RNA–Protein interactions for RNA: ENST00000520485.5

ARFGAP1-214, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2

Gene ARFGAP1, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-214ENST00000520485 LMTK3Q96Q04 1460 aa33.09■■■□□ 2.89
ARFGAP1-214ENST00000520485 TMEM2Q9UHN6 1383 aa33.09■■■□□ 2.89
ARFGAP1-214ENST00000520485 ZFYVE9O95405 1425 aa33.08■■■□□ 2.89
ARFGAP1-214ENST00000520485 THEMISQ8N1K5 641 aaPredicted RBP33.05■■■□□ 2.88
ARFGAP1-214ENST00000520485 SLIT1O75093 1534 aa33.05■■■□□ 2.88
ARFGAP1-214ENST00000520485 ARHGAP23Q9P227 1491 aa33.04■■■□□ 2.88
ARFGAP1-214ENST00000520485 MYOM2P54296 1465 aa33.03■■■□□ 2.88
ARFGAP1-214ENST00000520485 RPGRIP1LQ68CZ1 1315 aa33.03■■■□□ 2.88
ARFGAP1-214ENST00000520485 ADGRF5Q8IZF2 1346 aa33.03■■■□□ 2.88
ARFGAP1-214ENST00000520485 HSPA2P54652 639 aa33.02■■■□□ 2.88
ARFGAP1-214ENST00000520485 TIMELESSQ9UNS1 1208 aa33.02■■■□□ 2.88
ARFGAP1-214ENST00000520485 PPP1R15AO75807 674 aaPredicted RBP32.99■■■□□ 2.87
ARFGAP1-214ENST00000520485 LTKP29376 864 aa32.98■■■□□ 2.87
ARFGAP1-214ENST00000520485 PRAG1Q86YV5 1406 aa32.97■■■□□ 2.87
ARFGAP1-214ENST00000520485 ZEB1P37275 1124 aaPredicted RBP32.97■■■□□ 2.87
ARFGAP1-214ENST00000520485 NBPF8Q3BBV2 869 aa32.96■■■□□ 2.87
ARFGAP1-214ENST00000520485 TXNDC2Q86VQ3 553 aa32.95■■■□□ 2.87
ARFGAP1-214ENST00000520485 SCAF11Q99590 1463 aaKnown RBP32.95■■■□□ 2.86
ARFGAP1-214ENST00000520485 NRXN1Q9ULB1 1477 aa32.95■■■□□ 2.86
ARFGAP1-214ENST00000520485 POLR1AO95602 1720 aaPredicted RBP32.92■■■□□ 2.86
ARFGAP1-214ENST00000520485 VGFO15240 615 aaPredicted RBP32.92■■■□□ 2.86
ARFGAP1-214ENST00000520485 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.92■■■□□ 2.86
ARFGAP1-214ENST00000520485 EID1Q9Y6B2 187 aa32.92■■■□□ 2.86
ARFGAP1-214ENST00000520485 IQGAP1P46940 1657 aa32.92■■■□□ 2.86
ARFGAP1-214ENST00000520485 PIK3C2GO75747 1445 aa32.91■■■□□ 2.86
ARFGAP1-214ENST00000520485 NRXN3Q9Y4C0 1643 aa32.88■■■□□ 2.85
ARFGAP1-214ENST00000520485 NCKAP5LQ9HCH0 1330 aa32.88■■■□□ 2.85
ARFGAP1-214ENST00000520485 ANKLE2Q86XL3 938 aa32.87■■■□□ 2.85
ARFGAP1-214ENST00000520485 TRPM1Q7Z4N2 1603 aa32.87■■■□□ 2.85
ARFGAP1-214ENST00000520485 HDGFP51858 240 aaKnown RBP32.86■■■□□ 2.85
ARFGAP1-214ENST00000520485 AEBP2Q6ZN18 517 aaPredicted RBP32.85■■■□□ 2.85
ARFGAP1-214ENST00000520485 BCANQ96GW7 911 aa32.85■■■□□ 2.85
ARFGAP1-214ENST00000520485 PLEKHG1Q9ULL1 1385 aa32.85■■■□□ 2.85
ARFGAP1-214ENST00000520485 SETBP1Q9Y6X0 1596 aa32.83■■■□□ 2.85
ARFGAP1-214ENST00000520485 CFAP70Q5T0N1 1121 aa32.82■■■□□ 2.85
ARFGAP1-214ENST00000520485 STAC3Q96MF2 364 aa32.82■■■□□ 2.84
ARFGAP1-214ENST00000520485 RALGAPBQ86X10 1494 aa32.8■■■□□ 2.84
ARFGAP1-214ENST00000520485 ALKQ9UM73 1620 aa32.8■■■□□ 2.84
ARFGAP1-214ENST00000520485 STRCQ7RTU9 1775 aa32.79■■■□□ 2.84
ARFGAP1-214ENST00000520485 SETD1AO15047 1707 aaKnown RBP32.79■■■□□ 2.84
ARFGAP1-214ENST00000520485 NPHP4O75161 1426 aaPredicted RBP32.79■■■□□ 2.84
ARFGAP1-214ENST00000520485 NBPF1Q3BBV0 1214 aa32.77■■■□□ 2.84
ARFGAP1-214ENST00000520485 LAMC1P11047 1609 aa32.77■■■□□ 2.84
ARFGAP1-214ENST00000520485 ADAMTS13Q76LX8 1427 aa32.77■■■□□ 2.84
ARFGAP1-214ENST00000520485 ASXL1Q8IXJ9 1541 aa32.77■■■□□ 2.84
ARFGAP1-214ENST00000520485 KIAA1210Q9ULL0 1709 aa32.76■■■□□ 2.84
ARFGAP1-214ENST00000520485 SLC26A8Q96RN1 970 aa32.76■■■□□ 2.83
ARFGAP1-214ENST00000520485 ROCK2O75116 1388 aaKnown RBP32.75■■■□□ 2.83
ARFGAP1-214ENST00000520485 MED14O60244 1454 aa32.74■■■□□ 2.83
ARFGAP1-214ENST00000520485 C14orf93Q9H972 538 aaKnown RBP32.73■■■□□ 2.83
ARFGAP1-214ENST00000520485 TMEM132EQ6IEE7 984 aa32.71■■■□□ 2.83
ARFGAP1-214ENST00000520485 ADGRB1O14514 1584 aa32.7■■■□□ 2.83
ARFGAP1-214ENST00000520485 METP08581 1390 aa32.69■■■□□ 2.82
ARFGAP1-214ENST00000520485 DIP2AQ14689 1571 aa32.68■■■□□ 2.82
ARFGAP1-214ENST00000520485 CARD11Q9BXL7 1154 aa32.64■■■□□ 2.82
ARFGAP1-214ENST00000520485 GPRASP1Q5JY77 1395 aa32.63■■■□□ 2.81
ARFGAP1-214ENST00000520485 STK26Q9P289 416 aa32.6■■■□□ 2.81
ARFGAP1-214ENST00000520485 PTPRUQ92729 1446 aa32.59■■■□□ 2.81
ARFGAP1-214ENST00000520485 TBX22Q9Y458 520 aa32.58■■■□□ 2.81
ARFGAP1-214ENST00000520485 YTHDC2Q9H6S0 1430 aaKnown RBP32.58■■■□□ 2.81
ARFGAP1-214ENST00000520485 TRAK1Q9UPV9 953 aa32.54■■■□□ 2.8
ARFGAP1-214ENST00000520485 USP47Q96K76 1375 aa32.54■■■□□ 2.8
ARFGAP1-214ENST00000520485 LRPPRCP42704 1394 aaKnown RBP32.52■■■□□ 2.8
ARFGAP1-214ENST00000520485 ARHGEF28Q8N1W1 1705 aaKnown RBP32.51■■■□□ 2.8
ARFGAP1-214ENST00000520485 XRN1Q8IZH2 1706 aaKnown RBP32.5■■■□□ 2.79
ARFGAP1-214ENST00000520485 KNDC1Q76NI1 1749 aa32.49■■■□□ 2.79
ARFGAP1-214ENST00000520485 HIRIP3Q9BW71 556 aaPredicted RBP32.49■■■□□ 2.79
ARFGAP1-214ENST00000520485 CHD2O14647 1828 aaKnown RBP32.49■■■□□ 2.79
ARFGAP1-214ENST00000520485 AMOTL2Q9Y2J4 779 aa32.46■■■□□ 2.79
ARFGAP1-214ENST00000520485 PIK3R4Q99570 1358 aa32.46■■■□□ 2.79
ARFGAP1-214ENST00000520485 HSPA5P11021 654 aaKnown RBP32.46■■■□□ 2.79
ARFGAP1-214ENST00000520485 CPS1P31327 1500 aa32.45■■■□□ 2.79
ARFGAP1-214ENST00000520485 NWD1Q149M9 1564 aa32.45■■■□□ 2.79
ARFGAP1-214ENST00000520485 STRCP1A6NGW2 1772 aa32.45■■■□□ 2.78
ARFGAP1-214ENST00000520485 KCNA6P17658 529 aa32.43■■■□□ 2.78
ARFGAP1-214ENST00000520485 ROBO2Q9HCK4 1378 aa32.43■■■□□ 2.78
ARFGAP1-214ENST00000520485 EIF4G2P78344 907 aaKnown RBP eCLIP32.42■■■□□ 2.78
ARFGAP1-214ENST00000520485 ABCC11Q96J66 1382 aa32.42■■■□□ 2.78
ARFGAP1-214ENST00000520485 TECPR2O15040 1411 aa32.42■■■□□ 2.78
ARFGAP1-214ENST00000520485 EIF3AQ14152 1382 aaKnown RBP32.41■■■□□ 2.78
ARFGAP1-214ENST00000520485 PLEKHH1Q9ULM0 1364 aa32.41■■■□□ 2.78
ARFGAP1-214ENST00000520485 DLC1Q96QB1 1528 aa32.41■■■□□ 2.78
ARFGAP1-214ENST00000520485 SAFB2Q14151 953 aaKnown RBP eCLIP32.41■■■□□ 2.78
ARFGAP1-214ENST00000520485 DMRT2Q9Y5R5 561 aa32.41■■■□□ 2.78
ARFGAP1-214ENST00000520485 ZNF335Q9H4Z2 1342 aaPredicted RBP32.4■■■□□ 2.78
ARFGAP1-214ENST00000520485 QRICH2Q9H0J4 1663 aa32.39■■■□□ 2.78
ARFGAP1-214ENST00000520485 ST20-MTHFSA0A0A6YYL1 179 aa32.39■■■□□ 2.78
ARFGAP1-214ENST00000520485 PRAM1Q96QH2 718 aa32.39■■■□□ 2.78
ARFGAP1-214ENST00000520485 WAPLQ7Z5K2 1190 aa32.38■■■□□ 2.77
ARFGAP1-214ENST00000520485 PTCH1Q13635 1447 aa32.38■■■□□ 2.77
ARFGAP1-214ENST00000520485 CENPJQ9HC77 1338 aaPredicted RBP32.35■■■□□ 2.77
ARFGAP1-214ENST00000520485 RBM33Q96EV2 1170 aaKnown RBP32.35■■■□□ 2.77
ARFGAP1-214ENST00000520485 POGKQ9P215 609 aa32.34■■■□□ 2.77
ARFGAP1-214ENST00000520485 NKTRP30414 1462 aaKnown RBP32.31■■■□□ 2.76
ARFGAP1-214ENST00000520485 FAM135BQ49AJ0 1406 aa32.31■■■□□ 2.76
ARFGAP1-214ENST00000520485 MINK1Q8N4C8 1332 aaPredicted RBP32.28■■■□□ 2.76
ARFGAP1-214ENST00000520485 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.27■■■□□ 2.76
ARFGAP1-214ENST00000520485 TESK2Q96S53 571 aa32.26■■■□□ 2.75
ARFGAP1-214ENST00000520485 NALCNQ8IZF0 1738 aa32.24■■■□□ 2.75
ARFGAP1-214ENST00000520485 PROSER2Q86WR7 435 aaPredicted RBP32.24■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms