RNA–Protein interactions for RNA: ENST00000522926.1

TNIP1-216, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 3

Gene TNIP1, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-216ENST00000522926 ADGRL2O95490 1459 aa28.68■■■□□ 2.18
TNIP1-216ENST00000522926 APLP2Q06481 763 aa28.68■■■□□ 2.18
TNIP1-216ENST00000522926 BCANQ96GW7 911 aa28.68■■■□□ 2.18
TNIP1-216ENST00000522926 SLAIN2Q9P270 581 aa28.67■■■□□ 2.18
TNIP1-216ENST00000522926 MSH6P52701 1360 aa28.66■■■□□ 2.18
TNIP1-216ENST00000522926 PLEKHG1Q9ULL1 1385 aa28.63■■■□□ 2.17
TNIP1-216ENST00000522926 MYO5BQ9ULV0 1848 aa28.62■■■□□ 2.17
TNIP1-216ENST00000522926 RIMS2Q9UQ26 1411 aa28.62■■■□□ 2.17
TNIP1-216ENST00000522926 ANKRD50Q9ULJ7 1429 aa28.61■■■□□ 2.17
TNIP1-216ENST00000522926 RPRD2Q5VT52 1461 aaKnown RBP28.61■■■□□ 2.17
TNIP1-216ENST00000522926 PHLPP1O60346 1717 aa28.61■■■□□ 2.17
TNIP1-216ENST00000522926 SETD1AO15047 1707 aaKnown RBP28.59■■■□□ 2.17
TNIP1-216ENST00000522926 CHD2O14647 1828 aaKnown RBP28.59■■■□□ 2.17
TNIP1-216ENST00000522926 JCADQ9P266 1359 aa28.59■■■□□ 2.17
TNIP1-216ENST00000522926 TMEM131LA2VDJ0 1609 aa28.58■■■□□ 2.17
TNIP1-216ENST00000522926 GCC2Q8IWJ2 1684 aa28.58■■■□□ 2.16
TNIP1-216ENST00000522926 FAM50AQ14320 339 aaKnown RBP28.57■■■□□ 2.16
TNIP1-216ENST00000522926 PPP1R15AO75807 674 aaPredicted RBP28.56■■■□□ 2.16
TNIP1-216ENST00000522926 COL16A1Q07092 1604 aaPredicted RBP28.56■■■□□ 2.16
TNIP1-216ENST00000522926 NUTM2DQ5VT03 806 aaPredicted RBP28.55■■■□□ 2.16
TNIP1-216ENST00000522926 TBX22Q9Y458 520 aa28.54■■■□□ 2.16
TNIP1-216ENST00000522926 LRP6O75581 1613 aa28.54■■■□□ 2.16
TNIP1-216ENST00000522926 ADAMTS13Q76LX8 1427 aa28.53■■■□□ 2.16
TNIP1-216ENST00000522926 CHGAP10645 457 aaKnown RBP28.5■■■□□ 2.15
TNIP1-216ENST00000522926 NCOA3Q9Y6Q9 1424 aa28.47■■■□□ 2.15
TNIP1-216ENST00000522926 HDGFP51858 240 aaKnown RBP28.47■■■□□ 2.15
TNIP1-216ENST00000522926 C14orf37Q86TY3 774 aa28.46■■■□□ 2.15
TNIP1-216ENST00000522926 UNC13BO14795 1591 aa28.45■■■□□ 2.15
TNIP1-216ENST00000522926 E9PCH4 1651 aa28.45■■■□□ 2.14
TNIP1-216ENST00000522926 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.44■■■□□ 2.14
TNIP1-216ENST00000522926 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.44■■■□□ 2.14
TNIP1-216ENST00000522926 PTPRUQ92729 1446 aa28.43■■■□□ 2.14
TNIP1-216ENST00000522926 C19orf44Q9H6X5 657 aa28.42■■■□□ 2.14
TNIP1-216ENST00000522926 AHDC1Q5TGY3 1603 aaPredicted RBP28.42■■■□□ 2.14
TNIP1-216ENST00000522926 SPATA31A6Q5VVP1 1343 aa28.42■■■□□ 2.14
TNIP1-216ENST00000522926 CADPS2Q86UW7 1296 aa28.4■■■□□ 2.14
TNIP1-216ENST00000522926 DIP2AQ14689 1571 aa28.39■■■□□ 2.14
TNIP1-216ENST00000522926 PIK3R4Q99570 1358 aa28.38■■■□□ 2.13
TNIP1-216ENST00000522926 ATF3P18847 181 aa28.38■■■□□ 2.13
TNIP1-216ENST00000522926 MEX3CQ5U5Q3 659 aaKnown RBP28.38■■■□□ 2.13
TNIP1-216ENST00000522926 BRINP3Q76B58 766 aa28.37■■■□□ 2.13
TNIP1-216ENST00000522926 AMOTL2Q9Y2J4 779 aa28.37■■■□□ 2.13
TNIP1-216ENST00000522926 TRIM52Q96A61 297 aa28.36■■■□□ 2.13
TNIP1-216ENST00000522926 UPF1Q92900 1129 aaKnown RBP eCLIP28.35■■■□□ 2.13
TNIP1-216ENST00000522926 SHPRHQ149N8 1683 aa28.35■■■□□ 2.13
TNIP1-216ENST00000522926 IQGAP3Q86VI3 1631 aa28.34■■■□□ 2.13
TNIP1-216ENST00000522926 ZNF772Q68DY9 489 aaPredicted RBP28.33■■■□□ 2.13
TNIP1-216ENST00000522926 TRPM2O94759 1503 aa28.33■■■□□ 2.13
TNIP1-216ENST00000522926 ROCK1Q13464 1354 aa28.31■■■□□ 2.12
TNIP1-216ENST00000522926 NUP155O75694 1391 aa28.3■■■□□ 2.12
TNIP1-216ENST00000522926 NRXN3Q9Y4C0 1643 aa28.29■■■□□ 2.12
TNIP1-216ENST00000522926 SRCAPQ6ZRS2 3230 aa28.29■■■□□ 2.12
TNIP1-216ENST00000522926 NUTM2BA6NNL0 878 aaPredicted RBP28.29■■■□□ 2.12
TNIP1-216ENST00000522926 NUTM2EB1AL46 878 aaPredicted RBP28.29■■■□□ 2.12
TNIP1-216ENST00000522926 NUTM2AQ8IVF1 878 aaPredicted RBP28.29■■■□□ 2.12
TNIP1-216ENST00000522926 ASXL1Q8IXJ9 1541 aa28.27■■■□□ 2.12
TNIP1-216ENST00000522926 XRN1Q8IZH2 1706 aaKnown RBP28.26■■■□□ 2.11
TNIP1-216ENST00000522926 DCCP43146 1447 aa28.25■■■□□ 2.11
TNIP1-216ENST00000522926 MST1RQ04912 1400 aa28.25■■■□□ 2.11
TNIP1-216ENST00000522926 RXRBP28702 533 aa28.24■■■□□ 2.11
TNIP1-216ENST00000522926 METP08581 1390 aa28.24■■■□□ 2.11
TNIP1-216ENST00000522926 DDX17Q92841 729 aaKnown RBP28.22■■■□□ 2.11
TNIP1-216ENST00000522926 SETD5Q9C0A6 1442 aa28.22■■■□□ 2.11
TNIP1-216ENST00000522926 SETBP1Q9Y6X0 1596 aa28.22■■■□□ 2.11
TNIP1-216ENST00000522926 AFF2P51816 1311 aa28.21■■■□□ 2.11
TNIP1-216ENST00000522926 ITGAEP38570 1179 aa28.21■■■□□ 2.11
TNIP1-216ENST00000522926 NHSL1Q5SYE7 1610 aa28.18■■■□□ 2.1
TNIP1-216ENST00000522926 CDK12Q9NYV4 1490 aaPredicted RBP28.16■■■□□ 2.1
TNIP1-216ENST00000522926 ZNF326Q5BKZ1 582 aaKnown RBP28.15■■■□□ 2.1
TNIP1-216ENST00000522926 PNPLA6Q8IY17 1366 aa28.13■■■□□ 2.09
TNIP1-216ENST00000522926 SPHKAPQ2M3C7 1700 aa28.13■■■□□ 2.09
TNIP1-216ENST00000522926 ADGRL3Q9HAR2 1447 aa28.13■■■□□ 2.09
TNIP1-216ENST00000522926 LRRC59Q96AG4 307 aaKnown RBP28.12■■■□□ 2.09
TNIP1-216ENST00000522926 C8orf37Q96NL8 207 aa28.12■■■□□ 2.09
TNIP1-216ENST00000522926 RGS12O14924 1447 aa28.1■■■□□ 2.09
TNIP1-216ENST00000522926 NALCNQ8IZF0 1738 aa28.09■■■□□ 2.09
TNIP1-216ENST00000522926 NEXMIFQ5QGS0 1516 aa28.09■■■□□ 2.09
TNIP1-216ENST00000522926 PPARGC1BQ86YN6 1023 aaKnown RBP28.08■■■□□ 2.09
TNIP1-216ENST00000522926 CLTCL1P53675 1640 aa28.07■■■□□ 2.08
TNIP1-216ENST00000522926 QTRT2Q9H974 415 aaKnown RBP28.07■■■□□ 2.08
TNIP1-216ENST00000522926 C1orf167Q5SNV9 1468 aa28.05■■■□□ 2.08
TNIP1-216ENST00000522926 RBM6P78332 1123 aaKnown RBP28.03■■■□□ 2.08
TNIP1-216ENST00000522926 ADAMTS2O95450 1211 aa28.02■■■□□ 2.08
TNIP1-216ENST00000522926 ORAI2Q96SN7 254 aa28■■■□□ 2.07
TNIP1-216ENST00000522926 ROBO2Q9HCK4 1378 aa27.99■■■□□ 2.07
TNIP1-216ENST00000522926 EP400Q96L91 3159 aa27.99■■■□□ 2.07
TNIP1-216ENST00000522926 NGLY1Q96IV0 654 aa27.97■■■□□ 2.07
TNIP1-216ENST00000522926 PTCH1Q13635 1447 aa27.96■■■□□ 2.07
TNIP1-216ENST00000522926 LAMC1P11047 1609 aa27.96■■■□□ 2.07
TNIP1-216ENST00000522926 SOS2Q07890 1332 aaPredicted RBP27.95■■■□□ 2.07
TNIP1-216ENST00000522926 NAIPQ13075 1403 aa27.9■■■□□ 2.06
TNIP1-216ENST00000522926 USP21Q9UK80 565 aa27.89■■■□□ 2.06
TNIP1-216ENST00000522926 KIF1BO60333 1816 aa27.89■■■□□ 2.06
TNIP1-216ENST00000522926 PRAG1Q86YV5 1406 aa27.87■■■□□ 2.05
TNIP1-216ENST00000522926 VGFO15240 615 aaPredicted RBP27.86■■■□□ 2.05
TNIP1-216ENST00000522926 FNBP4Q8N3X1 1017 aaPredicted RBP27.86■■■□□ 2.05
TNIP1-216ENST00000522926 ATRNO75882 1429 aa27.84■■■□□ 2.05
TNIP1-216ENST00000522926 TRPC5Q9UL62 973 aaPredicted RBP27.83■■■□□ 2.05
TNIP1-216ENST00000522926 ATAD2Q6PL18 1390 aa27.83■■■□□ 2.05
TNIP1-216ENST00000522926 MYOM2P54296 1465 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms