RNA–Protein interactions for RNA: ENST00000521690.1

LAMA4-216, Transcript of laminin subunit alpha 4, humanhuman

TSL 4

Gene LAMA4, Length 539 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-216ENST00000521690 PPLO60437 1756 aa23.57■■□□□ 1.36
LAMA4-216ENST00000521690 MYOM2P54296 1465 aa23.56■■□□□ 1.36
LAMA4-216ENST00000521690 DCAF11Q8TEB1 546 aa23.56■■□□□ 1.36
LAMA4-216ENST00000521690 TMEM2Q9UHN6 1383 aa23.55■■□□□ 1.36
LAMA4-216ENST00000521690 SLIT1O75093 1534 aa23.55■■□□□ 1.36
LAMA4-216ENST00000521690 HDGFP51858 240 aaKnown RBP23.55■■□□□ 1.36
LAMA4-216ENST00000521690 ZFYVE9O95405 1425 aa23.55■■□□□ 1.36
LAMA4-216ENST00000521690 PPP1R15AO75807 674 aaPredicted RBP23.54■■□□□ 1.36
LAMA4-216ENST00000521690 ARHGAP23Q9P227 1491 aa23.54■■□□□ 1.36
LAMA4-216ENST00000521690 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.53■■□□□ 1.36
LAMA4-216ENST00000521690 RIMS2Q9UQ26 1411 aa23.52■■□□□ 1.36
LAMA4-216ENST00000521690 VGFO15240 615 aaPredicted RBP23.52■■□□□ 1.36
LAMA4-216ENST00000521690 NRXN1Q9ULB1 1477 aa23.5■■□□□ 1.35
LAMA4-216ENST00000521690 KDM2AQ9Y2K7 1162 aa23.49■■□□□ 1.35
LAMA4-216ENST00000521690 PRAG1Q86YV5 1406 aa23.49■■□□□ 1.35
LAMA4-216ENST00000521690 EID1Q9Y6B2 187 aa23.47■■□□□ 1.35
LAMA4-216ENST00000521690 LMTK3Q96Q04 1460 aa23.46■■□□□ 1.35
LAMA4-216ENST00000521690 SCAF11Q99590 1463 aaKnown RBP23.43■■□□□ 1.34
LAMA4-216ENST00000521690 PIK3C2GO75747 1445 aa23.43■■□□□ 1.34
LAMA4-216ENST00000521690 ADGRF5Q8IZF2 1346 aa23.43■■□□□ 1.34
LAMA4-216ENST00000521690 TXNDC2Q86VQ3 553 aa23.43■■□□□ 1.34
LAMA4-216ENST00000521690 KIAA1210Q9ULL0 1709 aa23.42■■□□□ 1.34
LAMA4-216ENST00000521690 NBPF8Q3BBV2 869 aa23.41■■□□□ 1.34
LAMA4-216ENST00000521690 ANKLE2Q86XL3 938 aa23.41■■□□□ 1.34
LAMA4-216ENST00000521690 LAMC1P11047 1609 aa23.41■■□□□ 1.34
LAMA4-216ENST00000521690 TRPM1Q7Z4N2 1603 aa23.4■■□□□ 1.34
LAMA4-216ENST00000521690 SETBP1Q9Y6X0 1596 aa23.4■■□□□ 1.34
LAMA4-216ENST00000521690 PLEKHG1Q9ULL1 1385 aa23.4■■□□□ 1.34
LAMA4-216ENST00000521690 LTKP29376 864 aa23.39■■□□□ 1.33
LAMA4-216ENST00000521690 NUTM2DQ5VT03 806 aaPredicted RBP23.39■■□□□ 1.33
LAMA4-216ENST00000521690 RALGAPBQ86X10 1494 aa23.38■■□□□ 1.33
LAMA4-216ENST00000521690 POLR1AO95602 1720 aaPredicted RBP23.38■■□□□ 1.33
LAMA4-216ENST00000521690 C14orf93Q9H972 538 aaKnown RBP23.35■■□□□ 1.33
LAMA4-216ENST00000521690 MED14O60244 1454 aa23.35■■□□□ 1.33
LAMA4-216ENST00000521690 NRXN3Q9Y4C0 1643 aa23.34■■□□□ 1.33
LAMA4-216ENST00000521690 ALKQ9UM73 1620 aa23.33■■□□□ 1.32
LAMA4-216ENST00000521690 DIP2AQ14689 1571 aa23.32■■□□□ 1.32
LAMA4-216ENST00000521690 IQGAP1P46940 1657 aa23.32■■□□□ 1.32
LAMA4-216ENST00000521690 GPRASP1Q5JY77 1395 aa23.31■■□□□ 1.32
LAMA4-216ENST00000521690 CFAP70Q5T0N1 1121 aa23.31■■□□□ 1.32
LAMA4-216ENST00000521690 ROCK2O75116 1388 aaKnown RBP23.3■■□□□ 1.32
LAMA4-216ENST00000521690 HSPA2P54652 639 aa23.3■■□□□ 1.32
LAMA4-216ENST00000521690 SETD1AO15047 1707 aaKnown RBP23.29■■□□□ 1.32
LAMA4-216ENST00000521690 NPHP4O75161 1426 aaPredicted RBP23.29■■□□□ 1.32
LAMA4-216ENST00000521690 ADAMTS13Q76LX8 1427 aa23.29■■□□□ 1.32
LAMA4-216ENST00000521690 BCANQ96GW7 911 aa23.28■■□□□ 1.32
LAMA4-216ENST00000521690 TBX22Q9Y458 520 aa23.27■■□□□ 1.32
LAMA4-216ENST00000521690 ADGRB1O14514 1584 aa23.27■■□□□ 1.32
LAMA4-216ENST00000521690 NCKAP5LQ9HCH0 1330 aa23.26■■□□□ 1.31
LAMA4-216ENST00000521690 NBPF1Q3BBV0 1214 aa23.25■■□□□ 1.31
LAMA4-216ENST00000521690 STRCQ7RTU9 1775 aa23.24■■□□□ 1.31
LAMA4-216ENST00000521690 CARD11Q9BXL7 1154 aa23.24■■□□□ 1.31
LAMA4-216ENST00000521690 ASXL1Q8IXJ9 1541 aa23.23■■□□□ 1.31
LAMA4-216ENST00000521690 PIK3R4Q99570 1358 aa23.22■■□□□ 1.31
LAMA4-216ENST00000521690 SLC26A8Q96RN1 970 aa23.2■■□□□ 1.3
LAMA4-216ENST00000521690 METP08581 1390 aa23.19■■□□□ 1.3
LAMA4-216ENST00000521690 SENP3Q9H4L4 574 aaPredicted RBP23.19■■□□□ 1.3
LAMA4-216ENST00000521690 YTHDC2Q9H6S0 1430 aaKnown RBP23.18■■□□□ 1.3
LAMA4-216ENST00000521690 TMEM132EQ6IEE7 984 aa23.18■■□□□ 1.3
LAMA4-216ENST00000521690 LRPPRCP42704 1394 aaKnown RBP23.17■■□□□ 1.3
LAMA4-216ENST00000521690 DMRT2Q9Y5R5 561 aa23.17■■□□□ 1.3
LAMA4-216ENST00000521690 EIF4G2P78344 907 aaKnown RBP eCLIP23.16■■□□□ 1.3
LAMA4-216ENST00000521690 EIF3AQ14152 1382 aaKnown RBP23.15■■□□□ 1.3
LAMA4-216ENST00000521690 ABCC11Q96J66 1382 aa23.15■■□□□ 1.3
LAMA4-216ENST00000521690 USP47Q96K76 1375 aa23.15■■□□□ 1.3
LAMA4-216ENST00000521690 KNDC1Q76NI1 1749 aa23.15■■□□□ 1.3
LAMA4-216ENST00000521690 DLC1Q96QB1 1528 aa23.14■■□□□ 1.3
LAMA4-216ENST00000521690 TECPR2O15040 1411 aa23.14■■□□□ 1.29
LAMA4-216ENST00000521690 CHD2O14647 1828 aaKnown RBP23.12■■□□□ 1.29
LAMA4-216ENST00000521690 XRN1Q8IZH2 1706 aaKnown RBP23.11■■□□□ 1.29
LAMA4-216ENST00000521690 SIRT1Q96EB6 747 aa23.11■■□□□ 1.29
LAMA4-216ENST00000521690 CPS1P31327 1500 aa23.11■■□□□ 1.29
LAMA4-216ENST00000521690 ARHGEF28Q8N1W1 1705 aaKnown RBP23.11■■□□□ 1.29
LAMA4-216ENST00000521690 PTPRUQ92729 1446 aa23.09■■□□□ 1.29
LAMA4-216ENST00000521690 TRAK1Q9UPV9 953 aa23.09■■□□□ 1.29
LAMA4-216ENST00000521690 NWD1Q149M9 1564 aa23.09■■□□□ 1.29
LAMA4-216ENST00000521690 FAM135BQ49AJ0 1406 aa23.08■■□□□ 1.29
LAMA4-216ENST00000521690 STK26Q9P289 416 aa23.08■■□□□ 1.29
LAMA4-216ENST00000521690 AMOTL2Q9Y2J4 779 aa23.08■■□□□ 1.29
LAMA4-216ENST00000521690 PTCH1Q13635 1447 aa23.08■■□□□ 1.28
LAMA4-216ENST00000521690 HSPA5P11021 654 aaKnown RBP23.07■■□□□ 1.28
LAMA4-216ENST00000521690 KCNA6P17658 529 aa23.06■■□□□ 1.28
LAMA4-216ENST00000521690 SLC24A1O60721 1099 aa23.05■■□□□ 1.28
LAMA4-216ENST00000521690 ST20-MTHFSA0A0A6YYL1 179 aa23.04■■□□□ 1.28
LAMA4-216ENST00000521690 CENPJQ9HC77 1338 aaPredicted RBP23.04■■□□□ 1.28
LAMA4-216ENST00000521690 SBNO2Q9Y2G9 1366 aa23.03■■□□□ 1.28
LAMA4-216ENST00000521690 NKTRP30414 1462 aaKnown RBP23.03■■□□□ 1.28
LAMA4-216ENST00000521690 ROBO2Q9HCK4 1378 aa23.01■■□□□ 1.27
LAMA4-216ENST00000521690 QRICH2Q9H0J4 1663 aa23.01■■□□□ 1.27
LAMA4-216ENST00000521690 PRAM1Q96QH2 718 aa23■■□□□ 1.27
LAMA4-216ENST00000521690 POGKQ9P215 609 aa23■■□□□ 1.27
LAMA4-216ENST00000521690 TESK2Q96S53 571 aa22.98■■□□□ 1.27
LAMA4-216ENST00000521690 STRCP1A6NGW2 1772 aa22.96■■□□□ 1.27
LAMA4-216ENST00000521690 WAPLQ7Z5K2 1190 aa22.95■■□□□ 1.26
LAMA4-216ENST00000521690 HIRIP3Q9BW71 556 aaPredicted RBP22.95■■□□□ 1.26
LAMA4-216ENST00000521690 PLEKHH1Q9ULM0 1364 aa22.94■■□□□ 1.26
LAMA4-216ENST00000521690 ZNF316A6NFI3 1004 aaPredicted RBP22.94■■□□□ 1.26
LAMA4-216ENST00000521690 NCOA3Q9Y6Q9 1424 aa22.93■■□□□ 1.26
LAMA4-216ENST00000521690 ADGRB2O60241 1585 aa22.93■■□□□ 1.26
LAMA4-216ENST00000521690 TMF1P82094 1093 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms