RNA–Protein interactions for RNA: ENST00000520102.1

CHMP7-208, Transcript of charged multivesicular body protein 7, humanhuman

TSL 4

Gene CHMP7, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-208ENST00000520102 NWD1Q149M9 1564 aa12.18□□□□□ -0.46
CHMP7-208ENST00000520102 ZFYVE9O95405 1425 aa12.17□□□□□ -0.46
CHMP7-208ENST00000520102 NKTRP30414 1462 aaKnown RBP12.16□□□□□ -0.46
CHMP7-208ENST00000520102 TMEM131LA2VDJ0 1609 aa12.16□□□□□ -0.46
CHMP7-208ENST00000520102 PROSER2Q86WR7 435 aaPredicted RBP12.16□□□□□ -0.46
CHMP7-208ENST00000520102 FAM135BQ49AJ0 1406 aa12.16□□□□□ -0.46
CHMP7-208ENST00000520102 BCANQ96GW7 911 aa12.15□□□□□ -0.46
CHMP7-208ENST00000520102 E9PCH4 1651 aa12.15□□□□□ -0.46
CHMP7-208ENST00000520102 ROBO1Q9Y6N7 1651 aa12.15□□□□□ -0.46
CHMP7-208ENST00000520102 RIMS2Q9UQ26 1411 aa12.14□□□□□ -0.47
CHMP7-208ENST00000520102 PLEKHG1Q9ULL1 1385 aa12.14□□□□□ -0.47
CHMP7-208ENST00000520102 IQGAP3Q86VI3 1631 aa12.13□□□□□ -0.47
CHMP7-208ENST00000520102 ROCK1Q13464 1354 aa12.13□□□□□ -0.47
CHMP7-208ENST00000520102 CHD2O14647 1828 aaKnown RBP12.13□□□□□ -0.47
CHMP7-208ENST00000520102 PPP1R15AO75807 674 aaPredicted RBP12.12□□□□□ -0.47
CHMP7-208ENST00000520102 RGS17Q9UGC6 210 aaPredicted RBP12.12□□□□□ -0.47
CHMP7-208ENST00000520102 MSH6P52701 1360 aa12.11□□□□□ -0.47
CHMP7-208ENST00000520102 CHGAP10645 457 aaKnown RBP12.1□□□□□ -0.47
CHMP7-208ENST00000520102 HDGFP51858 240 aaKnown RBP12.1□□□□□ -0.47
CHMP7-208ENST00000520102 ITGAEP38570 1179 aa12.09□□□□□ -0.47
CHMP7-208ENST00000520102 NUTM2DQ5VT03 806 aaPredicted RBP12.09□□□□□ -0.47
CHMP7-208ENST00000520102 ADAMTS13Q76LX8 1427 aa12.09□□□□□ -0.47
CHMP7-208ENST00000520102 NUP155O75694 1391 aa12.08□□□□□ -0.48
CHMP7-208ENST00000520102 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.08□□□□□ -0.48
CHMP7-208ENST00000520102 SLAIN2Q9P270 581 aa12.08□□□□□ -0.48
CHMP7-208ENST00000520102 TBX22Q9Y458 520 aa12.08□□□□□ -0.48
CHMP7-208ENST00000520102 PHLPP1O60346 1717 aa12.07□□□□□ -0.48
CHMP7-208ENST00000520102 DIP2AQ14689 1571 aa12.07□□□□□ -0.48
CHMP7-208ENST00000520102 PPARGC1BQ86YN6 1023 aaKnown RBP12.07□□□□□ -0.48
CHMP7-208ENST00000520102 NCOA3Q9Y6Q9 1424 aa12.05□□□□□ -0.48
CHMP7-208ENST00000520102 PIK3R4Q99570 1358 aa12.05□□□□□ -0.48
CHMP7-208ENST00000520102 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.04□□□□□ -0.48
CHMP7-208ENST00000520102 POTEAQ6S8J7 498 aa12.04□□□□□ -0.48
CHMP7-208ENST00000520102 TRPM2O94759 1503 aa12.04□□□□□ -0.48
CHMP7-208ENST00000520102 COL16A1Q07092 1604 aaPredicted RBP12.04□□□□□ -0.48
CHMP7-208ENST00000520102 PTPRUQ92729 1446 aa12.03□□□□□ -0.48
CHMP7-208ENST00000520102 SPHKAPQ2M3C7 1700 aa12.03□□□□□ -0.48
CHMP7-208ENST00000520102 C14orf37Q86TY3 774 aa12.03□□□□□ -0.48
CHMP7-208ENST00000520102 NRXN3Q9Y4C0 1643 aa12.03□□□□□ -0.48
CHMP7-208ENST00000520102 JCADQ9P266 1359 aa12.03□□□□□ -0.48
CHMP7-208ENST00000520102 C19orf44Q9H6X5 657 aa12.01□□□□□ -0.49
CHMP7-208ENST00000520102 AMOTL2Q9Y2J4 779 aa12.01□□□□□ -0.49
CHMP7-208ENST00000520102 SETBP1Q9Y6X0 1596 aa12.01□□□□□ -0.49
CHMP7-208ENST00000520102 XRN1Q8IZH2 1706 aaKnown RBP12□□□□□ -0.49
CHMP7-208ENST00000520102 CADPS2Q86UW7 1296 aa12□□□□□ -0.49
CHMP7-208ENST00000520102 AHDC1Q5TGY3 1603 aaPredicted RBP12□□□□□ -0.49
CHMP7-208ENST00000520102 ATF3P18847 181 aa11.99□□□□□ -0.49
CHMP7-208ENST00000520102 LRP6O75581 1613 aa11.99□□□□□ -0.49
CHMP7-208ENST00000520102 CLTCL1P53675 1640 aa11.99□□□□□ -0.49
CHMP7-208ENST00000520102 ZNF326Q5BKZ1 582 aaKnown RBP11.98□□□□□ -0.49
CHMP7-208ENST00000520102 SETD1AO15047 1707 aaKnown RBP11.97□□□□□ -0.49
CHMP7-208ENST00000520102 NEXMIFQ5QGS0 1516 aa11.97□□□□□ -0.49
CHMP7-208ENST00000520102 RRBP1Q9P2E9 1410 aaKnown RBP11.97□□□□□ -0.49
CHMP7-208ENST00000520102 METP08581 1390 aa11.97□□□□□ -0.49
CHMP7-208ENST00000520102 SHPRHQ149N8 1683 aa11.97□□□□□ -0.49
CHMP7-208ENST00000520102 DCCP43146 1447 aa11.96□□□□□ -0.49
CHMP7-208ENST00000520102 NAIPQ13075 1403 aa11.96□□□□□ -0.49
CHMP7-208ENST00000520102 SPATA31A6Q5VVP1 1343 aa11.96□□□□□ -0.49
CHMP7-208ENST00000520102 BRINP3Q76B58 766 aa11.96□□□□□ -0.49
CHMP7-208ENST00000520102 ASXL1Q8IXJ9 1541 aa11.95□□□□□ -0.5
CHMP7-208ENST00000520102 MST1RQ04912 1400 aa11.94□□□□□ -0.5
CHMP7-208ENST00000520102 KIF1BO60333 1816 aa11.94□□□□□ -0.5
CHMP7-208ENST00000520102 MEX3CQ5U5Q3 659 aaKnown RBP11.93□□□□□ -0.5
CHMP7-208ENST00000520102 NALCNQ8IZF0 1738 aa11.93□□□□□ -0.5
CHMP7-208ENST00000520102 NHSL1Q5SYE7 1610 aa11.93□□□□□ -0.5
CHMP7-208ENST00000520102 ADGRL3Q9HAR2 1447 aa11.92□□□□□ -0.5
CHMP7-208ENST00000520102 SETD5Q9C0A6 1442 aa11.91□□□□□ -0.5
CHMP7-208ENST00000520102 HFM1A2PYH4 1435 aa11.9□□□□□ -0.5
CHMP7-208ENST00000520102 ZNF772Q68DY9 489 aaPredicted RBP11.9□□□□□ -0.5
CHMP7-208ENST00000520102 NUTM2BA6NNL0 878 aaPredicted RBP11.89□□□□□ -0.51
CHMP7-208ENST00000520102 NUTM2EB1AL46 878 aaPredicted RBP11.89□□□□□ -0.51
CHMP7-208ENST00000520102 NUTM2AQ8IVF1 878 aaPredicted RBP11.89□□□□□ -0.51
CHMP7-208ENST00000520102 DDX17Q92841 729 aaKnown RBP11.89□□□□□ -0.51
CHMP7-208ENST00000520102 TRIM52Q96A61 297 aa11.89□□□□□ -0.51
CHMP7-208ENST00000520102 PTCH1Q13635 1447 aa11.88□□□□□ -0.51
CHMP7-208ENST00000520102 VGFO15240 615 aaPredicted RBP11.87□□□□□ -0.51
CHMP7-208ENST00000520102 LRRC59Q96AG4 307 aaKnown RBP11.87□□□□□ -0.51
CHMP7-208ENST00000520102 SLC4A1APQ9BWU0 796 aaKnown RBP11.87□□□□□ -0.51
CHMP7-208ENST00000520102 ROBO2Q9HCK4 1378 aa11.87□□□□□ -0.51
CHMP7-208ENST00000520102 C1orf167Q5SNV9 1468 aa11.87□□□□□ -0.51
CHMP7-208ENST00000520102 PPLO60437 1756 aa11.87□□□□□ -0.51
CHMP7-208ENST00000520102 PNPLA6Q8IY17 1366 aa11.86□□□□□ -0.51
CHMP7-208ENST00000520102 LAMC1P11047 1609 aa11.85□□□□□ -0.51
CHMP7-208ENST00000520102 PRAG1Q86YV5 1406 aa11.85□□□□□ -0.51
CHMP7-208ENST00000520102 AFF2P51816 1311 aa11.85□□□□□ -0.51
CHMP7-208ENST00000520102 RPGRIP1LQ68CZ1 1315 aa11.85□□□□□ -0.51
CHMP7-208ENST00000520102 RXRBP28702 533 aa11.84□□□□□ -0.51
CHMP7-208ENST00000520102 FOXD1Q16676 465 aa11.84□□□□□ -0.51
CHMP7-208ENST00000520102 UPF1Q92900 1129 aaKnown RBP eCLIP11.83□□□□□ -0.52
CHMP7-208ENST00000520102 C8orf37Q96NL8 207 aa11.83□□□□□ -0.52
CHMP7-208ENST00000520102 ORAI2Q96SN7 254 aa11.83□□□□□ -0.52
CHMP7-208ENST00000520102 CDK12Q9NYV4 1490 aaPredicted RBP11.83□□□□□ -0.52
CHMP7-208ENST00000520102 SOS2Q07890 1332 aaPredicted RBP11.81□□□□□ -0.52
CHMP7-208ENST00000520102 ADGRF5Q8IZF2 1346 aa11.8□□□□□ -0.52
CHMP7-208ENST00000520102 IFT172Q9UG01 1749 aa11.8□□□□□ -0.52
CHMP7-208ENST00000520102 CDC42BPGQ6DT37 1551 aa11.79□□□□□ -0.52
CHMP7-208ENST00000520102 CCDC144AA2RUR9 1427 aa11.79□□□□□ -0.52
CHMP7-208ENST00000520102 RGS12O14924 1447 aa11.79□□□□□ -0.52
CHMP7-208ENST00000520102 SPATA31E1Q6ZUB1 1445 aa11.79□□□□□ -0.52
CHMP7-208ENST00000520102 ADAMTS2O95450 1211 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms