RNA–Protein interactions for RNA: ENST00000523720.1

R3HCC1-209, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 5

Gene R3HCC1, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-209ENST00000523720 DIP2AQ14689 1571 aa17.88■□□□□ 0.45
R3HCC1-209ENST00000523720 RIMS2Q9UQ26 1411 aa17.88■□□□□ 0.45
R3HCC1-209ENST00000523720 TRPM2O94759 1503 aa17.88■□□□□ 0.45
R3HCC1-209ENST00000523720 KIF1BO60333 1816 aa17.87■□□□□ 0.45
R3HCC1-209ENST00000523720 NKTRP30414 1462 aaKnown RBP17.87■□□□□ 0.45
R3HCC1-209ENST00000523720 ALKQ9UM73 1620 aa17.86■□□□□ 0.45
R3HCC1-209ENST00000523720 TOM1O60784 492 aa17.85■□□□□ 0.45
R3HCC1-209ENST00000523720 CLTCL1P53675 1640 aa17.85■□□□□ 0.45
R3HCC1-209ENST00000523720 PLEKHG1Q9ULL1 1385 aa17.85■□□□□ 0.45
R3HCC1-209ENST00000523720 CHD2O14647 1828 aaKnown RBP17.84■□□□□ 0.45
R3HCC1-209ENST00000523720 PPP1R15AO75807 674 aaPredicted RBP17.84■□□□□ 0.45
R3HCC1-209ENST00000523720 HDGFP51858 240 aaKnown RBP17.83■□□□□ 0.44
R3HCC1-209ENST00000523720 SCAF1Q9H7N4 1312 aaKnown RBP17.82■□□□□ 0.44
R3HCC1-209ENST00000523720 CHGAP10645 457 aaKnown RBP17.82■□□□□ 0.44
R3HCC1-209ENST00000523720 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.8■□□□□ 0.44
R3HCC1-209ENST00000523720 BCANQ96GW7 911 aa17.8■□□□□ 0.44
R3HCC1-209ENST00000523720 PIP4K2BP78356 416 aa17.78■□□□□ 0.44
R3HCC1-209ENST00000523720 SLC26A8Q96RN1 970 aa17.78■□□□□ 0.44
R3HCC1-209ENST00000523720 SETBP1Q9Y6X0 1596 aa17.78■□□□□ 0.44
R3HCC1-209ENST00000523720 NRXN3Q9Y4C0 1643 aa17.77■□□□□ 0.44
R3HCC1-209ENST00000523720 KCNA6P17658 529 aa17.76■□□□□ 0.43
R3HCC1-209ENST00000523720 NEXMIFQ5QGS0 1516 aa17.76■□□□□ 0.43
R3HCC1-209ENST00000523720 TMEM94Q12767 1356 aa17.75■□□□□ 0.43
R3HCC1-209ENST00000523720 ADAMTS13Q76LX8 1427 aa17.74■□□□□ 0.43
R3HCC1-209ENST00000523720 TRIM52Q96A61 297 aa17.74■□□□□ 0.43
R3HCC1-209ENST00000523720 PIK3R4Q99570 1358 aa17.73■□□□□ 0.43
R3HCC1-209ENST00000523720 DISP3Q9P2K9 1392 aa17.73■□□□□ 0.43
R3HCC1-209ENST00000523720 XRN1Q8IZH2 1706 aaKnown RBP17.72■□□□□ 0.43
R3HCC1-209ENST00000523720 PPLO60437 1756 aa17.72■□□□□ 0.43
R3HCC1-209ENST00000523720 ROBO1Q9Y6N7 1651 aa17.71■□□□□ 0.43
R3HCC1-209ENST00000523720 MED1Q15648 1581 aaPredicted RBP17.7■□□□□ 0.42
R3HCC1-209ENST00000523720 MSH6P52701 1360 aa17.7■□□□□ 0.42
R3HCC1-209ENST00000523720 HSPA1LP34931 641 aa17.7■□□□□ 0.42
R3HCC1-209ENST00000523720 ZNF326Q5BKZ1 582 aaKnown RBP17.7■□□□□ 0.42
R3HCC1-209ENST00000523720 SLC4A1APQ9BWU0 796 aaKnown RBP17.7■□□□□ 0.42
R3HCC1-209ENST00000523720 TBX22Q9Y458 520 aa17.7■□□□□ 0.42
R3HCC1-209ENST00000523720 NUTM2DQ5VT03 806 aaPredicted RBP17.69■□□□□ 0.42
R3HCC1-209ENST00000523720 PROSER2Q86WR7 435 aaPredicted RBP17.69■□□□□ 0.42
R3HCC1-209ENST00000523720 SETD1AO15047 1707 aaKnown RBP17.67■□□□□ 0.42
R3HCC1-209ENST00000523720 IFT172Q9UG01 1749 aa17.67■□□□□ 0.42
R3HCC1-209ENST00000523720 NCOA3Q9Y6Q9 1424 aa17.66■□□□□ 0.42
R3HCC1-209ENST00000523720 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.66■□□□□ 0.42
R3HCC1-209ENST00000523720 ACIN1Q9UKV3 1341 aaKnown RBP17.66■□□□□ 0.42
R3HCC1-209ENST00000523720 CCDC144AA2RUR9 1427 aa17.64■□□□□ 0.42
R3HCC1-209ENST00000523720 FAM135BQ49AJ0 1406 aa17.64■□□□□ 0.41
R3HCC1-209ENST00000523720 SETD5Q9C0A6 1442 aa17.63■□□□□ 0.41
R3HCC1-209ENST00000523720 PHLPP1O60346 1717 aa17.62■□□□□ 0.41
R3HCC1-209ENST00000523720 RBM33Q96EV2 1170 aaKnown RBP17.61■□□□□ 0.41
R3HCC1-209ENST00000523720 PTPRUQ92729 1446 aa17.61■□□□□ 0.41
R3HCC1-209ENST00000523720 NALCNQ8IZF0 1738 aa17.61■□□□□ 0.41
R3HCC1-209ENST00000523720 DCCP43146 1447 aa17.59■□□□□ 0.41
R3HCC1-209ENST00000523720 C14orf37Q86TY3 774 aa17.59■□□□□ 0.41
R3HCC1-209ENST00000523720 RPGRIP1LQ68CZ1 1315 aa17.58■□□□□ 0.4
R3HCC1-209ENST00000523720 MPHOSPH9Q99550 1183 aa17.57■□□□□ 0.4
R3HCC1-209ENST00000523720 AMOTL2Q9Y2J4 779 aa17.57■□□□□ 0.4
R3HCC1-209ENST00000523720 METP08581 1390 aa17.56■□□□□ 0.4
R3HCC1-209ENST00000523720 RAB3GAP2Q9H2M9 1393 aa17.56■□□□□ 0.4
R3HCC1-209ENST00000523720 PTCH1Q13635 1447 aa17.55■□□□□ 0.4
R3HCC1-209ENST00000523720 VGFO15240 615 aaPredicted RBP17.55■□□□□ 0.4
R3HCC1-209ENST00000523720 FOXD1Q16676 465 aa17.55■□□□□ 0.4
R3HCC1-209ENST00000523720 SPATA31E1Q6ZUB1 1445 aa17.55■□□□□ 0.4
R3HCC1-209ENST00000523720 PRAG1Q86YV5 1406 aa17.55■□□□□ 0.4
R3HCC1-209ENST00000523720 COL16A1Q07092 1604 aaPredicted RBP17.54■□□□□ 0.4
R3HCC1-209ENST00000523720 AHDC1Q5TGY3 1603 aaPredicted RBP17.54■□□□□ 0.4
R3HCC1-209ENST00000523720 LAMC1P11047 1609 aa17.54■□□□□ 0.4
R3HCC1-209ENST00000523720 KNDC1Q76NI1 1749 aa17.53■□□□□ 0.4
R3HCC1-209ENST00000523720 CADPS2Q86UW7 1296 aa17.53■□□□□ 0.4
R3HCC1-209ENST00000523720 ADGRL3Q9HAR2 1447 aa17.53■□□□□ 0.4
R3HCC1-209ENST00000523720 ATF3P18847 181 aa17.52■□□□□ 0.4
R3HCC1-209ENST00000523720 C19orf44Q9H6X5 657 aa17.52■□□□□ 0.4
R3HCC1-209ENST00000523720 SLAIN2Q9P270 581 aa17.52■□□□□ 0.4
R3HCC1-209ENST00000523720 ANKRD30BQ9BXX2 1392 aa17.52■□□□□ 0.39
R3HCC1-209ENST00000523720 NHSL1Q5SYE7 1610 aa17.5■□□□□ 0.39
R3HCC1-209ENST00000523720 SHPRHQ149N8 1683 aa17.5■□□□□ 0.39
R3HCC1-209ENST00000523720 ASXL1Q8IXJ9 1541 aa17.49■□□□□ 0.39
R3HCC1-209ENST00000523720 ILDR2Q71H61 639 aa17.49■□□□□ 0.39
R3HCC1-209ENST00000523720 MYOM2P54296 1465 aa17.48■□□□□ 0.39
R3HCC1-209ENST00000523720 PIK3C2GO75747 1445 aa17.47■□□□□ 0.39
R3HCC1-209ENST00000523720 MST1RQ04912 1400 aa17.47■□□□□ 0.39
R3HCC1-209ENST00000523720 CDC42BPGQ6DT37 1551 aa17.46■□□□□ 0.39
R3HCC1-209ENST00000523720 ROBO2Q9HCK4 1378 aa17.44■□□□□ 0.38
R3HCC1-209ENST00000523720 JCADQ9P266 1359 aa17.44■□□□□ 0.38
R3HCC1-209ENST00000523720 RGL3Q3MIN7 710 aa17.44■□□□□ 0.38
R3HCC1-209ENST00000523720 TECPR2O15040 1411 aa17.43■□□□□ 0.38
R3HCC1-209ENST00000523720 ADGRF5Q8IZF2 1346 aa17.43■□□□□ 0.38
R3HCC1-209ENST00000523720 NRXN1Q9ULB1 1477 aa17.43■□□□□ 0.38
R3HCC1-209ENST00000523720 SOCS7O14512 581 aa17.4■□□□□ 0.38
R3HCC1-209ENST00000523720 HRCP23327 699 aa17.39■□□□□ 0.37
R3HCC1-209ENST00000523720 BRINP3Q76B58 766 aa17.39■□□□□ 0.37
R3HCC1-209ENST00000523720 LRPPRCP42704 1394 aaKnown RBP17.39■□□□□ 0.37
R3HCC1-209ENST00000523720 C1orf167Q5SNV9 1468 aa17.37■□□□□ 0.37
R3HCC1-209ENST00000523720 FMN2Q9NZ56 1722 aa17.37■□□□□ 0.37
R3HCC1-209ENST00000523720 YTHDC2Q9H6S0 1430 aaKnown RBP17.37■□□□□ 0.37
R3HCC1-209ENST00000523720 SPATA31A6Q5VVP1 1343 aa17.36■□□□□ 0.37
R3HCC1-209ENST00000523720 LRP6O75581 1613 aa17.35■□□□□ 0.37
R3HCC1-209ENST00000523720 KIF1AQ12756 1690 aa17.35■□□□□ 0.37
R3HCC1-209ENST00000523720 ABCC11Q96J66 1382 aa17.34■□□□□ 0.37
R3HCC1-209ENST00000523720 DLC1Q96QB1 1528 aa17.32■□□□□ 0.36
R3HCC1-209ENST00000523720 STK26Q9P289 416 aa17.31■□□□□ 0.36
R3HCC1-209ENST00000523720 ADGRB1O14514 1584 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms