RNA–Protein interactions for RNA: ENST00000522468.1

HMBOX1-209, Transcript of homeobox containing 1, humanhuman

TSL 3

Gene HMBOX1, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-209ENST00000522468 KCNA6P17658 529 aa21.69■■□□□ 1.06
HMBOX1-209ENST00000522468 SLC26A8Q96RN1 970 aa21.69■■□□□ 1.06
HMBOX1-209ENST00000522468 TMEM94Q12767 1356 aa21.68■■□□□ 1.06
HMBOX1-209ENST00000522468 NKTRP30414 1462 aaKnown RBP21.68■■□□□ 1.06
HMBOX1-209ENST00000522468 CHD2O14647 1828 aaKnown RBP21.67■■□□□ 1.06
HMBOX1-209ENST00000522468 PLEKHG1Q9ULL1 1385 aa21.66■■□□□ 1.06
HMBOX1-209ENST00000522468 RIMS2Q9UQ26 1411 aa21.65■■□□□ 1.06
HMBOX1-209ENST00000522468 FAM135BQ49AJ0 1406 aa21.63■■□□□ 1.05
HMBOX1-209ENST00000522468 NUP155O75694 1391 aa21.61■■□□□ 1.05
HMBOX1-209ENST00000522468 ROBO1Q9Y6N7 1651 aa21.6■■□□□ 1.05
HMBOX1-209ENST00000522468 PROSER2Q86WR7 435 aaPredicted RBP21.59■■□□□ 1.05
HMBOX1-209ENST00000522468 PPARGC1BQ86YN6 1023 aaKnown RBP21.59■■□□□ 1.05
HMBOX1-209ENST00000522468 ADAMTS13Q76LX8 1427 aa21.58■■□□□ 1.05
HMBOX1-209ENST00000522468 RRBP1Q9P2E9 1410 aaKnown RBP21.57■■□□□ 1.04
HMBOX1-209ENST00000522468 RBM33Q96EV2 1170 aaKnown RBP21.57■■□□□ 1.04
HMBOX1-209ENST00000522468 SPHKAPQ2M3C7 1700 aa21.57■■□□□ 1.04
HMBOX1-209ENST00000522468 DIP2AQ14689 1571 aa21.57■■□□□ 1.04
HMBOX1-209ENST00000522468 ITGAEP38570 1179 aa21.56■■□□□ 1.04
HMBOX1-209ENST00000522468 HDGFP51858 240 aaKnown RBP21.56■■□□□ 1.04
HMBOX1-209ENST00000522468 SENP3Q9H4L4 574 aaPredicted RBP21.56■■□□□ 1.04
HMBOX1-209ENST00000522468 TBX22Q9Y458 520 aa21.56■■□□□ 1.04
HMBOX1-209ENST00000522468 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.54■■□□□ 1.04
HMBOX1-209ENST00000522468 PPP1R15AO75807 674 aaPredicted RBP21.53■■□□□ 1.04
HMBOX1-209ENST00000522468 BCANQ96GW7 911 aa21.53■■□□□ 1.04
HMBOX1-209ENST00000522468 NRXN3Q9Y4C0 1643 aa21.51■■□□□ 1.03
HMBOX1-209ENST00000522468 CHGAP10645 457 aaKnown RBP21.51■■□□□ 1.03
HMBOX1-209ENST00000522468 NCOA3Q9Y6Q9 1424 aa21.51■■□□□ 1.03
HMBOX1-209ENST00000522468 MSH6P52701 1360 aa21.5■■□□□ 1.03
HMBOX1-209ENST00000522468 PIK3R4Q99570 1358 aa21.5■■□□□ 1.03
HMBOX1-209ENST00000522468 NAIPQ13075 1403 aa21.49■■□□□ 1.03
HMBOX1-209ENST00000522468 NUTM2DQ5VT03 806 aaPredicted RBP21.49■■□□□ 1.03
HMBOX1-209ENST00000522468 SETBP1Q9Y6X0 1596 aa21.48■■□□□ 1.03
HMBOX1-209ENST00000522468 TRPM2O94759 1503 aa21.47■■□□□ 1.03
HMBOX1-209ENST00000522468 PHF23Q9BUL5 403 aaPredicted RBP21.47■■□□□ 1.03
HMBOX1-209ENST00000522468 CLTCL1P53675 1640 aa21.47■■□□□ 1.03
HMBOX1-209ENST00000522468 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.46■■□□□ 1.03
HMBOX1-209ENST00000522468 SLAIN2Q9P270 581 aa21.46■■□□□ 1.03
HMBOX1-209ENST00000522468 RGS17Q9UGC6 210 aaPredicted RBP21.46■■□□□ 1.03
HMBOX1-209ENST00000522468 XRN1Q8IZH2 1706 aaKnown RBP21.46■■□□□ 1.03
HMBOX1-209ENST00000522468 PTPRUQ92729 1446 aa21.46■■□□□ 1.03
HMBOX1-209ENST00000522468 PHLPP1O60346 1717 aa21.44■■□□□ 1.02
HMBOX1-209ENST00000522468 COL16A1Q07092 1604 aaPredicted RBP21.43■■□□□ 1.02
HMBOX1-209ENST00000522468 NEXMIFQ5QGS0 1516 aa21.42■■□□□ 1.02
HMBOX1-209ENST00000522468 KIF1BO60333 1816 aa21.4■■□□□ 1.02
HMBOX1-209ENST00000522468 HFM1A2PYH4 1435 aa21.39■■□□□ 1.02
HMBOX1-209ENST00000522468 C19orf44Q9H6X5 657 aa21.38■■□□□ 1.01
HMBOX1-209ENST00000522468 AMOTL2Q9Y2J4 779 aa21.38■■□□□ 1.01
HMBOX1-209ENST00000522468 AHDC1Q5TGY3 1603 aaPredicted RBP21.37■■□□□ 1.01
HMBOX1-209ENST00000522468 METP08581 1390 aa21.36■■□□□ 1.01
HMBOX1-209ENST00000522468 CADPS2Q86UW7 1296 aa21.35■■□□□ 1.01
HMBOX1-209ENST00000522468 SETD1AO15047 1707 aaKnown RBP21.35■■□□□ 1.01
HMBOX1-209ENST00000522468 JCADQ9P266 1359 aa21.35■■□□□ 1.01
HMBOX1-209ENST00000522468 DCCP43146 1447 aa21.34■■□□□ 1.01
HMBOX1-209ENST00000522468 ZNF326Q5BKZ1 582 aaKnown RBP21.32■■□□□ 1
HMBOX1-209ENST00000522468 C14orf37Q86TY3 774 aa21.32■■□□□ 1
HMBOX1-209ENST00000522468 SHPRHQ149N8 1683 aa21.31■■□□□ 1
HMBOX1-209ENST00000522468 ATF3P18847 181 aa21.3■■□□□ 1
HMBOX1-209ENST00000522468 POTEAQ6S8J7 498 aa21.3■■□□□ 1
HMBOX1-209ENST00000522468 NALCNQ8IZF0 1738 aa21.29■■□□□ 1
HMBOX1-209ENST00000522468 LRP6O75581 1613 aa21.28■■□□□ 1
HMBOX1-209ENST00000522468 MST1RQ04912 1400 aa21.28■■□□□ 1
HMBOX1-209ENST00000522468 PPLO60437 1756 aa21.28■■□□□ 1
HMBOX1-209ENST00000522468 NHSL1Q5SYE7 1610 aa21.27■■□□□ 1
HMBOX1-209ENST00000522468 BRINP3Q76B58 766 aa21.27■■□□□ 1
HMBOX1-209ENST00000522468 ASXL1Q8IXJ9 1541 aa21.26■□□□□ 0.99
HMBOX1-209ENST00000522468 ADGRL3Q9HAR2 1447 aa21.26■□□□□ 0.99
HMBOX1-209ENST00000522468 PRAG1Q86YV5 1406 aa21.25■□□□□ 0.99
HMBOX1-209ENST00000522468 SPATA31A6Q5VVP1 1343 aa21.24■□□□□ 0.99
HMBOX1-209ENST00000522468 TRIM52Q96A61 297 aa21.23■□□□□ 0.99
HMBOX1-209ENST00000522468 SLC4A1APQ9BWU0 796 aaKnown RBP21.23■□□□□ 0.99
HMBOX1-209ENST00000522468 PTCH1Q13635 1447 aa21.22■□□□□ 0.99
HMBOX1-209ENST00000522468 RPGRIP1LQ68CZ1 1315 aa21.21■□□□□ 0.99
HMBOX1-209ENST00000522468 VGFO15240 615 aaPredicted RBP21.2■□□□□ 0.98
HMBOX1-209ENST00000522468 SETD5Q9C0A6 1442 aa21.2■□□□□ 0.98
HMBOX1-209ENST00000522468 LAMC1P11047 1609 aa21.18■□□□□ 0.98
HMBOX1-209ENST00000522468 ROBO2Q9HCK4 1378 aa21.18■□□□□ 0.98
HMBOX1-209ENST00000522468 IFT172Q9UG01 1749 aa21.18■□□□□ 0.98
HMBOX1-209ENST00000522468 SPATA31E1Q6ZUB1 1445 aa21.16■□□□□ 0.98
HMBOX1-209ENST00000522468 FOXD1Q16676 465 aa21.15■□□□□ 0.98
HMBOX1-209ENST00000522468 C1orf167Q5SNV9 1468 aa21.13■□□□□ 0.97
HMBOX1-209ENST00000522468 CCDC144AA2RUR9 1427 aa21.11■□□□□ 0.97
HMBOX1-209ENST00000522468 DDX17Q92841 729 aaKnown RBP21.09■□□□□ 0.97
HMBOX1-209ENST00000522468 MPHOSPH9Q99550 1183 aa21.09■□□□□ 0.97
HMBOX1-209ENST00000522468 ADGRF5Q8IZF2 1346 aa21.08■□□□□ 0.97
HMBOX1-209ENST00000522468 LRRC59Q96AG4 307 aaKnown RBP21.08■□□□□ 0.97
HMBOX1-209ENST00000522468 PNPLA6Q8IY17 1366 aa21.08■□□□□ 0.96
HMBOX1-209ENST00000522468 CDC42BPGQ6DT37 1551 aa21.07■□□□□ 0.96
HMBOX1-209ENST00000522468 TECPR2O15040 1411 aa21.07■□□□□ 0.96
HMBOX1-209ENST00000522468 MEX3CQ5U5Q3 659 aaKnown RBP21.07■□□□□ 0.96
HMBOX1-209ENST00000522468 ZNF772Q68DY9 489 aaPredicted RBP21.07■□□□□ 0.96
HMBOX1-209ENST00000522468 KNDC1Q76NI1 1749 aa21.06■□□□□ 0.96
HMBOX1-209ENST00000522468 ANKRD30BQ9BXX2 1392 aa21.05■□□□□ 0.96
HMBOX1-209ENST00000522468 SOS2Q07890 1332 aaPredicted RBP21.04■□□□□ 0.96
HMBOX1-209ENST00000522468 PIK3C2GO75747 1445 aa21.04■□□□□ 0.96
HMBOX1-209ENST00000522468 ORAI2Q96SN7 254 aa21.04■□□□□ 0.96
HMBOX1-209ENST00000522468 NUTM2BA6NNL0 878 aaPredicted RBP21.03■□□□□ 0.96
HMBOX1-209ENST00000522468 NUTM2EB1AL46 878 aaPredicted RBP21.03■□□□□ 0.96
HMBOX1-209ENST00000522468 NUTM2AQ8IVF1 878 aaPredicted RBP21.03■□□□□ 0.96
HMBOX1-209ENST00000522468 LRPPRCP42704 1394 aaKnown RBP21.01■□□□□ 0.95
HMBOX1-209ENST00000522468 RGL3Q3MIN7 710 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms