RNA–Protein interactions for RNA: ENST00000521049.5

TRAM1-204, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 872 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-204ENST00000521049 MSH6P52701 1360 aa25.54■■□□□ 1.68
TRAM1-204ENST00000521049 ADGRL2O95490 1459 aa25.53■■□□□ 1.68
TRAM1-204ENST00000521049 ADGRB3O60242 1522 aa25.53■■□□□ 1.68
TRAM1-204ENST00000521049 RPRD2Q5VT52 1461 aaKnown RBP25.52■■□□□ 1.68
TRAM1-204ENST00000521049 ANKRD50Q9ULJ7 1429 aa25.5■■□□□ 1.67
TRAM1-204ENST00000521049 PLEKHG1Q9ULL1 1385 aa25.5■■□□□ 1.67
TRAM1-204ENST00000521049 TBX22Q9Y458 520 aa25.5■■□□□ 1.67
TRAM1-204ENST00000521049 FAM50AQ14320 339 aaKnown RBP25.49■■□□□ 1.67
TRAM1-204ENST00000521049 NWD1Q149M9 1564 aa25.48■■□□□ 1.67
TRAM1-204ENST00000521049 ZFYVE9O95405 1425 aa25.48■■□□□ 1.67
TRAM1-204ENST00000521049 PPP1R15AO75807 674 aaPredicted RBP25.48■■□□□ 1.67
TRAM1-204ENST00000521049 ROBO1Q9Y6N7 1651 aa25.48■■□□□ 1.67
TRAM1-204ENST00000521049 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.46■■□□□ 1.67
TRAM1-204ENST00000521049 RIMS2Q9UQ26 1411 aa25.46■■□□□ 1.67
TRAM1-204ENST00000521049 NCOA3Q9Y6Q9 1424 aa25.45■■□□□ 1.66
TRAM1-204ENST00000521049 JCADQ9P266 1359 aa25.44■■□□□ 1.66
TRAM1-204ENST00000521049 CHGAP10645 457 aaKnown RBP25.39■■□□□ 1.66
TRAM1-204ENST00000521049 C19orf44Q9H6X5 657 aa25.38■■□□□ 1.65
TRAM1-204ENST00000521049 CADPS2Q86UW7 1296 aa25.37■■□□□ 1.65
TRAM1-204ENST00000521049 C14orf37Q86TY3 774 aa25.36■■□□□ 1.65
TRAM1-204ENST00000521049 PIK3R4Q99570 1358 aa25.35■■□□□ 1.65
TRAM1-204ENST00000521049 TMEM131LA2VDJ0 1609 aa25.35■■□□□ 1.65
TRAM1-204ENST00000521049 CHD2O14647 1828 aaKnown RBP25.35■■□□□ 1.65
TRAM1-204ENST00000521049 SPATA31A6Q5VVP1 1343 aa25.34■■□□□ 1.65
TRAM1-204ENST00000521049 ATF3P18847 181 aa25.33■■□□□ 1.65
TRAM1-204ENST00000521049 NUTM2DQ5VT03 806 aaPredicted RBP25.33■■□□□ 1.65
TRAM1-204ENST00000521049 ADAMTS13Q76LX8 1427 aa25.33■■□□□ 1.65
TRAM1-204ENST00000521049 PHLPP1O60346 1717 aa25.32■■□□□ 1.64
TRAM1-204ENST00000521049 ROCK1Q13464 1354 aa25.3■■□□□ 1.64
TRAM1-204ENST00000521049 AMOTL2Q9Y2J4 779 aa25.29■■□□□ 1.64
TRAM1-204ENST00000521049 ZNF772Q68DY9 489 aaPredicted RBP25.28■■□□□ 1.64
TRAM1-204ENST00000521049 GCC2Q8IWJ2 1684 aa25.28■■□□□ 1.64
TRAM1-204ENST00000521049 MEX3CQ5U5Q3 659 aaKnown RBP25.26■■□□□ 1.63
TRAM1-204ENST00000521049 UNC13BO14795 1591 aa25.26■■□□□ 1.63
TRAM1-204ENST00000521049 COL16A1Q07092 1604 aaPredicted RBP25.26■■□□□ 1.63
TRAM1-204ENST00000521049 MYO5BQ9ULV0 1848 aa25.26■■□□□ 1.63
TRAM1-204ENST00000521049 DIP2AQ14689 1571 aa25.25■■□□□ 1.63
TRAM1-204ENST00000521049 NUP155O75694 1391 aa25.24■■□□□ 1.63
TRAM1-204ENST00000521049 BRINP3Q76B58 766 aa25.22■■□□□ 1.63
TRAM1-204ENST00000521049 LRP6O75581 1613 aa25.21■■□□□ 1.63
TRAM1-204ENST00000521049 PTPRUQ92729 1446 aa25.2■■□□□ 1.63
TRAM1-204ENST00000521049 E9PCH4 1651 aa25.2■■□□□ 1.63
TRAM1-204ENST00000521049 AHDC1Q5TGY3 1603 aaPredicted RBP25.2■■□□□ 1.62
TRAM1-204ENST00000521049 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.19■■□□□ 1.62
TRAM1-204ENST00000521049 TRPM2O94759 1503 aa25.18■■□□□ 1.62
TRAM1-204ENST00000521049 IQGAP3Q86VI3 1631 aa25.17■■□□□ 1.62
TRAM1-204ENST00000521049 UPF1Q92900 1129 aaKnown RBP eCLIP25.17■■□□□ 1.62
TRAM1-204ENST00000521049 RXRBP28702 533 aa25.16■■□□□ 1.62
TRAM1-204ENST00000521049 DCCP43146 1447 aa25.16■■□□□ 1.62
TRAM1-204ENST00000521049 TRIM52Q96A61 297 aa25.14■■□□□ 1.62
TRAM1-204ENST00000521049 NUTM2BA6NNL0 878 aaPredicted RBP25.12■■□□□ 1.61
TRAM1-204ENST00000521049 NUTM2EB1AL46 878 aaPredicted RBP25.12■■□□□ 1.61
TRAM1-204ENST00000521049 ITGAEP38570 1179 aa25.12■■□□□ 1.61
TRAM1-204ENST00000521049 ZNF326Q5BKZ1 582 aaKnown RBP25.12■■□□□ 1.61
TRAM1-204ENST00000521049 NUTM2AQ8IVF1 878 aaPredicted RBP25.12■■□□□ 1.61
TRAM1-204ENST00000521049 LRRC59Q96AG4 307 aaKnown RBP25.12■■□□□ 1.61
TRAM1-204ENST00000521049 SETD5Q9C0A6 1442 aa25.11■■□□□ 1.61
TRAM1-204ENST00000521049 SHPRHQ149N8 1683 aa25.1■■□□□ 1.61
TRAM1-204ENST00000521049 SETD1AO15047 1707 aaKnown RBP25.09■■□□□ 1.61
TRAM1-204ENST00000521049 METP08581 1390 aa25.08■■□□□ 1.61
TRAM1-204ENST00000521049 MST1RQ04912 1400 aa25.08■■□□□ 1.61
TRAM1-204ENST00000521049 SETBP1Q9Y6X0 1596 aa25.07■■□□□ 1.6
TRAM1-204ENST00000521049 AFF2P51816 1311 aa25.06■■□□□ 1.6
TRAM1-204ENST00000521049 ASXL1Q8IXJ9 1541 aa25.06■■□□□ 1.6
TRAM1-204ENST00000521049 CDK12Q9NYV4 1490 aaPredicted RBP25.04■■□□□ 1.6
TRAM1-204ENST00000521049 NRXN3Q9Y4C0 1643 aa25.03■■□□□ 1.6
TRAM1-204ENST00000521049 XRN1Q8IZH2 1706 aaKnown RBP25.03■■□□□ 1.6
TRAM1-204ENST00000521049 QTRT2Q9H974 415 aaKnown RBP25■■□□□ 1.59
TRAM1-204ENST00000521049 ADGRL3Q9HAR2 1447 aa25■■□□□ 1.59
TRAM1-204ENST00000521049 DDX17Q92841 729 aaKnown RBP24.99■■□□□ 1.59
TRAM1-204ENST00000521049 PNPLA6Q8IY17 1366 aa24.98■■□□□ 1.59
TRAM1-204ENST00000521049 RBM6P78332 1123 aaKnown RBP24.98■■□□□ 1.59
TRAM1-204ENST00000521049 C8orf37Q96NL8 207 aa24.98■■□□□ 1.59
TRAM1-204ENST00000521049 VGFO15240 615 aaPredicted RBP24.95■■□□□ 1.58
TRAM1-204ENST00000521049 NHSL1Q5SYE7 1610 aa24.94■■□□□ 1.58
TRAM1-204ENST00000521049 PPARGC1BQ86YN6 1023 aaKnown RBP24.94■■□□□ 1.58
TRAM1-204ENST00000521049 SPHKAPQ2M3C7 1700 aa24.94■■□□□ 1.58
TRAM1-204ENST00000521049 C1orf167Q5SNV9 1468 aa24.93■■□□□ 1.58
TRAM1-204ENST00000521049 NEXMIFQ5QGS0 1516 aa24.92■■□□□ 1.58
TRAM1-204ENST00000521049 NGLY1Q96IV0 654 aa24.92■■□□□ 1.58
TRAM1-204ENST00000521049 SOS2Q07890 1332 aaPredicted RBP24.9■■□□□ 1.58
TRAM1-204ENST00000521049 RPGRIP1LQ68CZ1 1315 aa24.89■■□□□ 1.58
TRAM1-204ENST00000521049 ADAMTS2O95450 1211 aa24.89■■□□□ 1.58
TRAM1-204ENST00000521049 ORAI2Q96SN7 254 aa24.89■■□□□ 1.58
TRAM1-204ENST00000521049 PTCH1Q13635 1447 aa24.87■■□□□ 1.57
TRAM1-204ENST00000521049 CLTCL1P53675 1640 aa24.87■■□□□ 1.57
TRAM1-204ENST00000521049 ROBO2Q9HCK4 1378 aa24.87■■□□□ 1.57
TRAM1-204ENST00000521049 RGS12O14924 1447 aa24.86■■□□□ 1.57
TRAM1-204ENST00000521049 NAIPQ13075 1403 aa24.84■■□□□ 1.57
TRAM1-204ENST00000521049 FNBP4Q8N3X1 1017 aaPredicted RBP24.83■■□□□ 1.57
TRAM1-204ENST00000521049 USP21Q9UK80 565 aa24.83■■□□□ 1.57
TRAM1-204ENST00000521049 PRAG1Q86YV5 1406 aa24.83■■□□□ 1.57
TRAM1-204ENST00000521049 NALCNQ8IZF0 1738 aa24.82■■□□□ 1.56
TRAM1-204ENST00000521049 TRPC5Q9UL62 973 aaPredicted RBP24.82■■□□□ 1.56
TRAM1-204ENST00000521049 HFM1A2PYH4 1435 aa24.8■■□□□ 1.56
TRAM1-204ENST00000521049 LAMC1P11047 1609 aa24.8■■□□□ 1.56
TRAM1-204ENST00000521049 RRBP1Q9P2E9 1410 aaKnown RBP24.79■■□□□ 1.56
TRAM1-204ENST00000521049 SLC4A1APQ9BWU0 796 aaKnown RBP24.78■■□□□ 1.56
TRAM1-204ENST00000521049 ATAD2Q6PL18 1390 aa24.77■■□□□ 1.56
TRAM1-204ENST00000521049 KIF1BO60333 1816 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms