RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 SLC4A1APQ9BWU0 796 aaKnown RBP26.8■■□□□ 1.88
TRAPPC9-211ENST00000521700 BCANQ96GW7 911 aa26.79■■□□□ 1.88
TRAPPC9-211ENST00000521700 LRRC7Q96NW7 1537 aa26.79■■□□□ 1.88
TRAPPC9-211ENST00000521700 PPP1R15AO75807 674 aaPredicted RBP26.78■■□□□ 1.88
TRAPPC9-211ENST00000521700 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.78■■□□□ 1.88
TRAPPC9-211ENST00000521700 SENP3Q9H4L4 574 aaPredicted RBP26.78■■□□□ 1.88
TRAPPC9-211ENST00000521700 PLEKHG1Q9ULL1 1385 aa26.77■■□□□ 1.88
TRAPPC9-211ENST00000521700 NUTM2DQ5VT03 806 aaPredicted RBP26.77■■□□□ 1.88
TRAPPC9-211ENST00000521700 TRPM2O94759 1503 aa26.75■■□□□ 1.87
TRAPPC9-211ENST00000521700 CLTCL1P53675 1640 aa26.73■■□□□ 1.87
TRAPPC9-211ENST00000521700 KCNA6P17658 529 aa26.73■■□□□ 1.87
TRAPPC9-211ENST00000521700 TOM1O60784 492 aa26.72■■□□□ 1.87
TRAPPC9-211ENST00000521700 SETD5Q9C0A6 1442 aa26.7■■□□□ 1.86
TRAPPC9-211ENST00000521700 FOXD1Q16676 465 aa26.69■■□□□ 1.86
TRAPPC9-211ENST00000521700 ZNF326Q5BKZ1 582 aaKnown RBP26.69■■□□□ 1.86
TRAPPC9-211ENST00000521700 MPHOSPH9Q99550 1183 aa26.69■■□□□ 1.86
TRAPPC9-211ENST00000521700 TBX22Q9Y458 520 aa26.69■■□□□ 1.86
TRAPPC9-211ENST00000521700 ADAMTS13Q76LX8 1427 aa26.66■■□□□ 1.86
TRAPPC9-211ENST00000521700 PIP4K2BP78356 416 aa26.66■■□□□ 1.86
TRAPPC9-211ENST00000521700 XIRP1Q702N8 1843 aaKnown RBP26.65■■□□□ 1.86
TRAPPC9-211ENST00000521700 KIF1BO60333 1816 aa26.65■■□□□ 1.86
TRAPPC9-211ENST00000521700 ALKQ9UM73 1620 aa26.65■■□□□ 1.86
TRAPPC9-211ENST00000521700 PROSER2Q86WR7 435 aaPredicted RBP26.63■■□□□ 1.85
TRAPPC9-211ENST00000521700 SCAF1Q9H7N4 1312 aaKnown RBP26.63■■□□□ 1.85
TRAPPC9-211ENST00000521700 ACIN1Q9UKV3 1341 aaKnown RBP26.63■■□□□ 1.85
TRAPPC9-211ENST00000521700 NWD1Q149M9 1564 aa26.63■■□□□ 1.85
TRAPPC9-211ENST00000521700 CHD2O14647 1828 aaKnown RBP26.62■■□□□ 1.85
TRAPPC9-211ENST00000521700 TMEM94Q12767 1356 aa26.61■■□□□ 1.85
TRAPPC9-211ENST00000521700 RAB3GAP2Q9H2M9 1393 aa26.6■■□□□ 1.85
TRAPPC9-211ENST00000521700 RBM33Q96EV2 1170 aaKnown RBP26.6■■□□□ 1.85
TRAPPC9-211ENST00000521700 NEXMIFQ5QGS0 1516 aa26.6■■□□□ 1.85
TRAPPC9-211ENST00000521700 NKTRP30414 1462 aaKnown RBP26.59■■□□□ 1.85
TRAPPC9-211ENST00000521700 DIP2AQ14689 1571 aa26.58■■□□□ 1.85
TRAPPC9-211ENST00000521700 NRXN3Q9Y4C0 1643 aa26.56■■□□□ 1.84
TRAPPC9-211ENST00000521700 PIK3R4Q99570 1358 aa26.56■■□□□ 1.84
TRAPPC9-211ENST00000521700 SETBP1Q9Y6X0 1596 aa26.54■■□□□ 1.84
TRAPPC9-211ENST00000521700 HSPA1LP34931 641 aa26.53■■□□□ 1.84
TRAPPC9-211ENST00000521700 CCDC144AA2RUR9 1427 aa26.52■■□□□ 1.84
TRAPPC9-211ENST00000521700 RPGRIP1LQ68CZ1 1315 aa26.52■■□□□ 1.84
TRAPPC9-211ENST00000521700 PTPRUQ92729 1446 aa26.51■■□□□ 1.83
TRAPPC9-211ENST00000521700 VGFO15240 615 aaPredicted RBP26.5■■□□□ 1.83
TRAPPC9-211ENST00000521700 AMOTL2Q9Y2J4 779 aa26.5■■□□□ 1.83
TRAPPC9-211ENST00000521700 HRCP23327 699 aa26.47■■□□□ 1.83
TRAPPC9-211ENST00000521700 METP08581 1390 aa26.46■■□□□ 1.83
TRAPPC9-211ENST00000521700 SPATA31E1Q6ZUB1 1445 aa26.46■■□□□ 1.83
TRAPPC9-211ENST00000521700 MSH6P52701 1360 aa26.46■■□□□ 1.83
TRAPPC9-211ENST00000521700 RGL3Q3MIN7 710 aa26.45■■□□□ 1.82
TRAPPC9-211ENST00000521700 PPLO60437 1756 aa26.45■■□□□ 1.82
TRAPPC9-211ENST00000521700 NCOA3Q9Y6Q9 1424 aa26.44■■□□□ 1.82
TRAPPC9-211ENST00000521700 DISP3Q9P2K9 1392 aa26.44■■□□□ 1.82
TRAPPC9-211ENST00000521700 XRN1Q8IZH2 1706 aaKnown RBP26.41■■□□□ 1.82
TRAPPC9-211ENST00000521700 C14orf37Q86TY3 774 aa26.4■■□□□ 1.82
TRAPPC9-211ENST00000521700 FAM135BQ49AJ0 1406 aa26.39■■□□□ 1.82
TRAPPC9-211ENST00000521700 ADGRF5Q8IZF2 1346 aa26.38■■□□□ 1.81
TRAPPC9-211ENST00000521700 C19orf44Q9H6X5 657 aa26.37■■□□□ 1.81
TRAPPC9-211ENST00000521700 SLAIN2Q9P270 581 aa26.37■■□□□ 1.81
TRAPPC9-211ENST00000521700 SETD1AO15047 1707 aaKnown RBP26.36■■□□□ 1.81
TRAPPC9-211ENST00000521700 ANKRD30BQ9BXX2 1392 aa26.35■■□□□ 1.81
TRAPPC9-211ENST00000521700 IFT172Q9UG01 1749 aa26.34■■□□□ 1.81
TRAPPC9-211ENST00000521700 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.34■■□□□ 1.81
TRAPPC9-211ENST00000521700 ROBO1Q9Y6N7 1651 aa26.32■■□□□ 1.8
TRAPPC9-211ENST00000521700 CADPS2Q86UW7 1296 aa26.31■■□□□ 1.8
TRAPPC9-211ENST00000521700 ATF3P18847 181 aa26.3■■□□□ 1.8
TRAPPC9-211ENST00000521700 ROBO2Q9HCK4 1378 aa26.26■■□□□ 1.79
TRAPPC9-211ENST00000521700 ILDR2Q71H61 639 aa26.26■■□□□ 1.79
TRAPPC9-211ENST00000521700 PIK3C2GO75747 1445 aa26.24■■□□□ 1.79
TRAPPC9-211ENST00000521700 PTCH1Q13635 1447 aa26.24■■□□□ 1.79
TRAPPC9-211ENST00000521700 DCCP43146 1447 aa26.23■■□□□ 1.79
TRAPPC9-211ENST00000521700 PRAG1Q86YV5 1406 aa26.23■■□□□ 1.79
TRAPPC9-211ENST00000521700 ADGRL3Q9HAR2 1447 aa26.22■■□□□ 1.79
TRAPPC9-211ENST00000521700 TMEM132EQ6IEE7 984 aa26.21■■□□□ 1.79
TRAPPC9-211ENST00000521700 MYOM2P54296 1465 aa26.2■■□□□ 1.78
TRAPPC9-211ENST00000521700 NRXN1Q9ULB1 1477 aa26.2■■□□□ 1.78
TRAPPC9-211ENST00000521700 MED1Q15648 1581 aaPredicted RBP26.2■■□□□ 1.78
TRAPPC9-211ENST00000521700 NALCNQ8IZF0 1738 aa26.19■■□□□ 1.78
TRAPPC9-211ENST00000521700 C14orf93Q9H972 538 aaKnown RBP26.19■■□□□ 1.78
TRAPPC9-211ENST00000521700 SOCS7O14512 581 aa26.18■■□□□ 1.78
TRAPPC9-211ENST00000521700 STK26Q9P289 416 aa26.18■■□□□ 1.78
TRAPPC9-211ENST00000521700 ASXL1Q8IXJ9 1541 aa26.18■■□□□ 1.78
TRAPPC9-211ENST00000521700 LRPPRCP42704 1394 aaKnown RBP26.17■■□□□ 1.78
TRAPPC9-211ENST00000521700 MST1RQ04912 1400 aa26.16■■□□□ 1.78
TRAPPC9-211ENST00000521700 CFAP70Q5T0N1 1121 aa26.16■■□□□ 1.78
TRAPPC9-211ENST00000521700 BRINP3Q76B58 766 aa26.16■■□□□ 1.78
TRAPPC9-211ENST00000521700 PHLPP1O60346 1717 aa26.16■■□□□ 1.78
TRAPPC9-211ENST00000521700 DCAF11Q8TEB1 546 aa26.14■■□□□ 1.78
TRAPPC9-211ENST00000521700 ABCC11Q96J66 1382 aa26.14■■□□□ 1.78
TRAPPC9-211ENST00000521700 TECPR2O15040 1411 aa26.14■■□□□ 1.77
TRAPPC9-211ENST00000521700 KDM2AQ9Y2K7 1162 aa26.13■■□□□ 1.77
TRAPPC9-211ENST00000521700 WAPLQ7Z5K2 1190 aa26.12■■□□□ 1.77
TRAPPC9-211ENST00000521700 YTHDC2Q9H6S0 1430 aaKnown RBP26.12■■□□□ 1.77
TRAPPC9-211ENST00000521700 COL16A1Q07092 1604 aaPredicted RBP26.1■■□□□ 1.77
TRAPPC9-211ENST00000521700 AHDC1Q5TGY3 1603 aaPredicted RBP26.1■■□□□ 1.77
TRAPPC9-211ENST00000521700 DHX57Q6P158 1386 aaKnown RBP26.09■■□□□ 1.77
TRAPPC9-211ENST00000521700 KNDC1Q76NI1 1749 aa26.08■■□□□ 1.77
TRAPPC9-211ENST00000521700 LAMC1P11047 1609 aa26.08■■□□□ 1.77
TRAPPC9-211ENST00000521700 STAC3Q96MF2 364 aa26.08■■□□□ 1.77
TRAPPC9-211ENST00000521700 SIRT1Q96EB6 747 aa26.07■■□□□ 1.76
TRAPPC9-211ENST00000521700 PLEKHH1Q9ULM0 1364 aa26.07■■□□□ 1.76
TRAPPC9-211ENST00000521700 C1orf167Q5SNV9 1468 aa26.06■■□□□ 1.76
TRAPPC9-211ENST00000521700 JCADQ9P266 1359 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms