RNA–Protein interactions for RNA: ENST00000522073.5

TTC1-204, Transcript of tetratricopeptide repeat domain 1, humanhuman

TSL 2

Gene TTC1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-204ENST00000522073 CEP164Q9UPV0 1460 aa13.33□□□□□ -0.28
TTC1-204ENST00000522073 IL21Q9HBE4 155 aa13.32□□□□□ -0.28
TTC1-204ENST00000522073 CCDC88BA6NC98 1476 aa13.31□□□□□ -0.28
TTC1-204ENST00000522073 HDGFP51858 240 aaKnown RBP13.3□□□□□ -0.28
TTC1-204ENST00000522073 AMER1Q5JTC6 1135 aaPredicted RBP13.3□□□□□ -0.28
TTC1-204ENST00000522073 TTC13Q8NBP0 860 aa13.3□□□□□ -0.28
TTC1-204ENST00000522073 NPDC1Q9NQX5 325 aaPredicted RBP13.3□□□□□ -0.28
TTC1-204ENST00000522073 LAPTM4AQ15012 233 aa13.29□□□□□ -0.28
TTC1-204ENST00000522073 KIF21AQ7Z4S6 1674 aa13.28□□□□□ -0.28
TTC1-204ENST00000522073 APLP1P51693 650 aa13.28□□□□□ -0.28
TTC1-204ENST00000522073 PPP1R18Q6NYC8 613 aa13.27□□□□□ -0.29
TTC1-204ENST00000522073 ZNF516Q92618 1163 aa13.27□□□□□ -0.29
TTC1-204ENST00000522073 RNF40O75150 1001 aa13.26□□□□□ -0.29
TTC1-204ENST00000522073 WDR62O43379 1518 aa13.25□□□□□ -0.29
TTC1-204ENST00000522073 GFRA3O60609 400 aa13.24□□□□□ -0.29
TTC1-204ENST00000522073 PADI6Q6TGC4 694 aa13.24□□□□□ -0.29
TTC1-204ENST00000522073 PRKD2Q9BZL6 878 aa13.24□□□□□ -0.29
TTC1-204ENST00000522073 RTN4Q9NQC3 1192 aaKnown RBP13.24□□□□□ -0.29
TTC1-204ENST00000522073 SUPT5HO00267 1087 aaKnown RBP13.23□□□□□ -0.29
TTC1-204ENST00000522073 LCE2BO14633 110 aa13.22□□□□□ -0.29
TTC1-204ENST00000522073 SWT1Q5T5J6 900 aaKnown RBP13.22□□□□□ -0.29
TTC1-204ENST00000522073 NECTIN2Q92692 538 aa13.21□□□□□ -0.29
TTC1-204ENST00000522073 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.21□□□□□ -0.29
TTC1-204ENST00000522073 SLF2Q8IX21 1173 aa13.2□□□□□ -0.3
TTC1-204ENST00000522073 V9GY48 417 aaPredicted RBP13.2□□□□□ -0.3
TTC1-204ENST00000522073 URB2Q14146 1524 aaKnown RBP13.19□□□□□ -0.3
TTC1-204ENST00000522073 EYA1Q99502 592 aa13.19□□□□□ -0.3
TTC1-204ENST00000522073 NKX2-3Q8TAU0 364 aa13.18□□□□□ -0.3
TTC1-204ENST00000522073 TRAF7Q6Q0C0 670 aa13.16□□□□□ -0.3
TTC1-204ENST00000522073 NRG2O14511 850 aaPredicted RBP13.14□□□□□ -0.31
TTC1-204ENST00000522073 COPS2P61201 443 aa13.14□□□□□ -0.31
TTC1-204ENST00000522073 MLLT3P42568 568 aaPredicted RBP13.13□□□□□ -0.31
TTC1-204ENST00000522073 ARHGEF1Q92888 912 aaKnown RBP13.13□□□□□ -0.31
TTC1-204ENST00000522073 ZPR1O75312 459 aa13.1□□□□□ -0.31
TTC1-204ENST00000522073 SLC4A3P48751 1232 aa13.1□□□□□ -0.31
TTC1-204ENST00000522073 GGCXP38435 758 aa13.09□□□□□ -0.31
TTC1-204ENST00000522073 TMUB1Q9BVT8 246 aa13.09□□□□□ -0.31
TTC1-204ENST00000522073 PTGDRQ13258 359 aa13.08□□□□□ -0.32
TTC1-204ENST00000522073 TOPBP1Q92547 1522 aa13.08□□□□□ -0.32
TTC1-204ENST00000522073 PRR14Q9BWN1 585 aa13.07□□□□□ -0.32
TTC1-204ENST00000522073 IFT140Q96RY7 1462 aa13.06□□□□□ -0.32
TTC1-204ENST00000522073 KCNV2Q8TDN2 545 aa13.06□□□□□ -0.32
TTC1-204ENST00000522073 TSHZ2Q9NRE2 1034 aa13.06□□□□□ -0.32
TTC1-204ENST00000522073 PCDHB3Q9Y5E6 796 aa13.05□□□□□ -0.32
TTC1-204ENST00000522073 ABCC8Q09428 1581 aa13.04□□□□□ -0.32
TTC1-204ENST00000522073 DNAJB2P25686 324 aa13.04□□□□□ -0.32
TTC1-204ENST00000522073 PDZRN3Q9UPQ7 1066 aa13.04□□□□□ -0.32
TTC1-204ENST00000522073 ZNF608Q9ULD9 1512 aaPredicted RBP13.03□□□□□ -0.32
TTC1-204ENST00000522073 BLOC1S3Q6QNY0 202 aa13.02□□□□□ -0.33
TTC1-204ENST00000522073 ADGRG1Q9Y653 693 aa13.02□□□□□ -0.33
TTC1-204ENST00000522073 RBM46Q8TBY0 533 aaKnown RBP13.01□□□□□ -0.33
TTC1-204ENST00000522073 TMEM134Q9H6X4 195 aa13.01□□□□□ -0.33
TTC1-204ENST00000522073 DNMBPQ6XZF7 1577 aa13.01□□□□□ -0.33
TTC1-204ENST00000522073 RNF223E7ERA6 249 aa12.98□□□□□ -0.33
TTC1-204ENST00000522073 RCCD1A6NED2 376 aa12.97□□□□□ -0.33
TTC1-204ENST00000522073 POLA1P09884 1462 aaPredicted RBP12.97□□□□□ -0.33
TTC1-204ENST00000522073 FAM161AQ3B820 660 aa12.96□□□□□ -0.33
TTC1-204ENST00000522073 EMID1Q96A84 441 aaPredicted RBP12.96□□□□□ -0.33
TTC1-204ENST00000522073 AQRO60306 1485 aaKnown RBP eCLIP12.96□□□□□ -0.34
TTC1-204ENST00000522073 SOGA1O94964 1423 aa12.96□□□□□ -0.34
TTC1-204ENST00000522073 NUTM2FA1L443 756 aa12.95□□□□□ -0.34
TTC1-204ENST00000522073 ACTN4O43707 911 aaKnown RBP12.95□□□□□ -0.34
TTC1-204ENST00000522073 TRIM67Q6ZTA4 783 aa12.95□□□□□ -0.34
TTC1-204ENST00000522073 PRDM2Q13029 1718 aa12.95□□□□□ -0.34
TTC1-204ENST00000522073 RAD54L2Q9Y4B4 1467 aa12.95□□□□□ -0.34
TTC1-204ENST00000522073 TLL1O43897 1013 aa12.94□□□□□ -0.34
TTC1-204ENST00000522073 SLC19A1P41440 591 aa12.94□□□□□ -0.34
TTC1-204ENST00000522073 TDRD9Q8NDG6 1382 aaKnown RBP12.94□□□□□ -0.34
TTC1-204ENST00000522073 KMT5BQ4FZB7 885 aa12.93□□□□□ -0.34
TTC1-204ENST00000522073 FGD5Q6ZNL6 1462 aa12.92□□□□□ -0.34
TTC1-204ENST00000522073 CFHP08603 1231 aa12.91□□□□□ -0.34
TTC1-204ENST00000522073 SLC10A3P09131 477 aa12.91□□□□□ -0.34
TTC1-204ENST00000522073 CUX1P39880 1505 aa12.91□□□□□ -0.34
TTC1-204ENST00000522073 ANKLE1Q8NAG6 615 aa12.9□□□□□ -0.34
TTC1-204ENST00000522073 FCHSD2O94868 740 aa12.89□□□□□ -0.35
TTC1-204ENST00000522073 SPRYD7Q5W111 196 aa12.89□□□□□ -0.35
TTC1-204ENST00000522073 ZNF787Q6DD87 383 aa12.89□□□□□ -0.35
TTC1-204ENST00000522073 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.88□□□□□ -0.35
TTC1-204ENST00000522073 PPEF1O14829 653 aaPredicted RBP12.88□□□□□ -0.35
TTC1-204ENST00000522073 S1PR4O95977 384 aa12.88□□□□□ -0.35
TTC1-204ENST00000522073 EIF4G3O43432 1585 aaKnown RBP12.88□□□□□ -0.35
TTC1-204ENST00000522073 SEMA3EO15041 775 aa12.87□□□□□ -0.35
TTC1-204ENST00000522073 ZNF598Q86UK7 904 aaKnown RBP12.87□□□□□ -0.35
TTC1-204ENST00000522073 TARBP1Q13395 1621 aaKnown RBP12.87□□□□□ -0.35
TTC1-204ENST00000522073 P3H3Q8IVL6 736 aa12.86□□□□□ -0.35
TTC1-204ENST00000522073 PXYLP1Q8TE99 480 aa12.86□□□□□ -0.35
TTC1-204ENST00000522073 LIAT1Q6ZQX7 453 aa12.85□□□□□ -0.35
TTC1-204ENST00000522073 ADH1BP00325 375 aa12.84□□□□□ -0.35
TTC1-204ENST00000522073 OATP04181 439 aa12.84□□□□□ -0.35
TTC1-204ENST00000522073 PRR20EP86478 221 aa12.84□□□□□ -0.35
TTC1-204ENST00000522073 PRR20CP86479 221 aa12.84□□□□□ -0.35
TTC1-204ENST00000522073 PRR20DP86480 221 aa12.84□□□□□ -0.35
TTC1-204ENST00000522073 PRR20BP86481 221 aa12.84□□□□□ -0.35
TTC1-204ENST00000522073 PRR20AP86496 221 aa12.84□□□□□ -0.35
TTC1-204ENST00000522073 NR1I2O75469 434 aa12.83□□□□□ -0.36
TTC1-204ENST00000522073 CHMP7Q8WUX9 453 aaPredicted RBP12.83□□□□□ -0.36
TTC1-204ENST00000522073 WRNQ14191 1432 aaPredicted RBP eCLIP12.82□□□□□ -0.36
TTC1-204ENST00000522073 SNAPC4Q5SXM2 1469 aa12.81□□□□□ -0.36
TTC1-204ENST00000522073 GRIN2BQ13224 1484 aa12.8□□□□□ -0.36
TTC1-204ENST00000522073 DGAT1O75907 488 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms