RNA–Protein interactions for RNA: ENST00000519894.1

FBXO28-204, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-204ENST00000519894 CPS1P31327 1500 aa22.64■■□□□ 1.21
FBXO28-204ENST00000519894 PPP4R3CPQ6ZMV5 832 aa22.63■■□□□ 1.21
FBXO28-204ENST00000519894 STRCP1A6NGW2 1772 aa22.59■■□□□ 1.21
FBXO28-204ENST00000519894 UBAP1LF5GYI3 381 aa22.58■■□□□ 1.21
FBXO28-204ENST00000519894 TMEM131LA2VDJ0 1609 aa22.57■■□□□ 1.2
FBXO28-204ENST00000519894 MYO5BQ9ULV0 1848 aa22.57■■□□□ 1.2
FBXO28-204ENST00000519894 HFM1A2PYH4 1435 aa22.57■■□□□ 1.2
FBXO28-204ENST00000519894 CHGAP10645 457 aaKnown RBP22.54■■□□□ 1.2
FBXO28-204ENST00000519894 ZFYVE9O95405 1425 aa22.54■■□□□ 1.2
FBXO28-204ENST00000519894 LRRC7Q96NW7 1537 aa22.52■■□□□ 1.2
FBXO28-204ENST00000519894 RIMS2Q9UQ26 1411 aa22.52■■□□□ 1.2
FBXO28-204ENST00000519894 SLC26A8Q96RN1 970 aa22.51■■□□□ 1.19
FBXO28-204ENST00000519894 HDGFP51858 240 aaKnown RBP22.5■■□□□ 1.19
FBXO28-204ENST00000519894 SPHKAPQ2M3C7 1700 aa22.49■■□□□ 1.19
FBXO28-204ENST00000519894 TRIM52Q96A61 297 aa22.49■■□□□ 1.19
FBXO28-204ENST00000519894 TOM1O60784 492 aa22.48■■□□□ 1.19
FBXO28-204ENST00000519894 PLEKHG1Q9ULL1 1385 aa22.47■■□□□ 1.19
FBXO28-204ENST00000519894 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.46■■□□□ 1.19
FBXO28-204ENST00000519894 BCANQ96GW7 911 aa22.46■■□□□ 1.19
FBXO28-204ENST00000519894 PPP1R15AO75807 674 aaPredicted RBP22.45■■□□□ 1.18
FBXO28-204ENST00000519894 KCNA6P17658 529 aa22.45■■□□□ 1.18
FBXO28-204ENST00000519894 C1QBPQ07021 282 aaKnown RBP22.45■■□□□ 1.18
FBXO28-204ENST00000519894 NUTM2DQ5VT03 806 aaPredicted RBP22.45■■□□□ 1.18
FBXO28-204ENST00000519894 ALKQ9UM73 1620 aa22.43■■□□□ 1.18
FBXO28-204ENST00000519894 PIP4K2BP78356 416 aa22.42■■□□□ 1.18
FBXO28-204ENST00000519894 SLC4A1APQ9BWU0 796 aaKnown RBP22.41■■□□□ 1.18
FBXO28-204ENST00000519894 TRPM2O94759 1503 aa22.41■■□□□ 1.18
FBXO28-204ENST00000519894 XIRP1Q702N8 1843 aaKnown RBP22.41■■□□□ 1.18
FBXO28-204ENST00000519894 CLTCL1P53675 1640 aa22.4■■□□□ 1.18
FBXO28-204ENST00000519894 TBX22Q9Y458 520 aa22.4■■□□□ 1.18
FBXO28-204ENST00000519894 ADAMTS13Q76LX8 1427 aa22.38■■□□□ 1.17
FBXO28-204ENST00000519894 NWD1Q149M9 1564 aa22.38■■□□□ 1.17
FBXO28-204ENST00000519894 CNKSR2Q8WXI2 1034 aa22.37■■□□□ 1.17
FBXO28-204ENST00000519894 ZNF326Q5BKZ1 582 aaKnown RBP22.36■■□□□ 1.17
FBXO28-204ENST00000519894 PROSER2Q86WR7 435 aaPredicted RBP22.36■■□□□ 1.17
FBXO28-204ENST00000519894 RNF216Q9NWF9 866 aaPredicted RBP22.36■■□□□ 1.17
FBXO28-204ENST00000519894 TMEM94Q12767 1356 aa22.36■■□□□ 1.17
FBXO28-204ENST00000519894 CHD2O14647 1828 aaKnown RBP22.36■■□□□ 1.17
FBXO28-204ENST00000519894 HSPA1LP34931 641 aa22.34■■□□□ 1.17
FBXO28-204ENST00000519894 RBM33Q96EV2 1170 aaKnown RBP22.34■■□□□ 1.17
FBXO28-204ENST00000519894 NKTRP30414 1462 aaKnown RBP22.34■■□□□ 1.17
FBXO28-204ENST00000519894 KIF1BO60333 1816 aa22.33■■□□□ 1.16
FBXO28-204ENST00000519894 DIP2AQ14689 1571 aa22.31■■□□□ 1.16
FBXO28-204ENST00000519894 MPHOSPH9Q99550 1183 aa22.31■■□□□ 1.16
FBXO28-204ENST00000519894 SETD5Q9C0A6 1442 aa22.31■■□□□ 1.16
FBXO28-204ENST00000519894 NEXMIFQ5QGS0 1516 aa22.3■■□□□ 1.16
FBXO28-204ENST00000519894 PIK3R4Q99570 1358 aa22.29■■□□□ 1.16
FBXO28-204ENST00000519894 NRXN3Q9Y4C0 1643 aa22.28■■□□□ 1.16
FBXO28-204ENST00000519894 SETBP1Q9Y6X0 1596 aa22.27■■□□□ 1.16
FBXO28-204ENST00000519894 PTPRUQ92729 1446 aa22.26■■□□□ 1.15
FBXO28-204ENST00000519894 ACIN1Q9UKV3 1341 aaKnown RBP22.25■■□□□ 1.15
FBXO28-204ENST00000519894 AMOTL2Q9Y2J4 779 aa22.24■■□□□ 1.15
FBXO28-204ENST00000519894 RAB3GAP2Q9H2M9 1393 aa22.23■■□□□ 1.15
FBXO28-204ENST00000519894 DISP3Q9P2K9 1392 aa22.23■■□□□ 1.15
FBXO28-204ENST00000519894 RPGRIP1LQ68CZ1 1315 aa22.22■■□□□ 1.15
FBXO28-204ENST00000519894 MSH6P52701 1360 aa22.22■■□□□ 1.15
FBXO28-204ENST00000519894 METP08581 1390 aa22.21■■□□□ 1.15
FBXO28-204ENST00000519894 NCOA3Q9Y6Q9 1424 aa22.21■■□□□ 1.15
FBXO28-204ENST00000519894 VGFO15240 615 aaPredicted RBP22.2■■□□□ 1.14
FBXO28-204ENST00000519894 CCDC144AA2RUR9 1427 aa22.2■■□□□ 1.14
FBXO28-204ENST00000519894 FAM135BQ49AJ0 1406 aa22.2■■□□□ 1.14
FBXO28-204ENST00000519894 PPLO60437 1756 aa22.17■■□□□ 1.14
FBXO28-204ENST00000519894 XRN1Q8IZH2 1706 aaKnown RBP22.17■■□□□ 1.14
FBXO28-204ENST00000519894 SPATA31E1Q6ZUB1 1445 aa22.15■■□□□ 1.14
FBXO28-204ENST00000519894 SLAIN2Q9P270 581 aa22.15■■□□□ 1.14
FBXO28-204ENST00000519894 RGL3Q3MIN7 710 aa22.14■■□□□ 1.13
FBXO28-204ENST00000519894 C14orf37Q86TY3 774 aa22.14■■□□□ 1.13
FBXO28-204ENST00000519894 C19orf44Q9H6X5 657 aa22.14■■□□□ 1.13
FBXO28-204ENST00000519894 ROBO1Q9Y6N7 1651 aa22.14■■□□□ 1.13
FBXO28-204ENST00000519894 SETD1AO15047 1707 aaKnown RBP22.12■■□□□ 1.13
FBXO28-204ENST00000519894 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.12■■□□□ 1.13
FBXO28-204ENST00000519894 ADGRF5Q8IZF2 1346 aa22.1■■□□□ 1.13
FBXO28-204ENST00000519894 HRCP23327 699 aa22.1■■□□□ 1.13
FBXO28-204ENST00000519894 ILDR2Q71H61 639 aa22.09■■□□□ 1.13
FBXO28-204ENST00000519894 CADPS2Q86UW7 1296 aa22.09■■□□□ 1.13
FBXO28-204ENST00000519894 MED1Q15648 1581 aaPredicted RBP22.08■■□□□ 1.13
FBXO28-204ENST00000519894 ATF3P18847 181 aa22.08■■□□□ 1.13
FBXO28-204ENST00000519894 IFT172Q9UG01 1749 aa22.07■■□□□ 1.12
FBXO28-204ENST00000519894 ANKRD30BQ9BXX2 1392 aa22.07■■□□□ 1.12
FBXO28-204ENST00000519894 DCCP43146 1447 aa22.03■■□□□ 1.12
FBXO28-204ENST00000519894 ROBO2Q9HCK4 1378 aa22.02■■□□□ 1.12
FBXO28-204ENST00000519894 PTCH1Q13635 1447 aa22.02■■□□□ 1.12
FBXO28-204ENST00000519894 PRAG1Q86YV5 1406 aa22.01■■□□□ 1.11
FBXO28-204ENST00000519894 ADGRL3Q9HAR2 1447 aa22.01■■□□□ 1.11
FBXO28-204ENST00000519894 PHLPP1O60346 1717 aa22■■□□□ 1.11
FBXO28-204ENST00000519894 NALCNQ8IZF0 1738 aa21.99■■□□□ 1.11
FBXO28-204ENST00000519894 PIK3C2GO75747 1445 aa21.98■■□□□ 1.11
FBXO28-204ENST00000519894 MST1RQ04912 1400 aa21.98■■□□□ 1.11
FBXO28-204ENST00000519894 BRINP3Q76B58 766 aa21.98■■□□□ 1.11
FBXO28-204ENST00000519894 TMEM132EQ6IEE7 984 aa21.96■■□□□ 1.11
FBXO28-204ENST00000519894 NRXN1Q9ULB1 1477 aa21.95■■□□□ 1.1
FBXO28-204ENST00000519894 ASXL1Q8IXJ9 1541 aa21.95■■□□□ 1.1
FBXO28-204ENST00000519894 COL16A1Q07092 1604 aaPredicted RBP21.95■■□□□ 1.1
FBXO28-204ENST00000519894 C14orf93Q9H972 538 aaKnown RBP21.94■■□□□ 1.1
FBXO28-204ENST00000519894 MYOM2P54296 1465 aa21.94■■□□□ 1.1
FBXO28-204ENST00000519894 AHDC1Q5TGY3 1603 aaPredicted RBP21.94■■□□□ 1.1
FBXO28-204ENST00000519894 LRPPRCP42704 1394 aaKnown RBP21.93■■□□□ 1.1
FBXO28-204ENST00000519894 STK26Q9P289 416 aa21.93■■□□□ 1.1
FBXO28-204ENST00000519894 JCADQ9P266 1359 aa21.92■■□□□ 1.1
FBXO28-204ENST00000519894 TECPR2O15040 1411 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms