RNA–Protein interactions for RNA: ENST00000520522.1

CTNNA1-224, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 390 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-224ENST00000520522 PPP4R3CPQ6ZMV5 832 aa13.75□□□□□ -0.21
CTNNA1-224ENST00000520522 NWD1Q149M9 1564 aa13.75□□□□□ -0.21
CTNNA1-224ENST00000520522 KCNA6P17658 529 aa13.74□□□□□ -0.21
CTNNA1-224ENST00000520522 NKTRP30414 1462 aaKnown RBP13.74□□□□□ -0.21
CTNNA1-224ENST00000520522 ZFYVE9O95405 1425 aa13.73□□□□□ -0.21
CTNNA1-224ENST00000520522 TMEM94Q12767 1356 aa13.71□□□□□ -0.21
CTNNA1-224ENST00000520522 FAM135BQ49AJ0 1406 aa13.71□□□□□ -0.22
CTNNA1-224ENST00000520522 TMEM131LA2VDJ0 1609 aa13.71□□□□□ -0.22
CTNNA1-224ENST00000520522 IQGAP3Q86VI3 1631 aa13.71□□□□□ -0.22
CTNNA1-224ENST00000520522 PLEKHG1Q9ULL1 1385 aa13.71□□□□□ -0.22
CTNNA1-224ENST00000520522 SLC26A8Q96RN1 970 aa13.7□□□□□ -0.22
CTNNA1-224ENST00000520522 RIMS2Q9UQ26 1411 aa13.7□□□□□ -0.22
CTNNA1-224ENST00000520522 E9PCH4 1651 aa13.69□□□□□ -0.22
CTNNA1-224ENST00000520522 MYO5BQ9ULV0 1848 aa13.69□□□□□ -0.22
CTNNA1-224ENST00000520522 HDGFP51858 240 aaKnown RBP13.68□□□□□ -0.22
CTNNA1-224ENST00000520522 PROSER2Q86WR7 435 aaPredicted RBP13.67□□□□□ -0.22
CTNNA1-224ENST00000520522 PPP1R15AO75807 674 aaPredicted RBP13.66□□□□□ -0.22
CTNNA1-224ENST00000520522 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.66□□□□□ -0.22
CTNNA1-224ENST00000520522 CHD2O14647 1828 aaKnown RBP13.66□□□□□ -0.22
CTNNA1-224ENST00000520522 DIP2AQ14689 1571 aa13.66□□□□□ -0.22
CTNNA1-224ENST00000520522 BCANQ96GW7 911 aa13.65□□□□□ -0.22
CTNNA1-224ENST00000520522 MSH6P52701 1360 aa13.65□□□□□ -0.22
CTNNA1-224ENST00000520522 ROBO1Q9Y6N7 1651 aa13.65□□□□□ -0.22
CTNNA1-224ENST00000520522 NUP155O75694 1391 aa13.64□□□□□ -0.23
CTNNA1-224ENST00000520522 TBX22Q9Y458 520 aa13.64□□□□□ -0.23
CTNNA1-224ENST00000520522 NCOA3Q9Y6Q9 1424 aa13.64□□□□□ -0.23
CTNNA1-224ENST00000520522 PIK3R4Q99570 1358 aa13.63□□□□□ -0.23
CTNNA1-224ENST00000520522 ADAMTS13Q76LX8 1427 aa13.63□□□□□ -0.23
CTNNA1-224ENST00000520522 CHGAP10645 457 aaKnown RBP13.61□□□□□ -0.23
CTNNA1-224ENST00000520522 RBM33Q96EV2 1170 aaKnown RBP13.6□□□□□ -0.23
CTNNA1-224ENST00000520522 TRPM2O94759 1503 aa13.59□□□□□ -0.23
CTNNA1-224ENST00000520522 SPHKAPQ2M3C7 1700 aa13.59□□□□□ -0.23
CTNNA1-224ENST00000520522 RRBP1Q9P2E9 1410 aaKnown RBP13.58□□□□□ -0.24
CTNNA1-224ENST00000520522 ITGAEP38570 1179 aa13.58□□□□□ -0.24
CTNNA1-224ENST00000520522 SLAIN2Q9P270 581 aa13.58□□□□□ -0.24
CTNNA1-224ENST00000520522 RGS17Q9UGC6 210 aaPredicted RBP13.56□□□□□ -0.24
CTNNA1-224ENST00000520522 SETBP1Q9Y6X0 1596 aa13.56□□□□□ -0.24
CTNNA1-224ENST00000520522 PHLPP1O60346 1717 aa13.56□□□□□ -0.24
CTNNA1-224ENST00000520522 NRXN3Q9Y4C0 1643 aa13.55□□□□□ -0.24
CTNNA1-224ENST00000520522 NUTM2DQ5VT03 806 aaPredicted RBP13.55□□□□□ -0.24
CTNNA1-224ENST00000520522 JCADQ9P266 1359 aa13.55□□□□□ -0.24
CTNNA1-224ENST00000520522 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.54□□□□□ -0.24
CTNNA1-224ENST00000520522 CADPS2Q86UW7 1296 aa13.54□□□□□ -0.24
CTNNA1-224ENST00000520522 C19orf44Q9H6X5 657 aa13.54□□□□□ -0.24
CTNNA1-224ENST00000520522 DCCP43146 1447 aa13.54□□□□□ -0.24
CTNNA1-224ENST00000520522 PTPRUQ92729 1446 aa13.54□□□□□ -0.24
CTNNA1-224ENST00000520522 COL16A1Q07092 1604 aaPredicted RBP13.53□□□□□ -0.24
CTNNA1-224ENST00000520522 XRN1Q8IZH2 1706 aaKnown RBP13.53□□□□□ -0.24
CTNNA1-224ENST00000520522 PPARGC1BQ86YN6 1023 aaKnown RBP13.53□□□□□ -0.24
CTNNA1-224ENST00000520522 NAIPQ13075 1403 aa13.53□□□□□ -0.24
CTNNA1-224ENST00000520522 AHDC1Q5TGY3 1603 aaPredicted RBP13.53□□□□□ -0.24
CTNNA1-224ENST00000520522 C14orf37Q86TY3 774 aa13.52□□□□□ -0.25
CTNNA1-224ENST00000520522 AMOTL2Q9Y2J4 779 aa13.52□□□□□ -0.25
CTNNA1-224ENST00000520522 CLTCL1P53675 1640 aa13.52□□□□□ -0.25
CTNNA1-224ENST00000520522 NEXMIFQ5QGS0 1516 aa13.51□□□□□ -0.25
CTNNA1-224ENST00000520522 KCNA4P22459 653 aa13.51□□□□□ -0.25
CTNNA1-224ENST00000520522 HFM1A2PYH4 1435 aa13.5□□□□□ -0.25
CTNNA1-224ENST00000520522 ATF3P18847 181 aa13.5□□□□□ -0.25
CTNNA1-224ENST00000520522 ZNF326Q5BKZ1 582 aaKnown RBP13.49□□□□□ -0.25
CTNNA1-224ENST00000520522 SPATA31A6Q5VVP1 1343 aa13.48□□□□□ -0.25
CTNNA1-224ENST00000520522 POTEAQ6S8J7 498 aa13.48□□□□□ -0.25
CTNNA1-224ENST00000520522 KIF1BO60333 1816 aa13.48□□□□□ -0.25
CTNNA1-224ENST00000520522 METP08581 1390 aa13.47□□□□□ -0.25
CTNNA1-224ENST00000520522 SHPRHQ149N8 1683 aa13.47□□□□□ -0.25
CTNNA1-224ENST00000520522 BRINP3Q76B58 766 aa13.46□□□□□ -0.25
CTNNA1-224ENST00000520522 MST1RQ04912 1400 aa13.46□□□□□ -0.26
CTNNA1-224ENST00000520522 ADGRL3Q9HAR2 1447 aa13.46□□□□□ -0.26
CTNNA1-224ENST00000520522 LRP6O75581 1613 aa13.46□□□□□ -0.26
CTNNA1-224ENST00000520522 ASXL1Q8IXJ9 1541 aa13.45□□□□□ -0.26
CTNNA1-224ENST00000520522 NCBP3Q53F19 620 aaKnown RBP13.44□□□□□ -0.26
CTNNA1-224ENST00000520522 PTCH1Q13635 1447 aa13.44□□□□□ -0.26
CTNNA1-224ENST00000520522 PRAG1Q86YV5 1406 aa13.44□□□□□ -0.26
CTNNA1-224ENST00000520522 NHSL1Q5SYE7 1610 aa13.43□□□□□ -0.26
CTNNA1-224ENST00000520522 RPGRIP1LQ68CZ1 1315 aa13.42□□□□□ -0.26
CTNNA1-224ENST00000520522 SETD1AO15047 1707 aaKnown RBP13.42□□□□□ -0.26
CTNNA1-224ENST00000520522 SETD5Q9C0A6 1442 aa13.42□□□□□ -0.26
CTNNA1-224ENST00000520522 NALCNQ8IZF0 1738 aa13.42□□□□□ -0.26
CTNNA1-224ENST00000520522 VGFO15240 615 aaPredicted RBP13.41□□□□□ -0.26
CTNNA1-224ENST00000520522 TRIM52Q96A61 297 aa13.41□□□□□ -0.26
CTNNA1-224ENST00000520522 MAPK8IP2Q13387 824 aaPredicted RBP13.4□□□□□ -0.26
CTNNA1-224ENST00000520522 ZNF772Q68DY9 489 aaPredicted RBP13.4□□□□□ -0.26
CTNNA1-224ENST00000520522 SLC4A1APQ9BWU0 796 aaKnown RBP13.4□□□□□ -0.26
CTNNA1-224ENST00000520522 MEX3CQ5U5Q3 659 aaKnown RBP13.39□□□□□ -0.27
CTNNA1-224ENST00000520522 PPLO60437 1756 aa13.39□□□□□ -0.27
CTNNA1-224ENST00000520522 LAMC1P11047 1609 aa13.38□□□□□ -0.27
CTNNA1-224ENST00000520522 C1orf167Q5SNV9 1468 aa13.37□□□□□ -0.27
CTNNA1-224ENST00000520522 CNKSR2Q8WXI2 1034 aa13.37□□□□□ -0.27
CTNNA1-224ENST00000520522 ROBO2Q9HCK4 1378 aa13.36□□□□□ -0.27
CTNNA1-224ENST00000520522 LRRC59Q96AG4 307 aaKnown RBP13.36□□□□□ -0.27
CTNNA1-224ENST00000520522 PNPLA6Q8IY17 1366 aa13.34□□□□□ -0.27
CTNNA1-224ENST00000520522 CCDC144AA2RUR9 1427 aa13.34□□□□□ -0.27
CTNNA1-224ENST00000520522 CDK12Q9NYV4 1490 aaPredicted RBP13.34□□□□□ -0.27
CTNNA1-224ENST00000520522 SPATA31E1Q6ZUB1 1445 aa13.33□□□□□ -0.28
CTNNA1-224ENST00000520522 CDC42BPGQ6DT37 1551 aa13.32□□□□□ -0.28
CTNNA1-224ENST00000520522 NUTM2BA6NNL0 878 aaPredicted RBP13.32□□□□□ -0.28
CTNNA1-224ENST00000520522 NUTM2EB1AL46 878 aaPredicted RBP13.32□□□□□ -0.28
CTNNA1-224ENST00000520522 NUTM2AQ8IVF1 878 aaPredicted RBP13.32□□□□□ -0.28
CTNNA1-224ENST00000520522 ANKRD30BQ9BXX2 1392 aa13.32□□□□□ -0.28
CTNNA1-224ENST00000520522 TECPR2O15040 1411 aa13.31□□□□□ -0.28
CTNNA1-224ENST00000520522 IFT172Q9UG01 1749 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms