RNA–Protein interactions for RNA: ENST00000519470.1

MCM4-208, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 2

Gene MCM4, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-208ENST00000519470 MYO5BQ9ULV0 1848 aa18.2■□□□□ 0.5
MCM4-208ENST00000519470 TMEM131LA2VDJ0 1609 aa18.19■□□□□ 0.5
MCM4-208ENST00000519470 SLC26A8Q96RN1 970 aa18.18■□□□□ 0.5
MCM4-208ENST00000519470 PLEKHG1Q9ULL1 1385 aa18.17■□□□□ 0.5
MCM4-208ENST00000519470 IQGAP3Q86VI3 1631 aa18.16■□□□□ 0.5
MCM4-208ENST00000519470 E9PCH4 1651 aa18.16■□□□□ 0.5
MCM4-208ENST00000519470 CHD2O14647 1828 aaKnown RBP18.15■□□□□ 0.5
MCM4-208ENST00000519470 RIMS2Q9UQ26 1411 aa18.15■□□□□ 0.5
MCM4-208ENST00000519470 PHF23Q9BUL5 403 aaPredicted RBP18.14■□□□□ 0.49
MCM4-208ENST00000519470 PROSER2Q86WR7 435 aaPredicted RBP18.13■□□□□ 0.49
MCM4-208ENST00000519470 ROBO1Q9Y6N7 1651 aa18.12■□□□□ 0.49
MCM4-208ENST00000519470 HDGFP51858 240 aaKnown RBP18.12■□□□□ 0.49
MCM4-208ENST00000519470 SENP3Q9H4L4 574 aaPredicted RBP18.11■□□□□ 0.49
MCM4-208ENST00000519470 DIP2AQ14689 1571 aa18.1■□□□□ 0.49
MCM4-208ENST00000519470 NCOA3Q9Y6Q9 1424 aa18.09■□□□□ 0.49
MCM4-208ENST00000519470 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.09■□□□□ 0.49
MCM4-208ENST00000519470 TBX22Q9Y458 520 aa18.09■□□□□ 0.49
MCM4-208ENST00000519470 ADAMTS13Q76LX8 1427 aa18.08■□□□□ 0.49
MCM4-208ENST00000519470 MSH6P52701 1360 aa18.08■□□□□ 0.49
MCM4-208ENST00000519470 PPP1R15AO75807 674 aaPredicted RBP18.07■□□□□ 0.48
MCM4-208ENST00000519470 RBM33Q96EV2 1170 aaKnown RBP18.07■□□□□ 0.48
MCM4-208ENST00000519470 BCANQ96GW7 911 aa18.07■□□□□ 0.48
MCM4-208ENST00000519470 NUP155O75694 1391 aa18.06■□□□□ 0.48
MCM4-208ENST00000519470 PIK3R4Q99570 1358 aa18.05■□□□□ 0.48
MCM4-208ENST00000519470 RGS17Q9UGC6 210 aaPredicted RBP18.05■□□□□ 0.48
MCM4-208ENST00000519470 CHGAP10645 457 aaKnown RBP18.02■□□□□ 0.48
MCM4-208ENST00000519470 SPHKAPQ2M3C7 1700 aa18.02■□□□□ 0.48
MCM4-208ENST00000519470 SLAIN2Q9P270 581 aa18.02■□□□□ 0.48
MCM4-208ENST00000519470 PHLPP1O60346 1717 aa18.01■□□□□ 0.47
MCM4-208ENST00000519470 TRPM2O94759 1503 aa18.01■□□□□ 0.47
MCM4-208ENST00000519470 NRXN3Q9Y4C0 1643 aa17.99■□□□□ 0.47
MCM4-208ENST00000519470 SETBP1Q9Y6X0 1596 aa17.99■□□□□ 0.47
MCM4-208ENST00000519470 COL16A1Q07092 1604 aaPredicted RBP17.98■□□□□ 0.47
MCM4-208ENST00000519470 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.98■□□□□ 0.47
MCM4-208ENST00000519470 ITGAEP38570 1179 aa17.98■□□□□ 0.47
MCM4-208ENST00000519470 RRBP1Q9P2E9 1410 aaKnown RBP17.98■□□□□ 0.47
MCM4-208ENST00000519470 JCADQ9P266 1359 aa17.97■□□□□ 0.47
MCM4-208ENST00000519470 NUTM2DQ5VT03 806 aaPredicted RBP17.97■□□□□ 0.47
MCM4-208ENST00000519470 PTPRUQ92729 1446 aa17.97■□□□□ 0.47
MCM4-208ENST00000519470 XRN1Q8IZH2 1706 aaKnown RBP17.96■□□□□ 0.47
MCM4-208ENST00000519470 C19orf44Q9H6X5 657 aa17.96■□□□□ 0.47
MCM4-208ENST00000519470 AHDC1Q5TGY3 1603 aaPredicted RBP17.95■□□□□ 0.46
MCM4-208ENST00000519470 CADPS2Q86UW7 1296 aa17.95■□□□□ 0.46
MCM4-208ENST00000519470 DCCP43146 1447 aa17.94■□□□□ 0.46
MCM4-208ENST00000519470 POTEAQ6S8J7 498 aa17.93■□□□□ 0.46
MCM4-208ENST00000519470 AMOTL2Q9Y2J4 779 aa17.93■□□□□ 0.46
MCM4-208ENST00000519470 CLTCL1P53675 1640 aa17.93■□□□□ 0.46
MCM4-208ENST00000519470 NAIPQ13075 1403 aa17.92■□□□□ 0.46
MCM4-208ENST00000519470 PPARGC1BQ86YN6 1023 aaKnown RBP17.92■□□□□ 0.46
MCM4-208ENST00000519470 C14orf37Q86TY3 774 aa17.91■□□□□ 0.46
MCM4-208ENST00000519470 NEXMIFQ5QGS0 1516 aa17.91■□□□□ 0.46
MCM4-208ENST00000519470 ATF3P18847 181 aa17.9■□□□□ 0.46
MCM4-208ENST00000519470 SHPRHQ149N8 1683 aa17.9■□□□□ 0.46
MCM4-208ENST00000519470 SPATA31A6Q5VVP1 1343 aa17.89■□□□□ 0.45
MCM4-208ENST00000519470 KIF1BO60333 1816 aa17.88■□□□□ 0.45
MCM4-208ENST00000519470 LRP6O75581 1613 aa17.87■□□□□ 0.45
MCM4-208ENST00000519470 METP08581 1390 aa17.87■□□□□ 0.45
MCM4-208ENST00000519470 ZNF326Q5BKZ1 582 aaKnown RBP17.86■□□□□ 0.45
MCM4-208ENST00000519470 BRINP3Q76B58 766 aa17.86■□□□□ 0.45
MCM4-208ENST00000519470 HFM1A2PYH4 1435 aa17.85■□□□□ 0.45
MCM4-208ENST00000519470 MST1RQ04912 1400 aa17.85■□□□□ 0.45
MCM4-208ENST00000519470 ASXL1Q8IXJ9 1541 aa17.84■□□□□ 0.45
MCM4-208ENST00000519470 ADGRL3Q9HAR2 1447 aa17.84■□□□□ 0.45
MCM4-208ENST00000519470 NHSL1Q5SYE7 1610 aa17.83■□□□□ 0.45
MCM4-208ENST00000519470 SETD1AO15047 1707 aaKnown RBP17.83■□□□□ 0.44
MCM4-208ENST00000519470 PRAG1Q86YV5 1406 aa17.81■□□□□ 0.44
MCM4-208ENST00000519470 SETD5Q9C0A6 1442 aa17.81■□□□□ 0.44
MCM4-208ENST00000519470 NALCNQ8IZF0 1738 aa17.81■□□□□ 0.44
MCM4-208ENST00000519470 PTCH1Q13635 1447 aa17.81■□□□□ 0.44
MCM4-208ENST00000519470 RPGRIP1LQ68CZ1 1315 aa17.77■□□□□ 0.44
MCM4-208ENST00000519470 VGFO15240 615 aaPredicted RBP17.77■□□□□ 0.44
MCM4-208ENST00000519470 ZNF772Q68DY9 489 aaPredicted RBP17.77■□□□□ 0.44
MCM4-208ENST00000519470 PPLO60437 1756 aa17.76■□□□□ 0.43
MCM4-208ENST00000519470 LAMC1P11047 1609 aa17.76■□□□□ 0.43
MCM4-208ENST00000519470 MEX3CQ5U5Q3 659 aaKnown RBP17.75■□□□□ 0.43
MCM4-208ENST00000519470 TRIM52Q96A61 297 aa17.74■□□□□ 0.43
MCM4-208ENST00000519470 C1orf167Q5SNV9 1468 aa17.74■□□□□ 0.43
MCM4-208ENST00000519470 LRRC59Q96AG4 307 aaKnown RBP17.73■□□□□ 0.43
MCM4-208ENST00000519470 SLC4A1APQ9BWU0 796 aaKnown RBP17.73■□□□□ 0.43
MCM4-208ENST00000519470 ROBO2Q9HCK4 1378 aa17.73■□□□□ 0.43
MCM4-208ENST00000519470 CDK12Q9NYV4 1490 aaPredicted RBP17.71■□□□□ 0.43
MCM4-208ENST00000519470 PNPLA6Q8IY17 1366 aa17.71■□□□□ 0.43
MCM4-208ENST00000519470 NUTM2BA6NNL0 878 aaPredicted RBP17.68■□□□□ 0.42
MCM4-208ENST00000519470 NUTM2EB1AL46 878 aaPredicted RBP17.68■□□□□ 0.42
MCM4-208ENST00000519470 NUTM2AQ8IVF1 878 aaPredicted RBP17.68■□□□□ 0.42
MCM4-208ENST00000519470 DDX17Q92841 729 aaKnown RBP17.67■□□□□ 0.42
MCM4-208ENST00000519470 AFF2P51816 1311 aa17.67■□□□□ 0.42
MCM4-208ENST00000519470 IFT172Q9UG01 1749 aa17.67■□□□□ 0.42
MCM4-208ENST00000519470 CCDC144AA2RUR9 1427 aa17.66■□□□□ 0.42
MCM4-208ENST00000519470 SPATA31E1Q6ZUB1 1445 aa17.66■□□□□ 0.42
MCM4-208ENST00000519470 RXRBP28702 533 aa17.66■□□□□ 0.42
MCM4-208ENST00000519470 SOS2Q07890 1332 aaPredicted RBP17.66■□□□□ 0.42
MCM4-208ENST00000519470 CDC42BPGQ6DT37 1551 aa17.66■□□□□ 0.42
MCM4-208ENST00000519470 TECPR2O15040 1411 aa17.64■□□□□ 0.42
MCM4-208ENST00000519470 FOXD1Q16676 465 aa17.63■□□□□ 0.41
MCM4-208ENST00000519470 UPF1Q92900 1129 aaKnown RBP eCLIP17.63■□□□□ 0.41
MCM4-208ENST00000519470 ORAI2Q96SN7 254 aa17.63■□□□□ 0.41
MCM4-208ENST00000519470 ANKRD30BQ9BXX2 1392 aa17.63■□□□□ 0.41
MCM4-208ENST00000519470 COL22A1Q8NFW1 1626 aaPredicted RBP17.62■□□□□ 0.41
MCM4-208ENST00000519470 KNDC1Q76NI1 1749 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms