIP17.25■□□□□ 0.35
YPEL4-202ENST00000524592 RTN4Q9NQC3 1192 aaKnown RBP17.25■□□□□ 0.35
YPEL4-202ENST00000524592 JPH4Q96JJ6 628 aa17.24■□□□□ 0.35
YPEL4-202ENST00000524592 SLC24A1O60721 1099 aa17.24■□□□□ 0.35
YPEL4-202ENST00000524592 PDE3AQ14432 1141 aa17.24■□□□□ 0.35
YPEL4-202ENST00000524592 MYOM1P52179 1685 aa17.24■□□□□ 0.35
YPEL4-202ENST00000524592 CGNL1Q0VF96 1302 aa17.24■□□□□ 0.35
YPEL4-202ENST00000524592 SPHKAPQ2M3C7 1700 aa17.23■□□□□ 0.35
YPEL4-202ENST00000524592 SCAF11Q99590 1463 aaKnown RBP17.22■□□□□ 0.35
YPEL4-202ENST00000524592 KNSTRNQ9Y448 316 aa17.22■□□□□ 0.35
YPEL4-202ENST00000524592 E9PSI1 815 aa17.21■□□□□ 0.35
YPEL4-202ENST00000524592 NLRP1Q9C000 1473 aa17.21■□□□□ 0.35
YPEL4-202ENST00000524592 SYCP2Q9BX26 1530 aa17.21■□□□□ 0.35
YPEL4-202ENST00000524592 USP19O94966 1318 aa17.21■□□□□ 0.35
YPEL4-202ENST00000524592 TTC37Q6PGP7 1564 aa17.21■□□□□ 0.35
YPEL4-202ENST00000524592 HNRNPMP52272 730 aaKnown RBP eCLIP17.2■□□□□ 0.34
YPEL4-202ENST00000524592 FRAT2O75474 233 aaPredicted RBP17.2■□□□□ 0.34
YPEL4-202ENST00000524592 BECN1Q14457 450 aa17.2■□□□□ 0.34
YPEL4-202ENST00000524592 SKAP1Q86WV1 359 aa17.19■□□□□ 0.34
YPEL4-202ENST00000524592 ERCC6Q03468 1493 aa17.19■□□□□ 0.34
YPEL4-202ENST00000524592 TRPM2O94759 1503 aa17.19■□□□□ 0.34
YPEL4-202ENST00000524592 CHMP7Q8WUX9 453 aaPredicted RBP17.18■□□□□ 0.34
YPEL4-202ENST00000524592 CEP152O94986 1710 aa17.18■□□□□ 0.34
YPEL4-202ENST00000524592 L1TD1Q5T7N2 865 aaKnown RBP17.18■□□□□ 0.34
YPEL4-202ENST00000524592 SLC4A3P48751 1232 aa17.17■□□□□ 0.34
YPEL4-202ENST00000524592 KDM5AP29375 1690 aaKnown RBP17.17■□□□□ 0.34
YPEL4-202ENST00000524592 NCBP3Q53F19 620 aaKnown RBP17.15■□□□□ 0.34
YPEL4-202ENST00000524592 PTPRTO14522 1441 aa17.15■□□□□ 0.34
YPEL4-202ENST00000524592 RGL3Q3MIN7 710 aa17.13■□□□□ 0.33
YPEL4-202ENST00000524592 ANTXR1Q9H6X2 564 aa17.12■□□□□ 0.33
YPEL4-202ENST00000524592 ARHGAP5Q13017 1502 aa17.12■□□□□ 0.33
YPEL4-202ENST00000524592 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.12■□□□□ 0.33
YPEL4-202ENST00000524592 CLUAP1Q96AJ1 413 aa17.12■□□□□ 0.33
YPEL4-202ENST00000524592 POLR3AO14802 1390 aaPredicted RBP17.11■□□□□ 0.33
YPEL4-202ENST00000524592 SBNO2Q9Y2G9 1366 aa17.1■□□□□ 0.33
YPEL4-202ENST00000524592 DEPDC5O75140 1603 aa17.1■□□□□ 0.33
YPEL4-202ENST00000524592 MYO3AQ8NEV4 1616 aa17.1■□□□□ 0.33
YPEL4-202ENST00000524592 RGS3P49796 1198 aa17.1■□□□□ 0.33
YPEL4-202ENST00000524592 PMFBP1Q8TBY8 1022 aa17.1■□□□□ 0.33
YPEL4-202ENST00000524592 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.1■□□□□ 0.33
YPEL4-202ENST00000524592 KANK1Q14678 1352 aa17.09■□□□□ 0.33
YPEL4-202ENST00000524592 SHROOM2Q13796 1616 aa17.09■□□□□ 0.33
YPEL4-202ENST00000524592 MYOM2P54296 1465 aa17.08■□□□□ 0.32
YPEL4-202ENST00000524592 IGHDP01880 384 aa17.07■□□□□ 0.32
YPEL4-202ENST00000524592 TBC1D32Q96NH3 1257 aa17.07■□□□□ 0.32
YPEL4-202ENST00000524592 CENPJQ9HC77 1338 aaPredicted RBP17.07■□□□□ 0.32
YPEL4-202ENST00000524592 TET3O43151 1660 aa17.06■□□□□ 0.32
YPEL4-202ENST00000524592 RTEL1-TNFRSF6BF6WH68 1400 aa17.06■□□□□ 0.32
YPEL4-202ENST00000524592 PHF23Q9BUL5 403 aaPredicted RBP17.05■□□□□ 0.32
YPEL4-202ENST00000524592 UPF2Q9HAU5 1272 aaKnown RBP17.05■□□□□ 0.32
YPEL4-202ENST00000524592 ISY1Q9ULR0 285 aaKnown RBP17.05■□□□□ 0.32
YPEL4-202ENST00000524592 FSD2A1L4K1 749 aa17.05■□□□□ 0.32
YPEL4-202ENST00000524592 SPINK5Q9NQ38 1064 aaPredicted RBP17.05■□□□□ 0.32
YPEL4-202ENST00000524592 USP32Q8NFA0 1604 aa17.05■□□□□ 0.32
YPEL4-202ENST00000524592 IQSEC2Q5JU85 1478 aa17.05■□□□□ 0.32
YPEL4-202ENST00000524592 ARAP3Q8WWN8 1544 aa17.04■□□□□ 0.32
YPEL4-202ENST00000524592 VWDEQ8N2E2 1590 aa17.04■□□□□ 0.32
YPEL4-202ENST00000524592 APAF1O14727 1248 aa17.04■□□□□ 0.32
YPEL4-202ENST00000524592 ABCC1P33527 1531 aa17.04■□□□□ 0.32
YPEL4-202ENST00000524592 CLTCL1P53675 1640 aa17.04■□□□□ 0.32
YPEL4-202ENST00000524592 SHPRHQ149N8 1683 aa17.03■□□□□ 0.32
YPEL4-202ENST00000524592 BCAR3O75815 825 aa17.03■□□□□ 0.32
YPEL4-202ENST00000524592 ERVK-7P63135 1459 aa17.03■□□□□ 0.32
YPEL4-202ENST00000524592 POGKQ9P215 609 aa17.03■□□□□ 0.32
YPEL4-202ENST00000524592 CCDC27Q2M243 656 aa17.01■□□□□ 0.31
YPEL4-202ENST00000524592 PLCH2O75038 1416 aa17.01■□□□□ 0.31
YPEL4-202ENST00000524592 MAP3K4Q9Y6R4 1608 aa17.01■□□□□ 0.31
YPEL4-202ENST00000524592 ADGRL1O94910 1474 aa17.01■□□□□ 0.31
YPEL4-202ENST00000524592 WDR63Q8IWG1 891 aa17■□□□□ 0.31
YPEL4-202ENST00000524592 WWC1Q8IX03 1113 aa17■□□□□ 0.31
YPEL4-202ENST00000524592 NRXN1Q9ULB1 1477 aa16.99■□□□□ 0.31
YPEL4-202ENST00000524592 SEC24BO95487 1268 aa16.99■□□□□ 0.31
YPEL4-202ENST00000524592 IFT172Q9UG01 1749 aa16.98■□□□□ 0.31
YPEL4-202ENST00000524592 SETBP1Q9Y6X0 1596 aa16.98■□□□□ 0.31
YPEL4-202ENST00000524592 CT47B1P0C2W7 299 aaPredicted RBP16.98■□□□□ 0.31
YPEL4-202ENST00000524592 CLCN1P35523 988 aa16.97■□□□□ 0.31
YPEL4-202ENST00000524592 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.97■□□□□ 0.31
YPEL4-202ENST00000524592 RARSP54136 660 aaKnown RBP16.97■□□□□ 0.31
YPEL4-202ENST00000524592 TBC1D2Q9BYX2 928 aa16.97■□□□□ 0.31
YPEL4-202ENST00000524592 ABCA6Q8N139 1617 aa16.96■□□□□ 0.31
YPEL4-202ENST00000524592 CCDC146Q8IYE0 955 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms