RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 DUSP27Q5VZP5 1158 aa10.58□□□□□ -0.72
PCM1-212ENST00000519253 SKAP1Q86WV1 359 aa10.58□□□□□ -0.72
PCM1-212ENST00000519253 CDK13Q14004 1512 aaKnown RBP10.57□□□□□ -0.72
PCM1-212ENST00000519253 FOXD4L1Q9NU39 408 aa10.57□□□□□ -0.72
PCM1-212ENST00000519253 SCAPERQ9BY12 1400 aa10.57□□□□□ -0.72
PCM1-212ENST00000519253 SRPK2P78362 688 aaKnown RBP10.57□□□□□ -0.72
PCM1-212ENST00000519253 CSPP1Q1MSJ5 1256 aa10.57□□□□□ -0.72
PCM1-212ENST00000519253 CIZ1Q9ULV3 898 aaPredicted RBP10.57□□□□□ -0.72
PCM1-212ENST00000519253 PARD3Q8TEW0 1356 aa10.57□□□□□ -0.72
PCM1-212ENST00000519253 SPAG9O60271 1321 aaKnown RBP10.57□□□□□ -0.72
PCM1-212ENST00000519253 PLCB2Q00722 1185 aa10.57□□□□□ -0.72
PCM1-212ENST00000519253 PKNOX2Q96KN3 472 aa10.57□□□□□ -0.72
PCM1-212ENST00000519253 SNAPC4Q5SXM2 1469 aa10.57□□□□□ -0.72
PCM1-212ENST00000519253 ESPNB1AK53 854 aa10.57□□□□□ -0.72
PCM1-212ENST00000519253 NUCB2P80303 420 aa10.57□□□□□ -0.72
PCM1-212ENST00000519253 RALGAPBQ86X10 1494 aa10.56□□□□□ -0.72
PCM1-212ENST00000519253 PRG4Q92954 1404 aaPredicted RBP10.56□□□□□ -0.72
PCM1-212ENST00000519253 GRPEL1Q9HAV7 217 aa10.56□□□□□ -0.72
PCM1-212ENST00000519253 KIF16BQ96L93 1317 aa10.56□□□□□ -0.72
PCM1-212ENST00000519253 PHF14O94880 888 aa10.55□□□□□ -0.72
PCM1-212ENST00000519253 ANKRD45Q5TZF3 282 aa10.55□□□□□ -0.72
PCM1-212ENST00000519253 HDGFL2Q7Z4V5 671 aaPredicted RBP10.55□□□□□ -0.72
PCM1-212ENST00000519253 TCP11L2Q8N4U5 519 aa10.55□□□□□ -0.72
PCM1-212ENST00000519253 CT47B1P0C2W7 299 aaPredicted RBP10.55□□□□□ -0.72
PCM1-212ENST00000519253 NASPP49321 788 aaPredicted RBP10.55□□□□□ -0.72
PCM1-212ENST00000519253 MTERF4Q7Z6M4 381 aaKnown RBP10.55□□□□□ -0.72
PCM1-212ENST00000519253 CCDC173Q0VFZ6 552 aa10.55□□□□□ -0.72
PCM1-212ENST00000519253 C8orf34Q49A92 452 aa10.55□□□□□ -0.72
PCM1-212ENST00000519253 WDR63Q8IWG1 891 aa10.55□□□□□ -0.72
PCM1-212ENST00000519253 TERF2IPQ9NYB0 399 aa10.55□□□□□ -0.72
PCM1-212ENST00000519253 NKTRP30414 1462 aaKnown RBP10.54□□□□□ -0.72
PCM1-212ENST00000519253 KIF3BO15066 747 aa10.54□□□□□ -0.72
PCM1-212ENST00000519253 INSRP06213 1382 aa10.54□□□□□ -0.72
PCM1-212ENST00000519253 PTPRGP23470 1445 aa10.53□□□□□ -0.72
PCM1-212ENST00000519253 SPATA31E1Q6ZUB1 1445 aa10.53□□□□□ -0.72
PCM1-212ENST00000519253 ERCC6Q03468 1493 aa10.53□□□□□ -0.72
PCM1-212ENST00000519253 HMMRO75330 724 aa10.53□□□□□ -0.72
PCM1-212ENST00000519253 CAMSAP2Q08AD1 1489 aa10.53□□□□□ -0.72
PCM1-212ENST00000519253 UNC13AQ9UPW8 1703 aa10.53□□□□□ -0.72
PCM1-212ENST00000519253 LMOD3Q0VAK6 560 aa10.52□□□□□ -0.73
PCM1-212ENST00000519253 TEX14Q8IWB6 1497 aa10.52□□□□□ -0.73
PCM1-212ENST00000519253 TBC1D2Q9BYX2 928 aa10.52□□□□□ -0.73
PCM1-212ENST00000519253 TRAK1Q9UPV9 953 aa10.52□□□□□ -0.73
PCM1-212ENST00000519253 MVPQ14764 893 aaKnown RBP10.51□□□□□ -0.73
PCM1-212ENST00000519253 LNPKQ9C0E8 428 aa10.51□□□□□ -0.73
PCM1-212ENST00000519253 IQGAP2Q13576 1575 aa10.51□□□□□ -0.73
PCM1-212ENST00000519253 PRDM2Q13029 1718 aa10.51□□□□□ -0.73
PCM1-212ENST00000519253 FAM13BQ9NYF5 915 aa10.51□□□□□ -0.73
PCM1-212ENST00000519253 CLCN1P35523 988 aa10.51□□□□□ -0.73
PCM1-212ENST00000519253 REC8O95072 547 aa10.51□□□□□ -0.73
PCM1-212ENST00000519253 KIAA0586Q9BVV6 1533 aa10.51□□□□□ -0.73
PCM1-212ENST00000519253 WWC1Q8IX03 1113 aa10.5□□□□□ -0.73
PCM1-212ENST00000519253 EVC2Q86UK5 1308 aa10.5□□□□□ -0.73
PCM1-212ENST00000519253 TBC1D32Q96NH3 1257 aa10.5□□□□□ -0.73
PCM1-212ENST00000519253 GOLGA6L4A6NEF3 574 aa10.5□□□□□ -0.73
PCM1-212ENST00000519253 CDC45O75419 566 aa10.49□□□□□ -0.73
PCM1-212ENST00000519253 SAFB2Q14151 953 aaKnown RBP eCLIP10.49□□□□□ -0.73
PCM1-212ENST00000519253 ESF1Q9H501 851 aaKnown RBP10.49□□□□□ -0.73
PCM1-212ENST00000519253 GOLGA6L6A8MZA4 724 aa10.49□□□□□ -0.73
PCM1-212ENST00000519253 TPRNQ4KMQ1 711 aa10.49□□□□□ -0.73
PCM1-212ENST00000519253 API5Q9BZZ5 524 aaKnown RBP10.49□□□□□ -0.73
PCM1-212ENST00000519253 APBB1O00213 710 aa10.49□□□□□ -0.73
PCM1-212ENST00000519253 KDM2BQ8NHM5 1336 aa10.49□□□□□ -0.73
PCM1-212ENST00000519253 NESP48681 1621 aa10.49□□□□□ -0.73
PCM1-212ENST00000519253 UHRF1BP1Q6BDS2 1440 aa10.48□□□□□ -0.73
PCM1-212ENST00000519253 ZRSR1Q15695 479 aaKnown RBP10.48□□□□□ -0.73
PCM1-212ENST00000519253 MTHFSP49914 203 aa10.48□□□□□ -0.73
PCM1-212ENST00000519253 NRDCO43847 1150 aa10.48□□□□□ -0.73
PCM1-212ENST00000519253 RARSP54136 660 aaKnown RBP10.48□□□□□ -0.73
PCM1-212ENST00000519253 ARHGEF12Q9NZN5 1544 aa10.48□□□□□ -0.73
PCM1-212ENST00000519253 RABEP1Q15276 862 aa10.47□□□□□ -0.73
PCM1-212ENST00000519253 ZSCAN30Q86W11 494 aa10.47□□□□□ -0.73
PCM1-212ENST00000519253 GCC1Q96CN9 775 aa10.47□□□□□ -0.73
PCM1-212ENST00000519253 ARID3AQ99856 593 aa10.47□□□□□ -0.73
PCM1-212ENST00000519253 CCDC39Q9UFE4 941 aa10.47□□□□□ -0.73
PCM1-212ENST00000519253 PER1O15534 1290 aaPredicted RBP10.47□□□□□ -0.73
PCM1-212ENST00000519253 RIPK4P57078 832 aa10.47□□□□□ -0.73
PCM1-212ENST00000519253 INTS3Q68E01 1043 aaKnown RBP10.47□□□□□ -0.73
PCM1-212ENST00000519253 IGHDP01880 384 aa10.47□□□□□ -0.73
PCM1-212ENST00000519253 MCTP1Q6DN14 999 aa10.47□□□□□ -0.73
PCM1-212ENST00000519253 R3HCC1Q9Y3T6 440 aaKnown RBP10.47□□□□□ -0.73
PCM1-212ENST00000519253 CDK11BP21127 795 aaKnown RBP10.47□□□□□ -0.73
PCM1-212ENST00000519253 K7ELQ4 463 aaPredicted RBP10.46□□□□□ -0.73
PCM1-212ENST00000519253 XRCC6P12956 609 aaKnown RBP eCLIP10.46□□□□□ -0.73
PCM1-212ENST00000519253 MBD3O95983 291 aa10.46□□□□□ -0.73
PCM1-212ENST00000519253 ATF7IPQ6VMQ6 1270 aa10.46□□□□□ -0.73
PCM1-212ENST00000519253 KIAA1211Q6ZU35 1233 aa10.46□□□□□ -0.73
PCM1-212ENST00000519253 DIAPH1O60610 1272 aaKnown RBP10.46□□□□□ -0.74
PCM1-212ENST00000519253 EXOSC9Q06265 439 aaKnown RBP10.46□□□□□ -0.74
PCM1-212ENST00000519253 SENP3Q9H4L4 574 aaPredicted RBP10.45□□□□□ -0.74
PCM1-212ENST00000519253 DISP3Q9P2K9 1392 aa10.45□□□□□ -0.74
PCM1-212ENST00000519253 GGT6Q6P531 493 aa10.45□□□□□ -0.74
PCM1-212ENST00000519253 DRC7Q8IY82 874 aa10.45□□□□□ -0.74
PCM1-212ENST00000519253 STK26Q9P289 416 aa10.45□□□□□ -0.74
PCM1-212ENST00000519253 ATP6V1DQ9Y5K8 247 aa10.45□□□□□ -0.74
PCM1-212ENST00000519253 SYNJ2O15056 1496 aa10.45□□□□□ -0.74
PCM1-212ENST00000519253 CFAP70Q5T0N1 1121 aa10.45□□□□□ -0.74
PCM1-212ENST00000519253 GPRASP1Q5JY77 1395 aa10.44□□□□□ -0.74
PCM1-212ENST00000519253 CWC22Q9HCG8 908 aaKnown RBP10.44□□□□□ -0.74
PCM1-212ENST00000519253 VGFO15240 615 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms