RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 BCANQ96GW7 911 aa31.46■■■□□ 2.63
SDCBP-209ENST00000522243 HSPA1LP34931 641 aa31.43■■■□□ 2.62
SDCBP-209ENST00000522243 XIRP1Q702N8 1843 aaKnown RBP31.42■■■□□ 2.62
SDCBP-209ENST00000522243 RIMS2Q9UQ26 1411 aa31.42■■■□□ 2.62
SDCBP-209ENST00000522243 ZFYVE9O95405 1425 aa31.41■■■□□ 2.62
SDCBP-209ENST00000522243 PPP1R15AO75807 674 aaPredicted RBP31.39■■■□□ 2.62
SDCBP-209ENST00000522243 KCNA6P17658 529 aa31.38■■■□□ 2.61
SDCBP-209ENST00000522243 HDGFP51858 240 aaKnown RBP31.37■■■□□ 2.61
SDCBP-209ENST00000522243 NUTM2DQ5VT03 806 aaPredicted RBP31.37■■■□□ 2.61
SDCBP-209ENST00000522243 NAIPQ13075 1403 aa31.37■■■□□ 2.61
SDCBP-209ENST00000522243 PLEKHG1Q9ULL1 1385 aa31.34■■■□□ 2.61
SDCBP-209ENST00000522243 SPHKAPQ2M3C7 1700 aa31.33■■■□□ 2.61
SDCBP-209ENST00000522243 RBM33Q96EV2 1170 aaKnown RBP31.33■■■□□ 2.61
SDCBP-209ENST00000522243 TMEM94Q12767 1356 aa31.31■■■□□ 2.6
SDCBP-209ENST00000522243 PROSER2Q86WR7 435 aaPredicted RBP31.31■■■□□ 2.6
SDCBP-209ENST00000522243 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.31■■■□□ 2.6
SDCBP-209ENST00000522243 ILDR2Q71H61 639 aa31.3■■■□□ 2.6
SDCBP-209ENST00000522243 NWD1Q149M9 1564 aa31.29■■■□□ 2.6
SDCBP-209ENST00000522243 CHD2O14647 1828 aaKnown RBP31.26■■■□□ 2.59
SDCBP-209ENST00000522243 TRIM52Q96A61 297 aa31.25■■■□□ 2.59
SDCBP-209ENST00000522243 HFM1A2PYH4 1435 aa31.24■■■□□ 2.59
SDCBP-209ENST00000522243 NKTRP30414 1462 aaKnown RBP31.23■■■□□ 2.59
SDCBP-209ENST00000522243 TBX22Q9Y458 520 aa31.23■■■□□ 2.59
SDCBP-209ENST00000522243 ADAMTS13Q76LX8 1427 aa31.21■■■□□ 2.59
SDCBP-209ENST00000522243 ZNF326Q5BKZ1 582 aaKnown RBP31.19■■■□□ 2.58
SDCBP-209ENST00000522243 CLTCL1P53675 1640 aa31.19■■■□□ 2.58
SDCBP-209ENST00000522243 MED1Q15648 1581 aaPredicted RBP31.16■■■□□ 2.58
SDCBP-209ENST00000522243 TRPM2O94759 1503 aa31.15■■■□□ 2.58
SDCBP-209ENST00000522243 DIP2AQ14689 1571 aa31.14■■■□□ 2.58
SDCBP-209ENST00000522243 SLC4A1APQ9BWU0 796 aaKnown RBP31.12■■■□□ 2.57
SDCBP-209ENST00000522243 MSH6P52701 1360 aa31.12■■■□□ 2.57
SDCBP-209ENST00000522243 KIF1BO60333 1816 aa31.12■■■□□ 2.57
SDCBP-209ENST00000522243 FAM135BQ49AJ0 1406 aa31.09■■■□□ 2.57
SDCBP-209ENST00000522243 NRXN3Q9Y4C0 1643 aa31.09■■■□□ 2.57
SDCBP-209ENST00000522243 ROBO1Q9Y6N7 1651 aa31.08■■■□□ 2.57
SDCBP-209ENST00000522243 PIK3R4Q99570 1358 aa31.07■■■□□ 2.56
SDCBP-209ENST00000522243 C14orf37Q86TY3 774 aa31.06■■■□□ 2.56
SDCBP-209ENST00000522243 PTPRUQ92729 1446 aa31.06■■■□□ 2.56
SDCBP-209ENST00000522243 NEXMIFQ5QGS0 1516 aa31.05■■■□□ 2.56
SDCBP-209ENST00000522243 AMOTL2Q9Y2J4 779 aa31.05■■■□□ 2.56
SDCBP-209ENST00000522243 SETBP1Q9Y6X0 1596 aa31.04■■■□□ 2.56
SDCBP-209ENST00000522243 FOXD1Q16676 465 aa31.02■■■□□ 2.56
SDCBP-209ENST00000522243 SLAIN2Q9P270 581 aa31.01■■■□□ 2.55
SDCBP-209ENST00000522243 NCOA3Q9Y6Q9 1424 aa30.98■■■□□ 2.55
SDCBP-209ENST00000522243 SOCS7O14512 581 aa30.98■■■□□ 2.55
SDCBP-209ENST00000522243 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.98■■■□□ 2.55
SDCBP-209ENST00000522243 METP08581 1390 aa30.97■■■□□ 2.55
SDCBP-209ENST00000522243 PHF23Q9BUL5 403 aaPredicted RBP30.97■■■□□ 2.55
SDCBP-209ENST00000522243 XRN1Q8IZH2 1706 aaKnown RBP30.95■■■□□ 2.55
SDCBP-209ENST00000522243 C19orf44Q9H6X5 657 aa30.93■■■□□ 2.54
SDCBP-209ENST00000522243 MPHOSPH9Q99550 1183 aa30.91■■■□□ 2.54
SDCBP-209ENST00000522243 PHLPP1O60346 1717 aa30.9■■■□□ 2.54
SDCBP-209ENST00000522243 ATF3P18847 181 aa30.9■■■□□ 2.54
SDCBP-209ENST00000522243 VGFO15240 615 aaPredicted RBP30.89■■■□□ 2.54
SDCBP-209ENST00000522243 CADPS2Q86UW7 1296 aa30.89■■■□□ 2.54
SDCBP-209ENST00000522243 PPLO60437 1756 aa30.87■■■□□ 2.53
SDCBP-209ENST00000522243 RPGRIP1LQ68CZ1 1315 aa30.86■■■□□ 2.53
SDCBP-209ENST00000522243 SETD5Q9C0A6 1442 aa30.84■■■□□ 2.53
SDCBP-209ENST00000522243 SETD1AO15047 1707 aaKnown RBP30.84■■■□□ 2.53
SDCBP-209ENST00000522243 CCDC144AA2RUR9 1427 aa30.83■■■□□ 2.53
SDCBP-209ENST00000522243 RGL3Q3MIN7 710 aa30.81■■■□□ 2.52
SDCBP-209ENST00000522243 COL16A1Q07092 1604 aaPredicted RBP30.78■■■□□ 2.52
SDCBP-209ENST00000522243 NALCNQ8IZF0 1738 aa30.76■■■□□ 2.52
SDCBP-209ENST00000522243 DCCP43146 1447 aa30.76■■■□□ 2.51
SDCBP-209ENST00000522243 BRINP3Q76B58 766 aa30.75■■■□□ 2.51
SDCBP-209ENST00000522243 RGS17Q9UGC6 210 aaPredicted RBP30.75■■■□□ 2.51
SDCBP-209ENST00000522243 JCADQ9P266 1359 aa30.75■■■□□ 2.51
SDCBP-209ENST00000522243 SPATA31E1Q6ZUB1 1445 aa30.74■■■□□ 2.51
SDCBP-209ENST00000522243 ADGRL3Q9HAR2 1447 aa30.74■■■□□ 2.51
SDCBP-209ENST00000522243 RAB3GAP2Q9H2M9 1393 aa30.74■■■□□ 2.51
SDCBP-209ENST00000522243 ADGRF5Q8IZF2 1346 aa30.73■■■□□ 2.51
SDCBP-209ENST00000522243 AHDC1Q5TGY3 1603 aaPredicted RBP30.73■■■□□ 2.51
SDCBP-209ENST00000522243 MST1RQ04912 1400 aa30.73■■■□□ 2.51
SDCBP-209ENST00000522243 IFT172Q9UG01 1749 aa30.71■■■□□ 2.51
SDCBP-209ENST00000522243 ACIN1Q9UKV3 1341 aaKnown RBP30.71■■■□□ 2.51
SDCBP-209ENST00000522243 ROBO2Q9HCK4 1378 aa30.7■■■□□ 2.51
SDCBP-209ENST00000522243 PTCH1Q13635 1447 aa30.69■■■□□ 2.5
SDCBP-209ENST00000522243 ASXL1Q8IXJ9 1541 aa30.68■■■□□ 2.5
SDCBP-209ENST00000522243 ANKRD30BQ9BXX2 1392 aa30.66■■■□□ 2.5
SDCBP-209ENST00000522243 DDX17Q92841 729 aaKnown RBP30.61■■■□□ 2.49
SDCBP-209ENST00000522243 PRAG1Q86YV5 1406 aa30.61■■■□□ 2.49
SDCBP-209ENST00000522243 NHSL1Q5SYE7 1610 aa30.61■■■□□ 2.49
SDCBP-209ENST00000522243 SHPRHQ149N8 1683 aa30.6■■■□□ 2.49
SDCBP-209ENST00000522243 POTEAQ6S8J7 498 aa30.6■■■□□ 2.49
SDCBP-209ENST00000522243 STK26Q9P289 416 aa30.6■■■□□ 2.49
SDCBP-209ENST00000522243 LRP6O75581 1613 aa30.58■■■□□ 2.49
SDCBP-209ENST00000522243 SPATA31A6Q5VVP1 1343 aa30.58■■■□□ 2.49
SDCBP-209ENST00000522243 TMEM132EQ6IEE7 984 aa30.58■■■□□ 2.49
SDCBP-209ENST00000522243 C1orf167Q5SNV9 1468 aa30.57■■■□□ 2.48
SDCBP-209ENST00000522243 PIK3C2GO75747 1445 aa30.56■■■□□ 2.48
SDCBP-209ENST00000522243 MEX3CQ5U5Q3 659 aaKnown RBP30.54■■■□□ 2.48
SDCBP-209ENST00000522243 ORAI2Q96SN7 254 aa30.53■■■□□ 2.48
SDCBP-209ENST00000522243 NUTM2BA6NNL0 878 aaPredicted RBP30.52■■■□□ 2.48
SDCBP-209ENST00000522243 NUTM2EB1AL46 878 aaPredicted RBP30.52■■■□□ 2.48
SDCBP-209ENST00000522243 WAPLQ7Z5K2 1190 aa30.52■■■□□ 2.48
SDCBP-209ENST00000522243 NUTM2AQ8IVF1 878 aaPredicted RBP30.52■■■□□ 2.48
SDCBP-209ENST00000522243 LRPPRCP42704 1394 aaKnown RBP30.52■■■□□ 2.48
SDCBP-209ENST00000522243 LRRC59Q96AG4 307 aaKnown RBP30.5■■■□□ 2.47
SDCBP-209ENST00000522243 KNDC1Q76NI1 1749 aa30.49■■■□□ 2.47
SDCBP-209ENST00000522243 TECPR2O15040 1411 aa30.48■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms