RNA–Protein interactions for RNA: ENST00000520038.1

ARF1P3-201, Transcript of ADP ribosylation factor 1 pseudogene 3, humanhuman

BASIC

Gene ARF1P3, Length 511 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1P3-201ENST00000520038 TMEM94Q12767 1356 aa16.75■□□□□ 0.27
ARF1P3-201ENST00000520038 CHD2O14647 1828 aaKnown RBP16.75■□□□□ 0.27
ARF1P3-201ENST00000520038 KCNA6P17658 529 aa16.74■□□□□ 0.27
ARF1P3-201ENST00000520038 RBM33Q96EV2 1170 aaKnown RBP16.74■□□□□ 0.27
ARF1P3-201ENST00000520038 PPARGC1BQ86YN6 1023 aaKnown RBP16.73■□□□□ 0.27
ARF1P3-201ENST00000520038 STAG3Q9UJ98 1225 aa16.72■□□□□ 0.27
ARF1P3-201ENST00000520038 RIMS2Q9UQ26 1411 aa16.71■□□□□ 0.27
ARF1P3-201ENST00000520038 PLEKHG1Q9ULL1 1385 aa16.71■□□□□ 0.27
ARF1P3-201ENST00000520038 ADAMTS13Q76LX8 1427 aa16.7■□□□□ 0.26
ARF1P3-201ENST00000520038 FAM135BQ49AJ0 1406 aa16.7■□□□□ 0.26
ARF1P3-201ENST00000520038 NKTRP30414 1462 aaKnown RBP16.69■□□□□ 0.26
ARF1P3-201ENST00000520038 SENP3Q9H4L4 574 aaPredicted RBP16.69■□□□□ 0.26
ARF1P3-201ENST00000520038 RGS17Q9UGC6 210 aaPredicted RBP16.68■□□□□ 0.26
ARF1P3-201ENST00000520038 ROBO1Q9Y6N7 1651 aa16.67■□□□□ 0.26
ARF1P3-201ENST00000520038 NRXN3Q9Y4C0 1643 aa16.66■□□□□ 0.26
ARF1P3-201ENST00000520038 NUP155O75694 1391 aa16.65■□□□□ 0.26
ARF1P3-201ENST00000520038 RRBP1Q9P2E9 1410 aaKnown RBP16.64■□□□□ 0.25
ARF1P3-201ENST00000520038 NUTM2DQ5VT03 806 aaPredicted RBP16.64■□□□□ 0.25
ARF1P3-201ENST00000520038 PROSER2Q86WR7 435 aaPredicted RBP16.64■□□□□ 0.25
ARF1P3-201ENST00000520038 PTPRUQ92729 1446 aa16.63■□□□□ 0.25
ARF1P3-201ENST00000520038 SPHKAPQ2M3C7 1700 aa16.63■□□□□ 0.25
ARF1P3-201ENST00000520038 ITGAEP38570 1179 aa16.63■□□□□ 0.25
ARF1P3-201ENST00000520038 TBX22Q9Y458 520 aa16.63■□□□□ 0.25
ARF1P3-201ENST00000520038 NAIPQ13075 1403 aa16.6■□□□□ 0.25
ARF1P3-201ENST00000520038 DIP2AQ14689 1571 aa16.59■□□□□ 0.25
ARF1P3-201ENST00000520038 CLTCL1P53675 1640 aa16.59■□□□□ 0.25
ARF1P3-201ENST00000520038 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.59■□□□□ 0.25
ARF1P3-201ENST00000520038 XRN1Q8IZH2 1706 aaKnown RBP16.58■□□□□ 0.24
ARF1P3-201ENST00000520038 CHGAP10645 457 aaKnown RBP16.57■□□□□ 0.24
ARF1P3-201ENST00000520038 COL16A1Q07092 1604 aaPredicted RBP16.56■□□□□ 0.24
ARF1P3-201ENST00000520038 SETBP1Q9Y6X0 1596 aa16.56■□□□□ 0.24
ARF1P3-201ENST00000520038 PHF23Q9BUL5 403 aaPredicted RBP16.56■□□□□ 0.24
ARF1P3-201ENST00000520038 SLAIN2Q9P270 581 aa16.56■□□□□ 0.24
ARF1P3-201ENST00000520038 NCOA3Q9Y6Q9 1424 aa16.55■□□□□ 0.24
ARF1P3-201ENST00000520038 PIK3R4Q99570 1358 aa16.55■□□□□ 0.24
ARF1P3-201ENST00000520038 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.55■□□□□ 0.24
ARF1P3-201ENST00000520038 NEXMIFQ5QGS0 1516 aa16.55■□□□□ 0.24
ARF1P3-201ENST00000520038 MSH6P52701 1360 aa16.54■□□□□ 0.24
ARF1P3-201ENST00000520038 PHLPP1O60346 1717 aa16.54■□□□□ 0.24
ARF1P3-201ENST00000520038 PPP1R15AO75807 674 aaPredicted RBP16.54■□□□□ 0.24
ARF1P3-201ENST00000520038 BCANQ96GW7 911 aa16.54■□□□□ 0.24
ARF1P3-201ENST00000520038 TRPM2O94759 1503 aa16.53■□□□□ 0.24
ARF1P3-201ENST00000520038 METP08581 1390 aa16.52■□□□□ 0.24
ARF1P3-201ENST00000520038 HDGFP51858 240 aaKnown RBP16.52■□□□□ 0.24
ARF1P3-201ENST00000520038 POTEAQ6S8J7 498 aa16.52■□□□□ 0.24
ARF1P3-201ENST00000520038 SETD1AO15047 1707 aaKnown RBP16.52■□□□□ 0.24
ARF1P3-201ENST00000520038 AMOTL2Q9Y2J4 779 aa16.51■□□□□ 0.23
ARF1P3-201ENST00000520038 AHDC1Q5TGY3 1603 aaPredicted RBP16.49■□□□□ 0.23
ARF1P3-201ENST00000520038 HFM1A2PYH4 1435 aa16.49■□□□□ 0.23
ARF1P3-201ENST00000520038 LRP6O75581 1613 aa16.48■□□□□ 0.23
ARF1P3-201ENST00000520038 KIF1BO60333 1816 aa16.47■□□□□ 0.23
ARF1P3-201ENST00000520038 C19orf44Q9H6X5 657 aa16.47■□□□□ 0.23
ARF1P3-201ENST00000520038 NALCNQ8IZF0 1738 aa16.45■□□□□ 0.22
ARF1P3-201ENST00000520038 MST1RQ04912 1400 aa16.45■□□□□ 0.22
ARF1P3-201ENST00000520038 JCADQ9P266 1359 aa16.44■□□□□ 0.22
ARF1P3-201ENST00000520038 BRINP3Q76B58 766 aa16.44■□□□□ 0.22
ARF1P3-201ENST00000520038 DCCP43146 1447 aa16.44■□□□□ 0.22
ARF1P3-201ENST00000520038 SHPRHQ149N8 1683 aa16.43■□□□□ 0.22
ARF1P3-201ENST00000520038 PPLO60437 1756 aa16.43■□□□□ 0.22
ARF1P3-201ENST00000520038 NHSL1Q5SYE7 1610 aa16.42■□□□□ 0.22
ARF1P3-201ENST00000520038 CADPS2Q86UW7 1296 aa16.42■□□□□ 0.22
ARF1P3-201ENST00000520038 ASXL1Q8IXJ9 1541 aa16.41■□□□□ 0.22
ARF1P3-201ENST00000520038 ZNF326Q5BKZ1 582 aaKnown RBP16.4■□□□□ 0.22
ARF1P3-201ENST00000520038 PRAG1Q86YV5 1406 aa16.39■□□□□ 0.21
ARF1P3-201ENST00000520038 ADGRL3Q9HAR2 1447 aa16.39■□□□□ 0.21
ARF1P3-201ENST00000520038 FOXD1Q16676 465 aa16.39■□□□□ 0.21
ARF1P3-201ENST00000520038 ROBO2Q9HCK4 1378 aa16.38■□□□□ 0.21
ARF1P3-201ENST00000520038 ATF3P18847 181 aa16.38■□□□□ 0.21
ARF1P3-201ENST00000520038 C14orf37Q86TY3 774 aa16.38■□□□□ 0.21
ARF1P3-201ENST00000520038 DDX17Q92841 729 aaKnown RBP16.37■□□□□ 0.21
ARF1P3-201ENST00000520038 SETD5Q9C0A6 1442 aa16.36■□□□□ 0.21
ARF1P3-201ENST00000520038 LAMC1P11047 1609 aa16.36■□□□□ 0.21
ARF1P3-201ENST00000520038 IFT172Q9UG01 1749 aa16.36■□□□□ 0.21
ARF1P3-201ENST00000520038 PTCH1Q13635 1447 aa16.36■□□□□ 0.21
ARF1P3-201ENST00000520038 SPATA31E1Q6ZUB1 1445 aa16.36■□□□□ 0.21
ARF1P3-201ENST00000520038 SLC4A1APQ9BWU0 796 aaKnown RBP16.35■□□□□ 0.21
ARF1P3-201ENST00000520038 SPATA31A6Q5VVP1 1343 aa16.35■□□□□ 0.21
ARF1P3-201ENST00000520038 TRIM52Q96A61 297 aa16.34■□□□□ 0.21
ARF1P3-201ENST00000520038 C1orf167Q5SNV9 1468 aa16.33■□□□□ 0.2
ARF1P3-201ENST00000520038 RPGRIP1LQ68CZ1 1315 aa16.31■□□□□ 0.2
ARF1P3-201ENST00000520038 ADGRF5Q8IZF2 1346 aa16.31■□□□□ 0.2
ARF1P3-201ENST00000520038 VGFO15240 615 aaPredicted RBP16.3■□□□□ 0.2
ARF1P3-201ENST00000520038 PNPLA6Q8IY17 1366 aa16.29■□□□□ 0.2
ARF1P3-201ENST00000520038 ORAI2Q96SN7 254 aa16.28■□□□□ 0.2
ARF1P3-201ENST00000520038 MPHOSPH9Q99550 1183 aa16.28■□□□□ 0.2
ARF1P3-201ENST00000520038 TECPR2O15040 1411 aa16.26■□□□□ 0.19
ARF1P3-201ENST00000520038 SOS2Q07890 1332 aaPredicted RBP16.25■□□□□ 0.19
ARF1P3-201ENST00000520038 NUTM2BA6NNL0 878 aaPredicted RBP16.24■□□□□ 0.19
ARF1P3-201ENST00000520038 NUTM2EB1AL46 878 aaPredicted RBP16.24■□□□□ 0.19
ARF1P3-201ENST00000520038 NUTM2AQ8IVF1 878 aaPredicted RBP16.24■□□□□ 0.19
ARF1P3-201ENST00000520038 PIK3C2GO75747 1445 aa16.24■□□□□ 0.19
ARF1P3-201ENST00000520038 CDC42BPGQ6DT37 1551 aa16.24■□□□□ 0.19
ARF1P3-201ENST00000520038 KNDC1Q76NI1 1749 aa16.24■□□□□ 0.19
ARF1P3-201ENST00000520038 PLEKHH1Q9ULM0 1364 aa16.24■□□□□ 0.19
ARF1P3-201ENST00000520038 CCDC144AA2RUR9 1427 aa16.23■□□□□ 0.19
ARF1P3-201ENST00000520038 LRRC59Q96AG4 307 aaKnown RBP16.23■□□□□ 0.19
ARF1P3-201ENST00000520038 RGL3Q3MIN7 710 aa16.22■□□□□ 0.19
ARF1P3-201ENST00000520038 NRXN1Q9ULB1 1477 aa16.22■□□□□ 0.19
ARF1P3-201ENST00000520038 AFF2P51816 1311 aa16.21■□□□□ 0.19
ARF1P3-201ENST00000520038 COL22A1Q8NFW1 1626 aaPredicted RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms